Strain Fitness in Acinetobacter baumannii LAC-4 around RR41_RS05520

Experiment: RPMI_TSB_serum temperature; 30C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RPMI_TSB_serum temperature; 30C
1,153,054	-		RR41_RS05515	0.39	-1.3
1,153,055	+		RR41_RS05515	0.39	+1.3
1,153,085	+		RR41_RS05515	0.41	-0.7
1,153,085	+		RR41_RS05515	0.41	-1.7
1,153,087	+		RR41_RS05515	0.41	+1.0
1,153,088	-		RR41_RS05515	0.41	+1.8
1,153,117	+		RR41_RS05515	0.43	-1.3
1,153,117	+		RR41_RS05515	0.43	-1.1
1,153,117	+		RR41_RS05515	0.43	-1.7
1,153,135	+		RR41_RS05515	0.44	-1.7
1,153,170	+		RR41_RS05515	0.46	-2.1
1,153,171	-		RR41_RS05515	0.46	-0.7
1,153,171	-		RR41_RS05515	0.46	+0.3
1,153,173	+		RR41_RS05515	0.47	-1.7
1,153,174	-		RR41_RS05515	0.47	+0.7
1,153,174	-		RR41_RS05515	0.47	+1.6
1,153,214	+		RR41_RS05515	0.49	-1.7
1,153,281	+		RR41_RS05515	0.53	-0.7
1,153,282	-		RR41_RS05515	0.53	+0.3
1,153,305	-		RR41_RS05515	0.55	-0.7
1,153,330	+		RR41_RS05515	0.56	+0.3
1,153,380	+		RR41_RS05515	0.59	-2.1
1,153,381	-		RR41_RS05515	0.60	-1.3
1,153,402	-		RR41_RS05515	0.61	-0.7
1,153,498	+		RR41_RS05515	0.67	-1.6
1,153,499	-		RR41_RS05515	0.67	-1.5
1,153,530	+		RR41_RS05515	0.69	-1.9
1,153,594	+		RR41_RS05515	0.73	+0.3
1,153,606	-		RR41_RS05515	0.73	-1.7
1,153,640	-		RR41_RS05515	0.76	-1.3
1,153,659	+		RR41_RS05515	0.77	-1.3
1,153,659	+		RR41_RS05515	0.77	+0.3
1,153,659	+		RR41_RS05515	0.77	+0.3
1,153,662	+		RR41_RS05515	0.77	-2.7
1,153,756	-		RR41_RS05515	0.83	+2.3
1,153,761	+		RR41_RS05515	0.83	+0.5
1,153,779	+		RR41_RS05515	0.84	-1.3
1,153,779	+		RR41_RS05515	0.84	-0.7
1,153,780	-		RR41_RS05515	0.84	+0.3
1,153,841	-		RR41_RS05515	0.88	+0.3
1,153,841	-		RR41_RS05515	0.88	-2.7
1,153,849	-		RR41_RS05515	0.89	-0.7
1,154,029	-				-0.7
1,154,052	+				+0.3
1,154,153	-				+0.3
1,154,154	+				-2.1
1,154,159	+				-0.5
1,154,159	+				-0.7
1,154,225	+		RR41_RS05520	0.12	+0.3
1,154,228	+		RR41_RS05520	0.12	-1.3
1,154,288	+		RR41_RS05520	0.16	+0.3
1,154,289	-		RR41_RS05520	0.16	-1.7
1,154,289	-		RR41_RS05520	0.16	-0.7
1,154,301	-		RR41_RS05520	0.17	-0.7
1,154,340	+		RR41_RS05520	0.19	-1.7
1,154,341	-		RR41_RS05520	0.20	-1.2
1,154,362	-		RR41_RS05520	0.21	-0.7
1,154,394	+		RR41_RS05520	0.23	+0.3
1,154,429	+		RR41_RS05520	0.25	+0.3
1,154,462	+		RR41_RS05520	0.27	+0.3
1,154,492	+		RR41_RS05520	0.29	-1.2
1,154,519	+		RR41_RS05520	0.31	+0.3
1,154,529	-		RR41_RS05520	0.31	-1.1
1,154,565	+		RR41_RS05520	0.34	-2.5
1,154,566	-		RR41_RS05520	0.34	-1.7
1,154,640	-		RR41_RS05520	0.38	-1.3
1,154,714	+		RR41_RS05520	0.43	-1.9
1,154,797	+		RR41_RS05520	0.48	+0.3
1,154,905	-		RR41_RS05520	0.55	-1.7
1,155,003	+		RR41_RS05520	0.61	-0.7
1,155,004	-		RR41_RS05520	0.61	+0.3
1,155,004	-		RR41_RS05520	0.61	-1.0
1,155,011	+		RR41_RS05520	0.62	+0.3
1,155,021	+		RR41_RS05520	0.62	-2.7
1,155,022	-		RR41_RS05520	0.62	-0.3
1,155,025	+		RR41_RS05520	0.62	-1.0
