Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03687

Experiment: HB-P24 MOI10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	HB-P24 MOI10
3,870,685	+				+0.2
3,871,058	+		OHPLBJKB_03686	0.62	+0.2
3,871,145	+		OHPLBJKB_03686	0.76	+0.0
3,871,151	+		OHPLBJKB_03686	0.77	-0.7
3,871,246	-				-0.0
3,871,246	-				+0.3
3,871,283	+				+0.3
3,871,284	-				+0.4
3,871,296	-				-2.3
3,871,296	-				-0.1
3,871,296	-				+0.1
3,871,303	+				-0.0
3,871,303	+				-0.2
3,871,303	+				-0.5
3,871,303	+				-0.9
3,871,304	-				+0.2
3,871,304	-				+0.7
3,871,304	-				-0.1
3,871,372	+				-1.1
3,871,372	+				-0.6
3,871,372	+				+0.7
3,871,373	-				-1.6
3,871,373	-				-0.3
3,871,426	+				+0.5
3,871,427	-				-0.4
3,871,427	-				+0.7
3,871,447	+				-0.6
3,871,448	-				-0.5
3,871,448	-				-1.1
3,871,448	-				-0.3
3,871,477	+				+0.6
3,871,481	+				+0.6
3,871,488	-				-0.1
3,871,491	+				+0.1
3,871,530	+				-0.2
3,871,531	-				+0.1
3,871,573	-				-0.2
3,871,586	+				+0.8
3,871,587	-				+0.7
3,871,684	-				+0.4
3,871,684	-				-0.4
3,871,764	+				+0.2
3,871,765	-				+1.0
3,871,765	-				-0.3
3,871,765	-				-0.5
3,871,765	-				+0.4
3,871,810	+				-0.2
3,871,810	+				-0.2
3,871,850	+		OHPLBJKB_03687	0.10	-0.8
3,871,851	-		OHPLBJKB_03687	0.10	+0.6
3,871,884	+		OHPLBJKB_03687	0.12	-0.6
3,871,885	-		OHPLBJKB_03687	0.13	-1.1
3,871,885	-		OHPLBJKB_03687	0.13	+0.1
3,871,885	-		OHPLBJKB_03687	0.13	+1.3
3,871,886	+		OHPLBJKB_03687	0.13	+0.1
3,871,886	+		OHPLBJKB_03687	0.13	-2.1
3,871,886	+		OHPLBJKB_03687	0.13	+0.5
3,871,886	+		OHPLBJKB_03687	0.13	+0.9
3,871,886	+		OHPLBJKB_03687	0.13	+0.3
3,871,886	+		OHPLBJKB_03687	0.13	-1.3
3,871,902	+		OHPLBJKB_03687	0.14	-0.6
3,871,902	+		OHPLBJKB_03687	0.14	-0.8
3,872,022	-		OHPLBJKB_03687	0.21	-0.5
3,872,155	+		OHPLBJKB_03687	0.29	+2.5
3,872,249	-		OHPLBJKB_03687	0.35	-0.2
3,872,267	-		OHPLBJKB_03687	0.36	-1.2
3,872,299	-		OHPLBJKB_03687	0.38	-0.7
3,872,313	-		OHPLBJKB_03687	0.39	+0.6
3,872,372	+		OHPLBJKB_03687	0.43	+0.8
3,872,405	+		OHPLBJKB_03687	0.45	-1.8
3,872,406	-		OHPLBJKB_03687	0.45	-0.3
3,872,470	+		OHPLBJKB_03687	0.49	-1.1
3,872,470	+		OHPLBJKB_03687	0.49	-0.0
3,872,471	-		OHPLBJKB_03687	0.49	-0.2
3,872,471	-		OHPLBJKB_03687	0.49	+1.5
3,872,471	-		OHPLBJKB_03687	0.49	+1.1
3,872,591	+		OHPLBJKB_03687	0.56	-0.6
3,872,591	+		OHPLBJKB_03687	0.56	+0.3
3,872,591	+		OHPLBJKB_03687	0.56	-0.2
3,872,592	-		OHPLBJKB_03687	0.56	-0.3
3,872,592	-		OHPLBJKB_03687	0.56	-0.5
3,872,592	-		OHPLBJKB_03687	0.56	-0.0
3,872,651	-		OHPLBJKB_03687	0.60	-0.5
3,872,700	+		OHPLBJKB_03687	0.63	+1.1
3,872,700	+		OHPLBJKB_03687	0.63	-0.6
3,872,701	-		OHPLBJKB_03687	0.63	-2.0
