Strain Fitness in Acinetobacter baumannii LAC-4 around RR41_RS17095

Experiment: RPMI_TSB_serum temperature; 30C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RPMI_TSB_serum temperature; 30C
3,549,601	-		RR41_RS17090	0.16	-2.4
3,549,680	+		RR41_RS17090	0.24	-1.9
3,549,681	-		RR41_RS17090	0.24	+0.5
3,549,745	-		RR41_RS17090	0.30	-0.1
3,549,745	-		RR41_RS17090	0.30	-0.4
3,549,749	-		RR41_RS17090	0.31	+0.5
3,549,783	+		RR41_RS17090	0.34	-3.2
3,549,799	-		RR41_RS17090	0.36	-0.1
3,549,799	-		RR41_RS17090	0.36	-1.1
3,549,895	+		RR41_RS17090	0.45	+1.3
3,549,895	+		RR41_RS17090	0.45	-2.4
3,549,901	+		RR41_RS17090	0.46	+1.9
3,549,979	-		RR41_RS17090	0.53	-2.4
3,549,981	-		RR41_RS17090	0.54	+0.3
3,549,981	-		RR41_RS17090	0.54	-1.1
3,549,981	-		RR41_RS17090	0.54	-1.7
3,549,995	-		RR41_RS17090	0.55	+0.2
3,550,003	-		RR41_RS17090	0.56	-1.2
3,550,003	-		RR41_RS17090	0.56	+0.2
3,550,003	-		RR41_RS17090	0.56	+0.9
3,550,003	-		RR41_RS17090	0.56	-0.5
3,550,007	-		RR41_RS17090	0.56	+1.0
3,550,069	+		RR41_RS17090	0.62	-0.1
3,550,069	+		RR41_RS17090	0.62	+0.2
3,550,069	+		RR41_RS17090	0.62	+2.9
3,550,070	-		RR41_RS17090	0.62	-2.9
3,550,104	+		RR41_RS17090	0.66	-0.4
3,550,126	+		RR41_RS17090	0.68	+0.7
3,550,126	+		RR41_RS17090	0.68	-1.5
3,550,127	-		RR41_RS17090	0.68	-2.1
3,550,127	-		RR41_RS17090	0.68	-0.1
3,550,127	-		RR41_RS17090	0.68	-0.1
3,550,127	-		RR41_RS17090	0.68	+0.3
3,550,132	+		RR41_RS17090	0.69	-0.3
3,550,132	+		RR41_RS17090	0.69	-1.3
3,550,132	+		RR41_RS17090	0.69	+2.3
3,550,133	-		RR41_RS17090	0.69	-1.1
3,550,133	-		RR41_RS17090	0.69	-1.1
3,550,161	+		RR41_RS17090	0.72	+0.7
3,550,161	+		RR41_RS17090	0.72	-2.1
3,550,162	-		RR41_RS17090	0.72	+1.3
3,550,165	+		RR41_RS17090	0.72	+0.9
3,550,165	+		RR41_RS17090	0.72	-0.1
3,550,166	-		RR41_RS17090	0.72	-1.4
3,550,189	+		RR41_RS17090	0.74	-0.5
3,550,190	-		RR41_RS17090	0.74	+0.2
3,550,190	-		RR41_RS17090	0.74	-1.4
3,550,190	-		RR41_RS17090	0.74	-2.1
3,550,196	+		RR41_RS17090	0.75	+0.5
3,550,197	-		RR41_RS17090	0.75	-1.1
3,550,202	+		RR41_RS17090	0.76	-3.7
3,550,247	+		RR41_RS17090	0.80	-2.2
3,550,274	+		RR41_RS17090	0.83	-1.1
3,550,274	+		RR41_RS17090	0.83	+1.7
3,550,275	-		RR41_RS17090	0.83	-3.4
3,550,326	+		RR41_RS17090	0.88	+0.1
3,550,326	+		RR41_RS17090	0.88	-0.3
3,550,329	-		RR41_RS17090	0.88	-2.4
3,550,333	+		RR41_RS17090	0.89	+0.7
3,550,446	+				-2.4
3,550,447	-				+0.9
3,550,447	-				+1.7
3,550,528	+				-0.1
3,550,555	+				-0.3
3,550,556	-				-2.1
3,550,610	+				+2.3
3,550,611	-				-0.1
3,550,611	-				-3.1
3,550,629	+				-1.7
3,550,643	+				-2.1
