Strain Fitness in Acinetobacter baumannii LAC-4 around RR41_RS18560

Experiment: RPMI_TSB_serum temperature; 30C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RPMI_TSB_serum temperature; 30C
3,859,482	+				+1.2
3,859,483	-				-1.0
3,859,483	-				-1.2
3,859,485	-				-4.5
3,859,485	-				-3.4
3,859,485	-				-0.2
3,859,487	+				-1.2
3,859,487	+				-0.9
3,859,497	-				-0.9
3,859,505	+				+0.4
3,859,564	+				-2.8
3,859,568	-				+1.4
3,859,568	-				-1.5
3,859,568	-				-2.5
3,859,573	+				-2.0
3,859,574	-				-1.1
3,859,574	-				+0.6
3,859,574	-				-1.0
3,859,663	+		RR41_RS18555	0.17	+1.3
3,859,663	+		RR41_RS18555	0.17	-0.1
3,859,663	+		RR41_RS18555	0.17	+1.1
3,859,664	-		RR41_RS18555	0.17	+0.4
3,859,664	-		RR41_RS18555	0.17	-0.2
3,859,668	+		RR41_RS18555	0.17	+0.2
3,859,672	+		RR41_RS18555	0.18	+1.8
3,859,672	+		RR41_RS18555	0.18	-1.2
3,859,675	-		RR41_RS18555	0.18	-0.2
3,859,675	-		RR41_RS18555	0.18	+1.6
3,859,707	+		RR41_RS18555	0.21	-1.2
3,859,707	+		RR41_RS18555	0.21	-1.6
3,859,707	+		RR41_RS18555	0.21	+0.5
3,859,708	-		RR41_RS18555	0.21	+1.4
3,859,711	+		RR41_RS18555	0.22	+0.3
3,859,732	-		RR41_RS18555	0.24	-0.6
3,859,738	+		RR41_RS18555	0.25	-0.8
3,859,739	-		RR41_RS18555	0.25	+2.1
3,859,739	-		RR41_RS18555	0.25	-0.4
3,859,739	-		RR41_RS18555	0.25	-3.7
3,859,740	+		RR41_RS18555	0.25	-1.2
3,859,740	+		RR41_RS18555	0.25	+0.4
3,859,741	-		RR41_RS18555	0.25	-2.8
3,859,755	+		RR41_RS18555	0.26	-0.9
3,859,827	+		RR41_RS18555	0.34	+3.2
3,859,827	+		RR41_RS18555	0.34	+2.0
3,859,845	+		RR41_RS18555	0.36	+0.3
3,859,900	-		RR41_RS18555	0.42	-2.2
3,859,931	+		RR41_RS18555	0.45	+0.3
3,859,932	-		RR41_RS18555	0.45	-1.4
3,859,988	-		RR41_RS18555	0.51	-2.2
3,860,009	+		RR41_RS18555	0.54	-1.2
3,860,009	+		RR41_RS18555	0.54	-0.5
3,860,009	+		RR41_RS18555	0.54	+0.8
3,860,010	-		RR41_RS18555	0.54	-2.2
3,860,037	+		RR41_RS18555	0.57	+0.3
3,860,042	-		RR41_RS18555	0.57	+2.0
3,860,044	-		RR41_RS18555	0.57	-0.2
3,860,046	+		RR41_RS18555	0.58	-0.2
3,860,047	-		RR41_RS18555	0.58	-1.2
3,860,062	-		RR41_RS18555	0.59	-0.2
3,860,069	-		RR41_RS18555	0.60	-0.8
3,860,098	-		RR41_RS18555	0.63	+0.8
3,860,100	+		RR41_RS18555	0.63	+0.1
3,860,100	+		RR41_RS18555	0.63	-0.8
3,860,101	-		RR41_RS18555	0.63	+0.3
3,860,104	-		RR41_RS18555	0.64	-2.8
3,860,109	+		RR41_RS18555	0.64	+1.0
3,860,110	-		RR41_RS18555	0.64	+1.4
3,860,110	-		RR41_RS18555	0.64	-0.8
3,860,114	-		RR41_RS18555	0.65	+0.8
3,860,114	-		RR41_RS18555	0.65	-0.0
3,860,137	-		RR41_RS18555	0.67	-0.8
3,860,171	-		RR41_RS18555	0.71	+0.0
3,860,171	-		RR41_RS18555	0.71	-2.5
3,860,176	+		RR41_RS18555	0.71	+0.8
3,860,176	+		RR41_RS18555	0.71	-1.2
3,860,176	+		RR41_RS18555	0.71	+1.4
3,860,177	-		RR41_RS18555	0.72	+0.4
3,860,184	+		RR41_RS18555	0.72	-2.2
3,860,190	+		RR41_RS18555	0.73	+0.4
3,860,190	+		RR41_RS18555	0.73	-1.3
3,860,191	-		RR41_RS18555	0.73	-1.2
