Strain Fitness in Acinetobacter baumannii LAC-4 around RR41_RS15735

Experiment: RPMI_TSB_serum temperature; 30C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RPMI_TSB_serum temperature; 30C
3,267,956	+		RR41_RS15730	0.52	+0.4
3,267,969	+		RR41_RS15730	0.52	+0.1
3,267,989	+		RR41_RS15730	0.53	+0.7
3,267,989	+		RR41_RS15730	0.53	+0.7
3,268,057	+		RR41_RS15730	0.57	-2.4
3,268,057	+		RR41_RS15730	0.57	-0.9
3,268,058	-		RR41_RS15730	0.57	-2.1
3,268,058	-		RR41_RS15730	0.57	+1.1
3,268,119	+		RR41_RS15730	0.60	-1.8
3,268,119	+		RR41_RS15730	0.60	+0.1
3,268,119	+		RR41_RS15730	0.60	+1.1
3,268,137	+		RR41_RS15730	0.61	-2.9
3,268,149	+		RR41_RS15730	0.61	+0.4
3,268,150	-		RR41_RS15730	0.62	+0.3
3,268,192	+		RR41_RS15730	0.64	+0.7
3,268,193	-		RR41_RS15730	0.64	+0.7
3,268,193	-		RR41_RS15730	0.64	-2.2
3,268,193	-		RR41_RS15730	0.64	-2.7
3,268,193	-		RR41_RS15730	0.64	-1.5
3,268,200	+		RR41_RS15730	0.64	-1.5
3,268,200	+		RR41_RS15730	0.64	+0.1
3,268,200	+		RR41_RS15730	0.64	-0.9
3,268,201	-		RR41_RS15730	0.64	-0.9
3,268,221	+		RR41_RS15730	0.65	-2.7
3,268,337	+		RR41_RS15730	0.71	-0.9
3,268,340	+		RR41_RS15730	0.71	-2.2
3,268,341	-		RR41_RS15730	0.71	-1.9
3,268,368	+		RR41_RS15730	0.73	+0.7
3,268,411	+		RR41_RS15730	0.75	-2.9
3,268,411	+		RR41_RS15730	0.75	+0.7
3,268,411	+		RR41_RS15730	0.75	+1.1
3,268,412	-		RR41_RS15730	0.75	-1.8
3,268,412	-		RR41_RS15730	0.75	-1.2
3,268,415	+		RR41_RS15730	0.75	-2.7
3,268,416	-		RR41_RS15730	0.75	-0.2
3,268,416	-		RR41_RS15730	0.75	-2.5
3,268,451	-		RR41_RS15730	0.77	+0.4
3,268,486	+		RR41_RS15730	0.79	+0.1
3,268,486	+		RR41_RS15730	0.79	-2.5
3,268,487	-		RR41_RS15730	0.79	-1.3
3,268,487	-		RR41_RS15730	0.79	+0.7
3,268,509	+		RR41_RS15730	0.80	-1.9
3,268,509	+		RR41_RS15730	0.80	-2.5
3,268,509	+		RR41_RS15730	0.80	-0.2
3,268,529	+		RR41_RS15730	0.81	+1.5
3,268,529	+		RR41_RS15730	0.81	-0.9
3,268,529	+		RR41_RS15730	0.81	+1.0
3,268,529	+		RR41_RS15730	0.81	+0.7
3,268,529	+		RR41_RS15730	0.81	-1.1
3,268,529	+		RR41_RS15730	0.81	-0.3
3,268,530	-		RR41_RS15730	0.81	-0.9
3,268,530	-		RR41_RS15730	0.81	-0.6
3,268,530	-		RR41_RS15730	0.81	-1.5
3,268,530	-		RR41_RS15730	0.81	+0.1
3,268,597	-		RR41_RS15730	0.85	-0.9
3,268,599	+		RR41_RS15730	0.85	+0.1
3,268,660	-		RR41_RS15730	0.88	+0.4
3,268,748	-				-1.5
3,268,752	+				-3.2
3,268,800	+				+0.1
3,268,801	-				+2.1
3,268,803	+				-1.2
3,268,811	+				-0.9
3,268,875	+				-1.9
3,268,921	-				+0.1
3,268,921	-				+1.1
3,268,924	+				+0.3
3,268,925	-				-0.5
3,268,992	+		RR41_RS15735	0.15	-0.2
3,268,996	+		RR41_RS15735	0.16	+0.4
3,269,002	+		RR41_RS15735	0.17	+0.1
3,269,002	+		RR41_RS15735	0.17	-1.5
3,269,023	+		RR41_RS15735	0.22	-1.5
3,269,023	+		RR41_RS15735	0.22	-2.9
3,269,023	+		RR41_RS15735	0.22	-1.2
3,269,024	-		RR41_RS15735	0.23	-2.7
3,269,069	+		RR41_RS15735	0.34	-1.3
3,269,138	-		RR41_RS15735	0.52	+1.1
3,269,179	+		RR41_RS15735	0.62	-2.5
3,269,179	+		RR41_RS15735	0.62	+1.1
3,269,204	-		RR41_RS15735	0.68	-1.5