3,550,646	+				-2.9
3,550,646	+				-0.1
3,550,653	+		RR41_RS17095	0.10	-1.1
3,550,653	+		RR41_RS17095	0.10	-1.1
3,550,653	+		RR41_RS17095	0.10	-1.7
3,550,653	+		RR41_RS17095	0.10	-1.7
3,550,654	-		RR41_RS17095	0.10	-2.4
3,550,654	-		RR41_RS17095	0.10	-1.7
3,550,654	-		RR41_RS17095	0.10	-0.8
3,550,654	-		RR41_RS17095	0.10	-0.1
3,550,654	-		RR41_RS17095	0.10	-1.1
3,550,654	-		RR41_RS17095	0.10	-2.1
3,550,657	+		RR41_RS17095	0.10	+2.3
3,550,657	+		RR41_RS17095	0.10	-2.9
3,550,658	-		RR41_RS17095	0.11	-1.7
3,550,667	+		RR41_RS17095	0.12	-2.7
3,550,668	-		RR41_RS17095	0.12	+0.5
3,550,668	-		RR41_RS17095	0.12	-0.1
3,550,698	+		RR41_RS17095	0.15	-0.1
3,550,698	+		RR41_RS17095	0.15	-2.4
3,550,698	+		RR41_RS17095	0.15	-2.1
3,550,698	+		RR41_RS17095	0.15	-3.1
3,550,699	-		RR41_RS17095	0.15	-1.1
3,550,699	-		RR41_RS17095	0.15	-0.1
3,550,699	-		RR41_RS17095	0.15	-3.1
3,550,699	-		RR41_RS17095	0.15	-1.7
3,550,716	+		RR41_RS17095	0.17	-2.7
3,550,717	-		RR41_RS17095	0.17	-1.7
3,550,794	-		RR41_RS17095	0.26	-2.1
3,550,804	-		RR41_RS17095	0.27	-2.1
3,550,821	-		RR41_RS17095	0.29	-0.1
3,550,821	-		RR41_RS17095	0.29	-2.4
3,550,838	-		RR41_RS17095	0.31	-1.1
3,550,838	-		RR41_RS17095	0.31	-0.1
3,550,867	-		RR41_RS17095	0.35	-1.1
3,550,878	+		RR41_RS17095	0.36	-1.7
3,550,879	-		RR41_RS17095	0.36	-2.4
3,550,879	-		RR41_RS17095	0.36	-2.7
3,550,887	+		RR41_RS17095	0.37	-2.1
3,550,887	+		RR41_RS17095	0.37	-2.7
3,550,921	-		RR41_RS17095	0.41	-0.1
3,550,929	+		RR41_RS17095	0.42	-3.4
3,550,930	-		RR41_RS17095	0.42	-0.1
3,550,962	-		RR41_RS17095	0.46	-3.2
3,551,022	-		RR41_RS17095	0.53	-2.4
3,551,022	-		RR41_RS17095	0.53	-4.0
3,551,038	-		RR41_RS17095	0.54	-1.7
3,551,052	-		RR41_RS17095	0.56	-1.1
3,551,052	-		RR41_RS17095	0.56	-1.7
3,551,052	-		RR41_RS17095	0.56	+1.9
3,551,064	+		RR41_RS17095	0.57	-1.1
3,551,068	-		RR41_RS17095	0.58	-2.7
3,551,080	-		RR41_RS17095	0.59	-2.4
3,551,110	+		RR41_RS17095	0.63	-2.7
3,551,110	+		RR41_RS17095	0.63	-1.1
3,551,111	-		RR41_RS17095	0.63	-1.7
3,551,111	-		RR41_RS17095	0.63	+1.5
3,551,119	+		RR41_RS17095	0.64	-2.9
3,551,120	-		RR41_RS17095	0.64	+0.7
3,551,130	+		RR41_RS17095	0.65	-1.1
3,551,144	+		RR41_RS17095	0.67	-2.7
3,551,162	+		RR41_RS17095	0.69	-0.1
3,551,163	-		RR41_RS17095	0.69	-1.7
3,551,169	+		RR41_RS17095	0.70	-0.1
3,551,170	-		RR41_RS17095	0.70	-1.7
3,551,197	+		RR41_RS17095	0.73	-1.1
3,551,266	+		RR41_RS17095	0.81	-0.1
3,551,266	+		RR41_RS17095	0.81	-2.4
3,551,267	-		RR41_RS17095	0.81	-1.7
3,551,267	-		RR41_RS17095	0.81	-2.4
3,551,267	-		RR41_RS17095	0.81	+1.5
3,551,267	-		RR41_RS17095	0.81	-1.1
