Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00224 and MPMX19_00225 are separated by 200 nucleotides MPMX19_00225 and MPMX19_00226 are separated by 7 nucleotides MPMX19_00226 and MPMX19_00227 are separated by 612 nucleotides
MPMX19_00224: MPMX19_00224 - HTH-type transcriptional regulator GltC, at 226,027 to 226,920
_00224
MPMX19_00225: MPMX19_00225 - hypothetical protein, at 227,121 to 227,657
_00225
MPMX19_00226: MPMX19_00226 - hypothetical protein, at 227,665 to 229,218
_00226
MPMX19_00227: MPMX19_00227 - hypothetical protein, at 229,831 to 231,699
_00227
Position (kb) 227
228
229
230 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 226.706 kb on + strand, within MPMX19_00224 at 226.706 kb on + strand, within MPMX19_00224 at 226.706 kb on + strand, within MPMX19_00224 at 226.707 kb on - strand, within MPMX19_00224 at 226.707 kb on - strand, within MPMX19_00224 at 226.707 kb on - strand, within MPMX19_00224 at 226.927 kb on + strand at 226.927 kb on + strand at 226.927 kb on + strand at 226.928 kb on - strand at 226.961 kb on - strand at 227.013 kb on + strand at 227.013 kb on + strand at 227.013 kb on + strand at 227.013 kb on + strand at 227.014 kb on - strand at 227.014 kb on - strand at 227.352 kb on + strand, within MPMX19_00225 at 227.352 kb on + strand, within MPMX19_00225 at 227.352 kb on + strand, within MPMX19_00225 at 227.352 kb on + strand, within MPMX19_00225 at 227.352 kb on + strand, within MPMX19_00225 at 227.352 kb on + strand, within MPMX19_00225 at 227.352 kb on + strand, within MPMX19_00225 at 227.352 kb on + strand, within MPMX19_00225 at 227.353 kb on - strand, within MPMX19_00225 at 227.353 kb on - strand, within MPMX19_00225 at 227.353 kb on - strand, within MPMX19_00225 at 227.353 kb on - strand, within MPMX19_00225 at 227.353 kb on - strand, within MPMX19_00225 at 227.487 kb on + strand, within MPMX19_00225 at 227.487 kb on + strand, within MPMX19_00225 at 227.488 kb on - strand, within MPMX19_00225 at 227.526 kb on + strand, within MPMX19_00225 at 227.526 kb on + strand, within MPMX19_00225 at 227.526 kb on + strand, within MPMX19_00225 at 227.527 kb on - strand, within MPMX19_00225 at 227.527 kb on - strand, within MPMX19_00225 at 227.553 kb on + strand, within MPMX19_00225 at 227.553 kb on + strand, within MPMX19_00225 at 227.553 kb on + strand, within MPMX19_00225 at 227.553 kb on + strand, within MPMX19_00225 at 227.554 kb on - strand, within MPMX19_00225 at 227.554 kb on - strand, within MPMX19_00225 at 227.554 kb on - strand, within MPMX19_00225 at 227.554 kb on - strand, within MPMX19_00225 at 227.554 kb on - strand, within MPMX19_00225 at 227.554 kb on - strand, within MPMX19_00225 at 227.554 kb on - strand, within MPMX19_00225 at 227.554 kb on - strand, within MPMX19_00225 at 227.554 kb on - strand, within MPMX19_00225 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.822 kb on + strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 227.823 kb on - strand, within MPMX19_00226 at 228.110 kb on + strand, within MPMX19_00226 at 228.111 kb on - strand, within MPMX19_00226 at 228.111 kb on - strand, within MPMX19_00226 at 228.111 kb on - strand, within MPMX19_00226 at 228.176 kb on + strand, within MPMX19_00226 at 228.177 kb on - strand, within MPMX19_00226 at 228.347 kb on + strand, within MPMX19_00226 at 228.348 kb on - strand, within MPMX19_00226 at 228.348 kb on - strand, within MPMX19_00226 at 228.348 kb on - strand, within MPMX19_00226 at 228.824 kb on + strand, within MPMX19_00226 at 229.093 kb on + strand at 229.093 kb on + strand at 229.094 kb on - strand at 229.272 kb on + strand at 229.272 kb on + strand at 229.272 kb on + strand at 229.272 kb on + strand at 229.272 kb on + strand at 229.272 kb on + strand at 229.272 kb on + strand at 229.272 kb on + strand at 229.272 kb on + strand at 229.272 kb on + strand at 229.272 kb on + strand at 229.272 kb on + strand at 229.272 kb on + strand at 229.272 kb on + strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.273 kb on - strand at 229.274 kb on + strand at 229.274 kb on + strand at 229.275 kb on - strand at 229.275 kb on - strand at 229.275 kb on - strand at 229.295 kb on + strand at 229.296 kb on - strand at 229.422 kb on + strand at 229.422 kb on + strand at 229.422 kb on + strand at 229.422 kb on + strand at 229.422 kb on + strand at 229.422 kb on + strand at 229.422 kb on + strand at 229.422 kb on + strand at 229.422 kb on + strand at 229.422 kb on + strand at 229.422 kb on + strand at 229.422 kb on + strand at 229.476 kb on + strand at 229.477 kb on - strand at 229.477 kb on - strand at 229.477 kb on - strand at 229.477 kb on - strand at 229.529 kb on + strand at 229.529 kb on + strand at 229.529 kb on + strand at 229.529 kb on + strand at 229.529 kb on + strand at 229.529 kb on + strand at 229.529 kb on + strand at 229.529 kb on + strand at 229.529 kb on + strand at 229.530 kb on - strand at 229.530 kb on - strand at 229.530 kb on - strand at 229.530 kb on - strand at 229.530 kb on - strand at 229.530 kb on - strand at 229.561 kb on + strand at 229.561 kb on + strand at 229.561 kb on + strand at 229.562 kb on - strand at 229.616 kb on + strand at 229.616 kb on + strand at 229.616 kb on + strand at 229.616 kb on + strand at 229.616 kb on + strand at 229.738 kb on + strand at 229.738 kb on + strand at 229.738 kb on + strand at 229.738 kb on + strand at 229.782 kb on + strand at 229.782 kb on + strand at 229.782 kb on + strand at 229.782 kb on + strand at 229.782 kb on + strand at 229.782 kb on + strand at 229.782 kb on + strand at 229.782 kb on + strand at 229.782 kb on + strand at 229.782 kb on + strand at 229.782 kb on + strand at 229.782 kb on + strand at 229.984 kb on + strand at 229.984 kb on + strand at 229.984 kb on + strand at 230.032 kb on + strand, within MPMX19_00227 at 230.032 kb on + strand, within MPMX19_00227 at 230.032 kb on + strand, within MPMX19_00227 at 230.032 kb on + strand, within MPMX19_00227 at 230.032 kb on + strand, within MPMX19_00227 at 230.032 kb on + strand, within MPMX19_00227 at 230.032 kb on + strand, within MPMX19_00227 at 230.032 kb on + strand, within MPMX19_00227 at 230.032 kb on + strand, within MPMX19_00227 at 230.032 kb