Strain Fitness in Acinetobacter baumannii LAC-4 around RR41_RS16740

Experiment: RPMI_TSB_serum temperature; 30C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RPMI_TSB_serum temperature; 30C
3,476,408	-		RR41_RS16730	0.60	-2.3
3,476,434	+		RR41_RS16730	0.61	-2.0
3,476,434	+		RR41_RS16730	0.61	-0.7
3,476,442	+		RR41_RS16730	0.62	-2.7
3,476,442	+		RR41_RS16730	0.62	-1.0
3,476,442	+		RR41_RS16730	0.62	+1.0
3,476,442	+		RR41_RS16730	0.62	+0.6
3,476,442	+		RR41_RS16730	0.62	+1.6
3,476,442	+		RR41_RS16730	0.62	+1.6
3,476,443	-		RR41_RS16730	0.62	-3.3
3,476,443	-		RR41_RS16730	0.62	+1.5
3,476,443	-		RR41_RS16730	0.62	-0.8
3,476,443	-		RR41_RS16730	0.62	+0.8
3,476,443	-		RR41_RS16730	0.62	-0.4
3,476,443	-		RR41_RS16730	0.62	+1.6
3,476,445	+		RR41_RS16730	0.62	-0.6
3,476,445	+		RR41_RS16730	0.62	+1.2
3,476,445	+		RR41_RS16730	0.62	+1.8
3,476,454	+		RR41_RS16730	0.63	-2.8
3,476,454	+		RR41_RS16730	0.63	-0.7
3,476,455	-		RR41_RS16730	0.63	-0.6
3,476,461	+		RR41_RS16730	0.63	-1.0
3,476,461	+		RR41_RS16730	0.63	-0.0
3,476,462	-		RR41_RS16730	0.63	-3.1
3,476,469	+		RR41_RS16730	0.64	-1.6
3,476,470	-		RR41_RS16730	0.64	-0.0
3,476,511	+		RR41_RS16730	0.67	-1.1
3,476,511	+		RR41_RS16730	0.67	+1.1
3,476,511	+		RR41_RS16730	0.67	-1.0
3,476,511	+		RR41_RS16730	0.67	-2.8
3,476,512	-		RR41_RS16730	0.67	-1.6
3,476,512	-		RR41_RS16730	0.67	-0.0
3,476,512	-		RR41_RS16730	0.67	+0.6
3,476,523	+		RR41_RS16730	0.68	+3.0
3,476,543	+		RR41_RS16730	0.69	+1.6
3,476,585	+		RR41_RS16730	0.72	-3.6
3,476,586	-		RR41_RS16730	0.72	-0.0
3,476,586	-		RR41_RS16730	0.72	+0.7
3,476,601	+		RR41_RS16730	0.73	-0.7
3,476,601	+		RR41_RS16730	0.73	-1.6
3,476,605	-		RR41_RS16730	0.73	-2.3
3,476,633	+		RR41_RS16730	0.75	+2.2
3,476,633	+		RR41_RS16730	0.75	-0.9
3,476,634	-		RR41_RS16730	0.75	-2.0
3,476,634	-		RR41_RS16730	0.75	+0.3
3,476,643	-		RR41_RS16730	0.76	-0.3
3,476,647	+		RR41_RS16730	0.76	+1.8
3,476,657	+		RR41_RS16730	0.77	-1.0
3,476,657	+		RR41_RS16730	0.77	+2.8
3,476,679	+		RR41_RS16730	0.78	-1.0
3,476,682	+		RR41_RS16730	0.79	+0.5
3,476,707	+		RR41_RS16730	0.80	+1.0
3,476,707	+		RR41_RS16730	0.80	+1.0
3,476,708	-		RR41_RS16730	0.80	-0.5
3,476,711	-		RR41_RS16730	0.81	+0.7
3,476,711	-		RR41_RS16730	0.81	-0.0
3,476,720	-		RR41_RS16730	0.81	-0.6
3,476,740	+		RR41_RS16730	0.83	-0.8
3,476,740	+		RR41_RS16730	0.83	-0.0
3,476,740	+		RR41_RS16730	0.83	+1.3
3,476,740	+		RR41_RS16730	0.83	+2.8
3,476,742	+		RR41_RS16730	0.83	+2.8
3,476,742	+		RR41_RS16730	0.83	+0.4
3,476,743	-		RR41_RS16730	0.83	-1.6
3,476,754	+		RR41_RS16730	0.84	-2.3
3,476,754	+		RR41_RS16730	0.84	+0.3
3,476,755	-		RR41_RS16730	0.84	+0.3
3,476,778	+		RR41_RS16730	0.85	-1.6
3,476,778	+		RR41_RS16730	0.85	+1.1
3,476,779	-		RR41_RS16730	0.85	+3.2
3,476,779	-		RR41_RS16730	0.85	+0.3
3,476,798	+		RR41_RS16730	0.87	-2.0
3,476,799	-		RR41_RS16730	0.87	-0.3
3,476,847	+				+0.7