3,551,267	-		RR41_RS17095	0.81	-1.7
3,551,267	-		RR41_RS17095	0.81	-0.1
3,551,285	-		RR41_RS17095	0.83	-2.4
3,551,285	-		RR41_RS17095	0.83	-1.9
3,551,286	+		RR41_RS17095	0.83	-0.5
3,551,286	+		RR41_RS17095	0.83	-2.7
3,551,287	-		RR41_RS17095	0.83	-1.1
3,551,287	-		RR41_RS17095	0.83	-1.7
3,551,287	-		RR41_RS17095	0.83	-1.7
3,551,287	-		RR41_RS17095	0.83	-1.7
3,551,287	-		RR41_RS17095	0.83	-2.4
3,551,287	-		RR41_RS17095	0.83	-0.1
3,551,291	+		RR41_RS17095	0.84	-1.7
3,551,291	+		RR41_RS17095	0.84	-3.1
3,551,292	-		RR41_RS17095	0.84	+2.9
3,551,292	-		RR41_RS17095	0.84	-2.1
3,551,308	+		RR41_RS17095	0.86	-2.1
3,551,336	+		RR41_RS17095	0.89	-2.9
3,551,336	+		RR41_RS17095	0.89	-2.4
3,551,336	+		RR41_RS17095	0.89	-0.1
3,551,337	-		RR41_RS17095	0.89	-1.7
3,551,337	-		RR41_RS17095	0.89	-2.7
3,551,337	-		RR41_RS17095	0.89	-0.1
3,551,393	+				-1.1
3,551,393	+				-3.7
3,551,393	+				-1.1
3,551,394	-				-1.1
3,551,400	+				+0.2
3,551,400	+				-2.9
3,551,400	+				-2.1
3,551,401	-				-0.1
3,551,412	+				-0.3
3,551,421	+				-2.2
3,551,421	+				-1.0
3,551,422	-				-1.2
3,551,441	+				-4.7
3,551,467	-				-1.3
3,551,475	+				-2.4
3,551,507	+				+1.7
3,551,564	-		RR41_RS17100	0.14	-0.1
3,551,564	-		RR41_RS17100	0.14	-1.4
3,551,579	-		RR41_RS17100	0.16	-2.1
3,551,579	-		RR41_RS17100	0.16	+1.8
3,551,609	+		RR41_RS17100	0.21	-2.4
3,551,610	-		RR41_RS17100	0.21	-3.2
3,551,629	+		RR41_RS17100	0.24	-1.1
3,551,629	+		RR41_RS17100	0.24	+1.5
3,551,629	+		RR41_RS17100	0.24	-0.1
3,551,630	-		RR41_RS17100	0.24	+0.9
3,551,630	-		RR41_RS17100	0.24	-1.7
3,551,630	-		RR41_RS17100	0.24	-0.1
3,551,630	-		RR41_RS17100	0.24	-1.2
3,551,630	-		RR41_RS17100	0.24	-0.8
3,551,630	-		RR41_RS17100	0.24	-0.4
3,551,630	-		RR41_RS17100	0.24	+0.3
3,551,650	+		RR41_RS17100	0.28	-0.1
3,551,651	-		RR41_RS17100	0.28	-0.2
3,551,679	-		RR41_RS17100	0.32	-0.3
3,551,679	-		RR41_RS17100	0.32	+0.9
3,551,718	+		RR41_RS17100	0.39	+1.3
3,551,719	-		RR41_RS17100	0.39	-1.9
3,551,752	-		RR41_RS17100	0.44	-1.1
3,551,766	+		RR41_RS17100	0.47	-2.2
3,551,767	-		RR41_RS17100	0.47	-1.1
3,551,802	+		RR41_RS17100	0.52	-1.1
3,551,819	-		RR41_RS17100	0.55	-2.9
3,551,852	+		RR41_RS17100	0.61	-0.7
3,551,997	+		RR41_RS17100	0.84	+0.5
3,551,997	+		RR41_RS17100	0.84	-0.1
3,551,998	-		RR41_RS17100	0.84	-1.1
3,552,006	+		RR41_RS17100	0.86	-1.3
3,552,006	+		RR41_RS17100	0.86	+1.7
3,552,006	+		RR41_RS17100	0.86	-0.6
3,552,007	-		RR41_RS17100	0.86	+0.2
3,552,028	-		RR41_RS17100	0.89	+0.2
3,552,087	+				-0.9
3,552,097	+				-1.9
3,552,097	+				-0.3
3,552,158	+				-0.8
3,552,175	+				-3.2