1,155,045	+		RR41_RS05520	0.64	+0.3
1,155,045	+		RR41_RS05520	0.64	-1.9
1,155,048	-		RR41_RS05520	0.64	+2.3
1,155,048	-		RR41_RS05520	0.64	+1.3
1,155,105	+		RR41_RS05520	0.67	-0.7
1,155,105	+		RR41_RS05520	0.67	-1.1
1,155,105	+		RR41_RS05520	0.67	-1.7
1,155,106	-		RR41_RS05520	0.67	-2.1
1,155,116	+		RR41_RS05520	0.68	-1.7
1,155,117	-		RR41_RS05520	0.68	+0.5
1,155,117	-		RR41_RS05520	0.68	+1.3
1,155,129	+		RR41_RS05520	0.69	-0.7
1,155,129	+		RR41_RS05520	0.69	+0.3
1,155,177	-		RR41_RS05520	0.72	+0.3
1,155,223	+		RR41_RS05520	0.75	-2.3
1,155,224	-		RR41_RS05520	0.75	-0.7
1,155,224	-		RR41_RS05520	0.75	-2.5
1,155,241	-		RR41_RS05520	0.76	-1.3
1,155,255	+		RR41_RS05520	0.77	-2.3
1,155,255	+		RR41_RS05520	0.77	-1.5
1,155,271	-		RR41_RS05520	0.78	-0.7
1,155,308	+		RR41_RS05520	0.80	-2.9
1,155,309	-		RR41_RS05520	0.80	-1.3
1,155,528	-				-3.2
1,155,597	+				-0.5
1,155,606	-				+0.5
1,155,679	-				+0.3
1,155,712	-				+0.3
1,155,713	+				-2.1
1,155,713	+				-2.7
1,155,713	+				-1.3
1,155,713	+				-2.0
1,155,714	-				-0.2
1,155,716	+				-0.2
1,155,716	+				+1.8
1,155,716	+				-0.7
1,155,716	+				+1.3
1,155,716	+				-1.2
1,155,717	-				+0.3
1,155,752	+				-0.7
1,155,756	+				+1.8
1,155,756	+				-1.0
1,155,789	-		RR41_RS05525	0.13	-0.1
1,155,833	-		RR41_RS05525	0.19	+0.6
1,155,862	+		RR41_RS05525	0.23	-1.7
1,155,889	+		RR41_RS05525	0.26	-2.3
1,155,897	+		RR41_RS05525	0.27	+0.8
1,155,930	-		RR41_RS05525	0.32	-1.0
1,155,934	+		RR41_RS05525	0.32	-2.3
1,155,966	+		RR41_RS05525	0.37	-0.1
1,155,967	-		RR41_RS05525	0.37	+0.3
1,155,985	+		RR41_RS05525	0.39	+1.3
1,156,013	-		RR41_RS05525	0.43	+0.8
1,156,013	-		RR41_RS05525	0.43	+1.8
1,156,035	+		RR41_RS05525	0.46	-1.7
1,156,037	+		RR41_RS05525	0.46	+0.9
1,156,047	-		RR41_RS05525	0.48	+0.6
1,156,054	-		RR41_RS05525	0.49	-0.7
1,156,067	-		RR41_RS05525	0.50	-1.3
1,156,373	-				+0.3
1,156,441	-				-2.1
1,156,464	+				+2.4
1,156,497	+				+0.5
1,156,533	+		RR41_RS05530	0.12	-1.3
1,156,533	+		RR41_RS05530	0.12	+0.1
1,156,533	+		RR41_RS05530	0.12	-0.2
1,156,534	-		RR41_RS05530	0.12	-0.7
1,156,535	+		RR41_RS05530	0.12	+1.0
1,156,535	+		RR41_RS05530	0.12	+1.1
1,156,535	+		RR41_RS05530	0.12	-0.3
1,156,535	+		RR41_RS05530	0.12	+0.3
1,156,535	+		RR41_RS05530	0.12	+2.6
1,156,535	+		RR41_RS05530	0.12	-3.3
1,156,535	+		RR41_RS05530	0.12	+1.1
1,156,535	+		RR41_RS05530	0.12	-1.3
1,156,535	+		RR41_RS05530	0.12	+1.7
1,156,535	+		RR41_RS05530	0.12	-1.1
1,156,535	+		RR41_RS05530	0.12	+2.8
1,156,536	-		RR41_RS05530	0.13	+0.3
1,156,536	-		RR41_RS05530	0.13	-0.7
1,156,536	-		RR41_RS05530	0.13	-0.2
1,156,536	-		RR41_RS05530	0.13	+0.8
1,156,539	+		RR41_RS05530	0.13	-0.5
1,156,568	+		RR41_RS05530	0.17	+1.5
1,156,584	+		RR41_RS05530	0.19	+2.8
1,156,585	-		RR41_RS05530	0.19	-0.7
1,156,588	+		RR41_RS05530	0.19	+1.6
1,156,589	-		RR41_RS05530	0.20	+0.3
1,156,605	-		RR41_RS05530	0.22	-0.7