Strain Fitness in Acinetobacter baumannii LAC-4 around RR41_RS16560

Experiment: RPMI_TSB_serum temperature; 30C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RPMI_TSB_serum temperature; 30C
3,441,729	+		RR41_RS16550	0.80	-0.3
3,441,729	+		RR41_RS16550	0.80	+1.0
3,441,757	-		RR41_RS16550	0.85	+0.0
3,441,780	+		RR41_RS16550	0.89	-0.6
3,441,780	+		RR41_RS16550	0.89	-2.6
3,441,825	+				-2.1
3,441,874	+				-1.3
3,441,875	-				-1.2
3,441,891	+				-2.0
3,441,910	+				+0.0
3,441,910	+				-2.3
3,441,910	+				-2.0
3,441,910	+				-0.2
3,441,910	+				-0.6
3,441,910	+				-0.8
3,441,910	+				+1.0
3,441,911	-				-1.0
3,441,911	-				+1.0
3,441,911	-				+0.0
3,441,911	-				+0.6
3,441,911	-				-2.3
3,441,911	-				-1.0
3,441,927	+				-1.6
3,441,928	-				+0.3
3,441,929	+				-0.6
3,441,929	+				-1.2
3,441,930	-				+0.0
3,441,933	+				-0.6
3,441,934	-				+0.6
3,441,943	+		RR41_RS16555	0.11	-1.0
3,441,957	+		RR41_RS16555	0.13	-1.0
3,441,964	+		RR41_RS16555	0.14	+0.0
3,441,999	-		RR41_RS16555	0.19	-1.2
3,442,003	-		RR41_RS16555	0.19	+0.2
3,442,003	-		RR41_RS16555	0.19	-2.0
3,442,011	+		RR41_RS16555	0.20	-2.3
3,442,035	+		RR41_RS16555	0.24	-0.2
3,442,044	+		RR41_RS16555	0.25	+0.0
3,442,045	-		RR41_RS16555	0.25	-0.1
3,442,045	-		RR41_RS16555	0.25	+0.0
3,442,062	+		RR41_RS16555	0.27	-2.3
3,442,062	+		RR41_RS16555	0.27	-1.0
3,442,062	+		RR41_RS16555	0.27	+0.0
3,442,063	-		RR41_RS16555	0.28	-0.4
3,442,063	-		RR41_RS16555	0.28	+0.9
3,442,063	-		RR41_RS16555	0.28	+0.5
3,442,063	-		RR41_RS16555	0.28	-1.6
3,442,121	+		RR41_RS16555	0.36	-2.3
3,442,122	-		RR41_RS16555	0.36	-2.8
3,442,122	-		RR41_RS16555	0.36	-2.6
3,442,143	+		RR41_RS16555	0.39	+1.0
3,442,144	-		RR41_RS16555	0.39	-2.3
3,442,153	-		RR41_RS16555	0.40	+0.0
3,442,153	-		RR41_RS16555	0.40	-1.2
3,442,154	+		RR41_RS16555	0.40	-1.6
3,442,155	-		RR41_RS16555	0.40	+1.6
3,442,155	-		RR41_RS16555	0.40	-1.0
3,442,158	+		RR41_RS16555	0.41	+2.8
3,442,159	-		RR41_RS16555	0.41	+2.3
3,442,239	-		RR41_RS16555	0.52	-0.2
3,442,239	-		RR41_RS16555	0.52	+0.8
3,442,239	-		RR41_RS16555	0.52	-0.3
3,442,277	-		RR41_RS16555	0.57	+0.6
3,442,338	-		RR41_RS16555	0.66	-0.6
3,442,402	+		RR41_RS16555	0.75	+1.6
3,442,402	+		RR41_RS16555	0.75	-1.0
3,442,429	+		RR41_RS16555	0.79	-0.3
3,442,480	+		RR41_RS16555	0.86	-3.6
3,442,513	+				+1.0
3,442,514	-				-2.0
3,442,543	+				+0.0
3,442,544	-				+1.6
3,442,544	-				-0.3
3,442,544	-				+0.0
3,442,558	+				+0.2
3,442,558	+				+1.0
3,442,559	-				+0.3
3,442,571	-				+0.0
3,442,571	-				+0.0
3,442,615	+				-1.3
3,442,628	+				-2.0
3,442,628	+				-2.6
3,442,634	+				-0.4
3,442,634	+				+1.2
3,442,635	-				-1.0
3,442,662	+				+1.4
3,442,662	+				-1.0
3,442,662	+				-0.3
3,442,663	-				+0.4
3,442,715	+				+0.0
3,442,716	-				-0.7
3,442,731	-				-1.0
3,442,756	+				-1.2
3,442,756	+				-2.0
3,442,798	-				-2.0
3,442,895	+		RR41_RS16560	0.13	-1.0
3,443,239	-		RR41_RS16560	0.39	-1.6