3,860,191	-		RR41_RS18555	0.73	-1.6
3,860,191	-		RR41_RS18555	0.73	-1.8
3,860,194	+		RR41_RS18555	0.73	+1.1
3,860,221	-		RR41_RS18555	0.76	-1.0
3,860,221	-		RR41_RS18555	0.76	+0.5
3,860,221	-		RR41_RS18555	0.76	+1.2
3,860,223	+		RR41_RS18555	0.76	-1.2
3,860,224	-		RR41_RS18555	0.77	+0.4
3,860,257	+		RR41_RS18555	0.80	+0.1
3,860,257	+		RR41_RS18555	0.80	-2.2
3,860,258	-		RR41_RS18555	0.80	-1.4
3,860,258	-		RR41_RS18555	0.80	-1.2
3,860,281	+		RR41_RS18555	0.83	-2.0
3,860,282	-		RR41_RS18555	0.83	-1.2
3,860,282	-		RR41_RS18555	0.83	-0.2
3,860,282	-		RR41_RS18555	0.83	-2.5
3,860,293	+		RR41_RS18555	0.84	+0.2
3,860,293	+		RR41_RS18555	0.84	-2.8
3,860,294	-		RR41_RS18555	0.84	-1.2
3,860,294	-		RR41_RS18555	0.84	-0.2
3,860,295	+		RR41_RS18555	0.84	+3.6
3,860,314	+		RR41_RS18555	0.86	-0.9
3,860,315	-		RR41_RS18555	0.86	-0.2
3,860,323	-		RR41_RS18555	0.87	-0.2
3,860,323	-		RR41_RS18555	0.87	-2.2
3,860,327	-		RR41_RS18555	0.88	-1.2
3,860,338	-		RR41_RS18555	0.89	-0.2
3,860,343	+		RR41_RS18555	0.89	-1.8
3,860,364	+				-1.8
3,860,364	+				-2.5
3,860,364	+				-2.5
3,860,365	-				+1.1
3,860,365	-				-2.5
3,860,366	+				-0.8
3,860,367	-				+2.4
3,860,367	-				+0.8
3,860,367	-				+0.3
3,860,388	-				-0.2
3,860,395	+				+1.4
3,860,396	-				+1.0
3,860,396	-				-1.2
3,860,400	-				+1.0
3,860,419	-				+0.3
3,860,461	-				-1.3
3,860,477	-				+1.2
3,860,611	+		RR41_RS18560	0.13	-2.2
3,860,611	+		RR41_RS18560	0.13	-1.8
3,860,611	+		RR41_RS18560	0.13	-2.5
3,860,642	-		RR41_RS18560	0.15	-1.8
3,860,677	+		RR41_RS18560	0.18	-2.4
3,860,678	-		RR41_RS18560	0.18	-3.2
3,860,726	-		RR41_RS18560	0.22	+1.4
3,860,726	-		RR41_RS18560	0.22	-1.2
3,860,741	+		RR41_RS18560	0.24	-0.9
3,860,742	-		RR41_RS18560	0.24	-0.2
3,860,786	+		RR41_RS18560	0.28	-0.2
3,860,881	-		RR41_RS18560	0.36	-0.2
3,860,922	+		RR41_RS18560	0.39	-0.2
3,860,966	+		RR41_RS18560	0.43	-3.7
3,860,978	-		RR41_RS18560	0.44	-1.2
3,861,001	+		RR41_RS18560	0.46	-2.5
3,861,104	-		RR41_RS18560	0.54	+1.4
3,861,104	-		RR41_RS18560	0.54	-1.2
3,861,131	+		RR41_RS18560	0.57	-1.2
3,861,135	-		RR41_RS18560	0.57	-2.2
3,861,184	-		RR41_RS18560	0.61	-1.8
3,861,244	+		RR41_RS18560	0.66	-0.2
3,861,269	+		RR41_RS18560	0.68	-3.0
3,861,284	+		RR41_RS18560	0.69	-1.2
3,861,285	-		RR41_RS18560	0.70	-0.2
3,861,288	-		RR41_RS18560	0.70	-3.2
3,861,358	+		RR41_RS18560	0.76	-3.0
3,861,371	-		RR41_RS18560	0.77	-1.8
3,861,476	-		RR41_RS18560	0.86	-1.2
3,861,478	+		RR41_RS18560	0.86	-2.5
3,861,540	-				-0.2
3,861,540	-				+1.8
3,861,542	-				-0.2
3,861,585	+				-1.8
3,861,586	-				-3.0
3,861,586	-				-3.2
3,861,595	+				-2.5
3,861,616	-				-1.2
3,861,661	+				-0.2
3,861,662	-				-1.2
3,861,662	-				+0.3
3,861,741	-				-2.8
3,862,192	+		RR41_RS18565	0.47	-1.5
3,862,297	-		RR41_RS18565	0.57	-1.8
3,862,354	-		RR41_RS18565	0.62	-1.8
3,862,361	+		RR41_RS18565	0.62	-0.2