3,872,701	-		OHPLBJKB_03687	0.63	+1.4
3,872,701	-		OHPLBJKB_03687	0.63	-1.4
3,872,713	+		OHPLBJKB_03687	0.64	-1.1
3,872,713	+		OHPLBJKB_03687	0.64	+0.1
3,872,714	-		OHPLBJKB_03687	0.64	-0.3
3,872,715	+		OHPLBJKB_03687	0.64	-2.1
3,872,715	+		OHPLBJKB_03687	0.64	-0.4
3,872,715	+		OHPLBJKB_03687	0.64	-0.2
3,872,851	+		OHPLBJKB_03687	0.72	-2.2
3,872,973	+		OHPLBJKB_03687	0.80	-0.9
3,872,974	-		OHPLBJKB_03687	0.80	-0.6
3,872,977	+		OHPLBJKB_03687	0.80	-0.7
3,872,978	-		OHPLBJKB_03687	0.80	-0.9
3,872,978	-		OHPLBJKB_03687	0.80	-1.0
3,872,978	-		OHPLBJKB_03687	0.80	-0.7
3,873,058	+		OHPLBJKB_03687	0.85	+1.1
3,873,058	+		OHPLBJKB_03687	0.85	-0.5
3,873,058	+		OHPLBJKB_03687	0.85	+0.5
3,873,058	+		OHPLBJKB_03687	0.85	-0.4
3,873,059	-		OHPLBJKB_03687	0.85	-0.4
3,873,059	-		OHPLBJKB_03687	0.85	-0.9
3,873,059	-		OHPLBJKB_03687	0.85	-0.5
3,873,059	-		OHPLBJKB_03687	0.85	+0.2
3,873,061	+		OHPLBJKB_03687	0.85	-0.1
3,873,061	+		OHPLBJKB_03687	0.85	-0.5
3,873,062	-		OHPLBJKB_03687	0.85	+0.2
3,873,106	+		OHPLBJKB_03687	0.88	-0.9
3,873,106	+		OHPLBJKB_03687	0.88	-0.9
3,873,106	+		OHPLBJKB_03687	0.88	+0.1
3,873,107	-		OHPLBJKB_03687	0.88	+0.3
3,873,107	-		OHPLBJKB_03687	0.88	-0.5
3,873,134	+		OHPLBJKB_03687	0.90	-0.9
3,873,134	+		OHPLBJKB_03687	0.90	+0.2
3,873,134	+		OHPLBJKB_03687	0.90	-0.3
3,873,140	-				+0.1
3,873,140	-				-1.3
3,873,190	+				-0.3
3,873,191	-				-0.1
3,873,218	-				-0.7
3,873,218	-				-0.3
3,873,218	-				-2.3
3,873,255	+				-1.6
3,873,256	-				-0.5
3,873,271	+				+0.5
3,873,272	-				-1.0
3,873,272	-				+0.4
3,873,272	-				+0.0
3,873,370	+				+0.1
3,873,370	+				-1.2
3,873,370	+				+0.0
3,873,371	-				+0.1
3,873,568	-		OHPLBJKB_03688	0.30	+0.5
3,873,633	+		OHPLBJKB_03688	0.40	+0.8
3,873,634	-		OHPLBJKB_03688	0.40	-1.1
3,873,634	-		OHPLBJKB_03688	0.40	+0.1
3,873,757	+		OHPLBJKB_03688	0.58	+1.1
3,873,757	+		OHPLBJKB_03688	0.58	-0.2
3,873,781	+		OHPLBJKB_03688	0.62	-0.7
3,873,794	-		OHPLBJKB_03688	0.64	-0.9
3,873,916	-		OHPLBJKB_03688	0.82	+0.8
3,873,994	+				-0.1
3,873,995	-				-0.1
3,873,995	-				+0.5
3,874,041	-				+0.5
3,874,041	-				+0.5
3,874,055	+				+0.1
3,874,055	+				+0.8
3,874,056	-				-0.0
3,874,056	-				+0.2
3,874,059	+				+0.4
3,874,059	+				-0.4
3,874,059	+				-0.3
3,874,060	-				-0.9
3,874,060	-				+0.1
3,874,112	+		OHPLBJKB_03689	0.13	+1.5
3,874,113	-		OHPLBJKB_03689	0.13	-1.4
3,874,115	+		OHPLBJKB_03689	0.14	-0.1
3,874,115	+		OHPLBJKB_03689	0.14	+0.0
3,874,116	-		OHPLBJKB_03689	0.14	-0.5
3,874,116	-		OHPLBJKB_03689	0.14	+0.5
3,874,202	-		OHPLBJKB_03689	0.33	+0.3
3,874,202	-		OHPLBJKB_03689	0.33	+0.4
3,874,202	-		OHPLBJKB_03689	0.33	+0.2
3,874,297	-		OHPLBJKB_03689	0.54	-0.7