3,443,426	-		RR41_RS16560	0.53	-2.8
3,443,505	+		RR41_RS16560	0.59	-1.0
3,443,535	-		RR41_RS16560	0.61	-1.6
3,443,666	-		RR41_RS16560	0.71	-1.0
3,443,777	+		RR41_RS16560	0.80	+0.0
3,443,822	-		RR41_RS16560	0.83	+0.0
3,443,932	+				+0.0
3,443,933	-				-1.6
3,444,042	+				-2.3
3,444,066	-				-2.8
3,444,090	+				+0.0
3,444,091	-				-2.3
3,444,098	+				-3.0
3,444,100	+				-1.0
3,444,155	+				-2.0
3,444,155	+				-0.2
3,444,156	-				-0.8
3,444,156	-				+0.0
3,444,160	-				+2.0
3,444,206	+		RR41_RS16565	0.10	+2.0
3,444,212	+		RR41_RS16565	0.11	-2.3
3,444,245	-		RR41_RS16565	0.17	+1.0
3,444,290	+		RR41_RS16565	0.24	+0.0
3,444,351	+		RR41_RS16565	0.34	-2.8
3,444,352	-		RR41_RS16565	0.34	+0.0
3,444,418	-		RR41_RS16565	0.45	-1.0
3,444,435	-		RR41_RS16565	0.48	-1.0
3,444,435	-		RR41_RS16565	0.48	-2.8
3,444,457	+		RR41_RS16565	0.52	-3.1
3,444,457	+		RR41_RS16565	0.52	+0.0
3,444,457	+		RR41_RS16565	0.52	+2.0
3,444,457	+		RR41_RS16565	0.52	-0.7
3,444,457	+		RR41_RS16565	0.52	-2.3
3,444,465	+		RR41_RS16565	0.53	-1.0
3,444,506	+		RR41_RS16565	0.60	-1.4
3,444,537	-		RR41_RS16565	0.65	-1.6
3,444,539	+		RR41_RS16565	0.65	-0.7
3,444,540	-		RR41_RS16565	0.65	+1.6
3,444,540	-		RR41_RS16565	0.65	-2.0
3,444,540	-		RR41_RS16565	0.65	+0.6
3,444,541	+		RR41_RS16565	0.66	-2.0
3,444,601	-		RR41_RS16565	0.75	-2.0
3,444,601	-		RR41_RS16565	0.75	-2.6
3,444,668	-		RR41_RS16565	0.86	+0.0
3,444,671	+		RR41_RS16565	0.87	-0.6
3,444,721	-				-2.1
3,444,745	+				-0.7
3,444,745	+				+0.0
3,444,745	+				-2.8
3,444,746	-				-1.0
3,444,746	-				-2.0
3,444,746	-				+0.0
3,444,746	-				-2.6
3,444,749	+				-1.0
3,444,749	+				-2.6
3,444,749	+				-1.6
3,444,749	+				-1.0
3,444,749	+				+0.0
3,444,749	+				+0.8
3,444,749	+				+0.0
3,444,749	+				-1.0
3,444,750	-				-1.0
3,444,750	-				+1.0
3,444,750	-				-1.6
3,444,750	-				-2.3
3,444,750	-				-0.7
3,444,758	+				+2.0
3,444,781	-				+0.4
3,444,781	-				-2.6
3,444,785	+				-2.8
3,444,786	-				+0.0
3,444,806	-				-1.6
3,444,806	-				+0.0
3,444,839	+				-2.0
3,444,839	+				-2.6
3,444,839	+				-1.7
3,444,840	-				-1.6
3,444,840	-				-2.6
3,444,840	-				-2.0
3,444,843	-				+0.0
3,444,843	-				-2.0
3,444,843	-				+0.6
3,444,843	-				-1.4
3,444,845	-				-0.8
3,444,847	+				-2.0
3,444,847	+				+0.9
3,444,852	-				-0.8
3,444,857	+				-0.4
3,444,857	+				+0.0
3,444,857	+				+0.0
3,444,857	+				-1.0
3,444,857	+				+2.0
3,444,857	+				-0.4
3,444,858	-				-2.0
3,444,858	-				-1.0
3,444,861	+				-1.0
3,444,861	+				-2.3
3,444,861	+				+0.9
3,444,862	-				-1.0
3,444,862	-				-2.1
3,444,865	+				+1.5
3,444,866	-				-0.6
3,444,872	+				-1.0
3,444,873	-				-1.6
3,444,873	-				-1.0
3,444,881	+				+0.6
3,444,882	-				+0.6
3,444,889	+				+1.3
3,444,889	+				+0.7
3,444,889	+				-1.6
3,444,890	-				-0.4
3,444,985	+				-1.0
3,444,985	+				-1.2
3,444,986	-				-2.3
3,445,021	-				-0.2
3,445,021	-				-2.0
3,445,021	-				+1.0