3,269,204	-		RR41_RS15735	0.68	-0.5
3,269,215	+		RR41_RS15735	0.71	-1.8
3,269,216	-		RR41_RS15735	0.71	-1.5
3,269,218	+		RR41_RS15735	0.72	-0.3
3,269,236	+		RR41_RS15735	0.76	-1.9
3,269,237	-		RR41_RS15735	0.77	+1.1
3,269,237	-		RR41_RS15735	0.77	-1.3
3,269,237	-		RR41_RS15735	0.77	-1.5
3,269,251	+		RR41_RS15735	0.80	-1.9
3,269,252	-		RR41_RS15735	0.80	+0.9
3,269,276	+		RR41_RS15735	0.86	-0.9
3,269,276	+		RR41_RS15735	0.86	+0.1
3,269,304	+				-2.2
3,269,304	+				+0.1
3,269,305	-				+1.7
3,269,305	-				+0.9
3,269,312	+				+0.1
3,269,335	-				+1.1
3,269,351	+				-1.5
3,269,366	+				-0.9
3,269,366	+				-3.5
3,269,367	-				+0.1
3,269,367	-				-0.5
3,269,369	+				+0.4
3,269,390	+				+3.1
3,269,391	-				-1.9
3,269,409	+				-1.5
3,269,410	-				-1.9
3,269,423	+				+1.7
3,269,496	+				-1.9
3,269,496	+				+0.7
3,269,561	+		RR41_RS15740	0.16	+0.2
3,269,567	-		RR41_RS15740	0.17	-2.9
3,269,567	-		RR41_RS15740	0.17	-0.9
3,269,567	-		RR41_RS15740	0.17	+0.1
3,269,574	+		RR41_RS15740	0.17	+1.7
3,269,575	-		RR41_RS15740	0.18	+0.2
3,269,593	-		RR41_RS15740	0.20	-0.9
3,269,593	-		RR41_RS15740	0.20	-0.3
3,269,647	+		RR41_RS15740	0.26	+3.3
3,269,648	-		RR41_RS15740	0.26	-1.9
3,269,651	-		RR41_RS15740	0.27	+0.1
3,269,651	-		RR41_RS15740	0.27	-0.9
3,269,651	-		RR41_RS15740	0.27	-2.5
3,269,703	+		RR41_RS15740	0.33	+0.1
3,269,704	-		RR41_RS15740	0.33	+0.7
3,269,776	-		RR41_RS15740	0.42	+1.1
3,269,827	+		RR41_RS15740	0.48	+0.1
3,269,827	+		RR41_RS15740	0.48	+0.6
3,269,834	+		RR41_RS15740	0.49	+2.4
3,269,834	+		RR41_RS15740	0.49	+1.8
3,269,835	-		RR41_RS15740	0.49	+0.7
3,269,845	+		RR41_RS15740	0.50	-0.3
3,269,846	-		RR41_RS15740	0.50	-0.5
3,269,846	-		RR41_RS15740	0.50	+2.7
3,269,846	-		RR41_RS15740	0.50	+0.7
3,269,867	+		RR41_RS15740	0.53	+2.7
3,269,880	+		RR41_RS15740	0.55	+0.4
3,269,881	-		RR41_RS15740	0.55	+0.1
3,269,885	+		RR41_RS15740	0.55	+0.1
3,269,886	-		RR41_RS15740	0.55	-0.5
3,269,886	-		RR41_RS15740	0.55	-0.8
3,269,902	-		RR41_RS15740	0.57	-0.9
3,269,907	+		RR41_RS15740	0.58	-1.2
3,269,908	-		RR41_RS15740	0.58	-2.2
3,269,908	-		RR41_RS15740	0.58	-0.2
3,269,915	+		RR41_RS15740	0.59	+0.7
3,269,915	+		RR41_RS15740	0.59	-1.5
3,269,916	-		RR41_RS15740	0.59	+0.1
3,269,916	-		RR41_RS15740	0.59	-1.9
3,269,952	+		RR41_RS15740	0.63	-0.3
3,269,954	+		RR41_RS15740	0.64	+2.1
3,269,954	+		RR41_RS15740	0.64	-2.9
3,269,954	+		RR41_RS15740	0.64	-1.1
3,269,954	+		RR41_RS15740	0.64	+0.5
3,269,955	-		RR41_RS15740	0.64	-2.7
3,269,955	-		RR41_RS15740	0.64	+0.1
3,270,001	+		RR41_RS15740	0.69	-0.9
3,270,016	+		RR41_RS15740	0.71	+1.2
3,270,061	-		RR41_RS15740	0.77	-1.2
3,270,078	+		RR41_RS15740	0.79	+0.1
3,270,144	+		RR41_RS15740	0.87	+0.8
3,270,145	-		RR41_RS15740	0.87	-1.5
3,270,154	+		RR41_RS15740	0.88	-2.5
3,270,154	+		RR41_RS15740	0.88	+0.7
3,270,155	-		RR41_RS15740	0.88	+0.8
3,270,201	+				+0.1
3,270,207	+				-1.4
3,270,229	+				-1.1
3,270,261	+				+0.7
3,270,261	+				+0.2
3,270,270	+				-0.9
3,270,274	-				+0.1
3,270,284	+				-1.1
3,270,284	+				-1.8