on + strand, within MPMX19_00227 at 230.032 kb on + strand, within MPMX19_00227 at 230.032 kb on + strand, within MPMX19_00227 at 230.032 kb on + strand, within MPMX19_00227 at 230.032 kb on + strand, within MPMX19_00227 at 230.032 kb on + strand, within MPMX19_00227 at 230.033 kb on - strand, within MPMX19_00227 at 230.161 kb on + strand, within MPMX19_00227 at 230.161 kb on + strand, within MPMX19_00227 at 230.161 kb on + strand, within MPMX19_00227 at 230.161 kb on + strand, within MPMX19_00227 at 230.161 kb on + strand, within MPMX19_00227 at 230.162 kb on - strand, within MPMX19_00227 at 230.162 kb on - strand, within MPMX19_00227
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 226,706 + MPMX19_00224 0.76 -0.5 226,706 + MPMX19_00224 0.76 +1.1 226,706 + MPMX19_00224 0.76 +1.5 226,707 - MPMX19_00224 0.76 +1.5 226,707 - MPMX19_00224 0.76 -0.0 226,707 - MPMX19_00224 0.76 -1.1 226,927 + -1.5 226,927 + -0.7 226,927 + -1.5 226,928 - +0.4 226,961 - +0.9 227,013 + -0.5 227,013 + -0.9 227,013 + -1.4 227,013 + -0.5 227,014 - -1.2 227,014 - -0.2 227,352 + MPMX19_00225 0.43 -0.0 227,352 + MPMX19_00225 0.43 -1.5 227,352 + MPMX19_00225 0.43 -0.1 227,352 + MPMX19_00225 0.43 -0.5 227,352 + MPMX19_00225 0.43 +1.1 227,352 + MPMX19_00225 0.43 -1.7 227,352 + MPMX19_00225 0.43 -1.5 227,352 + MPMX19_00225 0.43 +0.2 227,353 - MPMX19_00225 0.43 -0.5 227,353 - MPMX19_00225 0.43 -0.2 227,353 - MPMX19_00225 0.43 -0.1 227,353 - MPMX19_00225 0.43 -0.9 227,353 - MPMX19_00225 0.43 -1.0 227,487 + MPMX19_00225 0.68 +0.7 227,487 + MPMX19_00225 0.68 +0.2 227,488 - MPMX19_00225 0.68 -0.9 227,526 + MPMX19_00225 0.75 -0.1 227,526 + MPMX19_00225 0.75 +0.6 227,526 + MPMX19_00225 0.75 +0.1 227,527 - MPMX19_00225 0.76 +0.6 227,527 - MPMX19_00225 0.76 -1.4 227,553 + MPMX19_00225 0.80 +2.0 227,553 + MPMX19_00225 0.80 -0.2 227,553 + MPMX19_00225 0.80 -0.4 227,553 + MPMX19_00225 0.80 -1.2 227,554 - MPMX19_00225 0.81 +0.9 227,554 - MPMX19_00225 0.81 -1.5 227,554 - MPMX19_00225 0.81 -0.1 227,554 - MPMX19_00225 0.81 +1.1 227,554 - MPMX19_00225 0.81 -1.1 227,554 - MPMX19_00225 0.81 -0.8 227,554 - MPMX19_00225 0.81 -0.9 227,554 - MPMX19_00225 0.81 +0.1 227,554 - MPMX19_00225 0.81 -2.1 227,822 + MPMX19_00226 0.10 -1.7 227,822 + MPMX19_00226 0.10 -1.2 227,822 + MPMX19_00226 0.10 -0.5 227,822 + MPMX19_00226 0.10 +0.1 227,822 + MPMX19_00226 0.10 -0.5 227,822 + MPMX19_00226 0.10 -0.1 227,822 + MPMX19_00226 0.10 +1.2 227,822 + MPMX19_00226 0.10 -0.1 227,822 + MPMX19_00226 0.10 -0.4 227,822 + MPMX19_00226 0.10 +0.3 227,822 + MPMX19_00226 0.10 +0.6 227,822 + MPMX19_00226 0.10 +0.3 227,822 + MPMX19_00226 0.10 -1.6 227,822 + MPMX19_00226 0.10 -2.1 227,822 + MPMX19_00226 0.10 -0.5 227,822 + MPMX19_00226 0.10 -1.0 227,822 + MPMX19_00226 0.10 -0.5 227,822 + MPMX19_00226 0.10 -0.2 227,822 + MPMX19_00226 0.10 -2.6 227,822 + MPMX19_00226 0.10 -0.4 227,822 + MPMX19_00226 0.10 -0.5 227,822 + MPMX19_00226 0.10 -1.4 227,822 + MPMX19_00226 0.10 -0.2 227,823 - MPMX19_00226 0.10 -2.5 227,823 - MPMX19_00226 0.10 -1.0 227,823 - MPMX19_00226 0.10 -1.0 227,823 - MPMX19_00226 0.10 -2.2 227,823 - MPMX19_00226 