3,476,848	-				-0.0
3,476,851	+				-0.2
3,476,851	+				+0.7
3,476,852	-				-1.0
3,476,917	+				-1.9
3,476,917	+				+0.3
3,476,920	-				-1.5
3,476,929	+				-0.0
3,476,931	+				-1.0
3,476,931	+				+1.3
3,476,949	+				+1.6
3,477,012	+				-0.0
3,477,012	+				+0.3
3,477,013	-				+1.7
3,477,013	-				+0.7
3,477,015	-				-1.0
3,477,015	-				-3.0
3,477,015	-				-0.8
3,477,015	-				-1.0
3,477,015	-				+0.6
3,477,017	+				-0.4
3,477,017	+				-2.2
3,477,017	+				+0.3
3,477,017	+				+0.7
3,477,018	-				+1.0
3,477,018	-				-0.2
3,477,018	-				+0.1
3,477,018	-				-1.9
3,477,018	-				-0.3
3,477,018	-				+2.2
3,477,018	-				-2.8
3,477,018	-				+2.8
3,477,451	-		RR41_RS16740	0.28	-1.0
3,477,457	-		RR41_RS16740	0.31	-0.0
3,477,457	-		RR41_RS16740	0.31	-0.0
3,477,457	-		RR41_RS16740	0.31	-2.3
3,477,480	-		RR41_RS16740	0.46	-2.6
3,477,480	-		RR41_RS16740	0.46	-2.6
3,477,480	-		RR41_RS16740	0.46	-1.9
3,477,480	-		RR41_RS16740	0.46	-1.0
3,477,480	-		RR41_RS16740	0.46	-2.3
3,477,480	-		RR41_RS16740	0.46	-1.0
3,477,483	-		RR41_RS16740	0.48	-0.8
3,477,623	+				+1.0
3,477,624	-				+1.6
3,477,671	+				-1.3
3,477,671	+				+1.0
3,477,672	-				-2.0
3,477,672	-				+1.3
3,477,688	+				-3.0
3,477,689	-				-0.0
3,477,711	-				-2.0
3,477,725	+				-1.6
3,477,726	-				+1.3
3,477,726	-				-0.0
3,477,732	-				+1.3
3,477,740	+				-0.0
3,477,741	-				-1.0
3,477,741	-				-0.6
3,477,741	-				+1.7
3,477,779	-				-0.5
3,477,780	+				+0.6
3,477,780	+				-1.2
3,477,810	+				+1.6
3,477,838	-				-1.0
3,477,840	+				-1.2
3,477,847	-				-1.6
3,477,850	-				+0.2
3,477,871	-				-0.1
3,477,905	+		RR41_RS16745	0.11	-2.0
3,477,905	+		RR41_RS16745	0.11	-0.4
3,477,906	-		RR41_RS16745	0.11	-1.6
3,477,957	-		RR41_RS16745	0.14	+1.0
3,478,014	-		RR41_RS16745	0.18	+0.7
3,478,104	-		RR41_RS16745	0.23	-2.3
3,478,104	-		RR41_RS16745	0.23	+3.0
3,478,110	-		RR41_RS16745	0.23	-1.8
3,478,136	+		RR41_RS16745	0.25	-2.0
3,478,175	+		RR41_RS16745	0.27	+0.6
3,478,175	+		RR41_RS16745	0.27	-2.8
3,478,175	+		RR41_RS16745	0.27	+0.5
3,478,197	-		RR41_RS16745	0.28	-2.6
3,478,208	+		RR41_RS16745	0.29	-1.0
3,478,208	+		RR41_RS16745	0.29	-3.8
3,478,222	-		RR41_RS16745	0.30	+0.2
3,478,266	+		RR41_RS16745	0.32	-1.6
3,478,267	-		RR41_RS16745	0.32	-2.6
3,478,296	-		RR41_RS16745	0.34	-1.0
3,478,296	-		RR41_RS16745	0.34	-2.9
3,478,298	+		RR41_RS16745	0.34	-1.0
3,478,354	-		RR41_RS16745	0.38	-0.5
3,478,356	+		RR41_RS16745	0.38	-1.6
3,478,356	+		RR41_RS16745	0.38	-0.7
3,478,398	+		RR41_RS16745	0.40	-2.6
3,478,398	+		RR41_RS16745	0.40	-0.0
3,478,398	+		RR41_RS16745	0.40	-2.6
3,478,398	+		RR41_RS16745	0.40	-2.3
3,478,398	+		RR41_RS16745	0.40	-0.0
3,478,409	+		RR41_RS16745	0.41	-1.6
3,478,410	-		RR41_RS16745	0.41	+2.3
3,478,444	+		RR41_RS16745	0.43	-0.0
3,478,444	+		RR41_RS16745	0.43	-0.0
3,478,547	+		RR41_RS16745	0.49	-3.0
3,478,548	-		RR41_RS16745	0.49	+1.0
3,478,548	-		RR41_RS16745	0.49	-1.3