0.10 -0.4 227,823 - MPMX19_00226 0.10 +1.1 227,823 - MPMX19_00226 0.10 -1.5 227,823 - MPMX19_00226 0.10 -1.1 227,823 - MPMX19_00226 0.10 -1.1 227,823 - MPMX19_00226 0.10 +0.3 227,823 - MPMX19_00226 0.10 -0.8 227,823 - MPMX19_00226 0.10 -0.9 227,823 - MPMX19_00226 0.10 -0.7 227,823 - MPMX19_00226 0.10 +0.3 227,823 - MPMX19_00226 0.10 -1.4 227,823 - MPMX19_00226 0.10 -1.5 227,823 - MPMX19_00226 0.10 -1.2 228,110 + MPMX19_00226 0.29 -0.2 228,111 - MPMX19_00226 0.29 -0.0 228,111 - MPMX19_00226 0.29 -0.1 228,111 - MPMX19_00226 0.29 -0.9 228,176 + MPMX19_00226 0.33 -0.9 228,177 - MPMX19_00226 0.33 -0.7 228,347 + MPMX19_00226 0.44 -0.5 228,348 - MPMX19_00226 0.44 -0.7 228,348 - MPMX19_00226 0.44 -0.2 228,348 - MPMX19_00226 0.44 -1.4 228,824 + MPMX19_00226 0.75 -0.4 229,093 + +0.5 229,093 + -1.2 229,094 - -0.4 229,272 + -2.5 229,272 + -2.8 229,272 + -0.1 229,272 + +1.1 229,272 + -2.5 229,272 + +0.9 229,272 + -1.6 229,272 + +0.8 229,272 + -0.9 229,272 + +0.1 229,272 + -2.1 229,272 + -0.5 229,272 + +1.9 229,272 + -1.9 229,273 - -1.0 229,273 - -1.8 229,273 - -1.5 229,273 - -0.5 229,273 - -0.7 229,273 - -1.4 229,273 - -1.0 229,273 - -0.4 229,273 - -0.7 229,273 - -0.0 229,273 - -0.7 229,273 - -1.2 229,273 - -0.4 229,273 - -2.0 229,273 - -1.5 229,273 - -2.1 229,273 - -0.5 229,273 - -1.7 229,274 + -1.1 229,274 + -1.1 229,275 - -1.1 229,275 - -0.2 229,275 - -0.5 229,295 + -1.2 229,296 - -0.9 229,422 + -1.1 229,422 + -2.1 229,422 + -1.9 229,422 + -1.4 229,422 + -2.3 229,422 + -0.1 229,422 + +0.6 229,422 + -1.4 229,422 + -1.2 229,422 + +0.5 229,422 + -0.4 229,422 + -2.4 229,476 + -1.2 229,477 - -0.1 229,477 - -2.2 229,477 - -1.2 229,477 - -1.0 229,529 + -0.5 229,529 + -1.0 229,529 + +1.1 229,529 + -0.0 229,529 + +0.1 229,529 + -1.4 229,529 + -0.8 229,529 + +1.3 229,529 + -0.5 229,530 - -1.4 229,530 - -1.7 229,530 - -0.1 229,530 - -0.5 229,530 - -1.2 229,530 - -1.6 229,561 + -1.1 229,561 + -0.3 229,561 + -1.7 229,562 - +0.7 229,616 + -0.5 229,616 + -0.1 229,616 + +0.1 229,616 + -0.4 229,616 + -1.0 229,738 + +0.2 229,738 + -0.0 229,738 + -0.1 229,738 + -0.2 229,782 + +0.1 229,782 + -0.4 229,782 + +0.5 229,782 + +0.6 229,782 + -0.1 229,782 + -0.7 229,782 + -0.8 229,782 + -1.5 229,782 + -0.4 229,782 + -0.1 229,782 + +1.3 229,782 + -0.1 229,984 + -0.1 229,984 + -1.5 229,984 + -1.4 230,032 + MPMX19_00227 0.11 -0.1 230,032 + MPMX19_00227 0.11 +0.3 230,032 + MPMX19_00227 0.11 -0.1 230,032 + MPMX19_00227 0.11 -1.4 230,032 + MPMX19_00227 0.11 -0.7 230,032 + MPMX19_00227 0.11 -1.2 230,032 + MPMX19_00227 0.11 -0.5 230,032 + MPMX19_00227 0.11 -1.7 230,032 + MPMX19_00227 0.11 -2.3 230,032 + MPMX19_00227 0.11 -0.8 230,032 + MPMX19_00227 0.11 -0.5 230,032 + MPMX19_00227 0.11 -1.5 230,032 + MPMX19_00227 0.11 -0.0 230,032 + MPMX19_00227 0.11 -0.1 230,032 + MPMX19_00227 0.11 -0.5 230,033 - MPMX19_00227 0.11 -1.2 230,161 + MPMX19_00227 0.18 -0.7 230,161 + MPMX19_00227 0.18 -0.5 230,161 + MPMX19_00227 0.18 +0.6 230,161 + MPMX19_00227 0.18 -0.5 230,161 + MPMX19_00227 0.18 -2.3 230,162 - MPMX19_00227 0.18 +0.2 230,162 - MPMX19_00227 0.18 -1.0
Or see this region's nucleotide sequence