Experiment: HB-P24 MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02866 and OHPLBJKB_02867 are separated by 91 nucleotides OHPLBJKB_02867 and OHPLBJKB_02868 are separated by 40 nucleotides OHPLBJKB_02868 and OHPLBJKB_02869 are separated by 284 nucleotides OHPLBJKB_02869 and OHPLBJKB_02870 are separated by 57 nucleotides
OHPLBJKB_02866: OHPLBJKB_02866 - 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YbjI, at 2,987,672 to 2,988,487
_02866
OHPLBJKB_02867: OHPLBJKB_02867 - hypothetical protein, at 2,988,579 to 2,988,857
_02867
OHPLBJKB_02868: OHPLBJKB_02868 - Multidrug transporter MdfA, at 2,988,898 to 2,990,130
_02868
OHPLBJKB_02869: OHPLBJKB_02869 - Putative undecaprenyl-diphosphatase YbjG, at 2,990,415 to 2,991,011
_02869
OHPLBJKB_02870: OHPLBJKB_02870 - Deoxyribose operon repressor, at 2,991,069 to 2,991,827
_02870
Position (kb)
2988
2989
2990
2991 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2987.939 kb on - strand, within OHPLBJKB_02866 at 2987.939 kb on - strand, within OHPLBJKB_02866 at 2987.941 kb on + strand, within OHPLBJKB_02866 at 2987.941 kb on + strand, within OHPLBJKB_02866 at 2987.942 kb on - strand, within OHPLBJKB_02866 at 2988.056 kb on + strand, within OHPLBJKB_02866 at 2988.059 kb on + strand, within OHPLBJKB_02866 at 2988.083 kb on - strand, within OHPLBJKB_02866 at 2988.096 kb on + strand, within OHPLBJKB_02866 at 2988.096 kb on + strand, within OHPLBJKB_02866 at 2988.104 kb on - strand, within OHPLBJKB_02866 at 2988.153 kb on + strand, within OHPLBJKB_02866 at 2988.165 kb on + strand, within OHPLBJKB_02866 at 2988.166 kb on - strand, within OHPLBJKB_02866 at 2988.187 kb on + strand, within OHPLBJKB_02866 at 2988.187 kb on + strand, within OHPLBJKB_02866 at 2988.187 kb on + strand, within OHPLBJKB_02866 at 2988.240 kb on + strand, within OHPLBJKB_02866 at 2988.240 kb on + strand, within OHPLBJKB_02866 at 2988.240 kb on + strand, within OHPLBJKB_02866 at 2988.241 kb on - strand, within OHPLBJKB_02866 at 2988.244 kb on + strand, within OHPLBJKB_02866 at 2988.244 kb on + strand, within OHPLBJKB_02866 at 2988.245 kb on - strand, within OHPLBJKB_02866 at 2988.461 kb on - strand at 2988.534 kb on - strand at 2988.560 kb on + strand at 2988.620 kb on + strand, within OHPLBJKB_02867 at 2988.683 kb on - strand, within OHPLBJKB_02867 at 2988.683 kb on - strand, within OHPLBJKB_02867 at 2988.744 kb on + strand, within OHPLBJKB_02867 at 2988.745 kb on - strand, within OHPLBJKB_02867 at 2988.787 kb on - strand, within OHPLBJKB_02867 at 2988.809 kb on - strand, within OHPLBJKB_02867 at 2988.809 kb on - strand, within OHPLBJKB_02867 at 2988.856 kb on - strand at 2988.856 kb on - strand at 2988.935 kb on - strand at 2988.943 kb on - strand at 2988.991 kb on - strand at 2989.163 kb on + strand, within OHPLBJKB_02868 at 2989.167 kb on + strand, within OHPLBJKB_02868 at 2989.167 kb on + strand, within OHPLBJKB_02868 at 2989.168 kb on - strand, within OHPLBJKB_02868 at 2989.168 kb on - strand, within OHPLBJKB_02868 at 2989.168 kb on - strand, within OHPLBJKB_02868 at 2989.168 kb on - strand, within OHPLBJKB_02868 at 2989.168 kb on - strand, within OHPLBJKB_02868 at 2989.168 kb on - strand, within OHPLBJKB_02868 at 2989.168 kb on - strand, within OHPLBJKB_02868 at 2989.171 kb on + strand, within OHPLBJKB_02868 at 2989.189 kb on + strand, within OHPLBJKB_02868 at 2989.190 kb on - strand, within OHPLBJKB_02868 at 2989.190 kb on - strand, within OHPLBJKB_02868 at 2989.190 kb on - strand, within OHPLBJKB_02868 at 2989.193 kb on + strand, within OHPLBJKB_02868 at 2989.194 kb on - strand, within OHPLBJKB_02868 at 2989.210 kb on - strand, within OHPLBJKB_02868 at 2989.245 kb on + strand, within OHPLBJKB_02868 at 2989.263 kb on + strand, within OHPLBJKB_02868 at 2989.263 kb on + strand, within OHPLBJKB_02868 at 2989.264 kb on - strand, within OHPLBJKB_02868 at 2989.268 kb on - strand, within OHPLBJKB_02868 at 2989.268 kb on - strand, within OHPLBJKB_02868 at 2989.279 kb on + strand, within OHPLBJKB_02868 at 2989.279 kb on + strand, within OHPLBJKB_02868 at 2989.280 kb on - strand, within OHPLBJKB_02868 at 2989.361 kb on + strand, within OHPLBJKB_02868 at 2989.361 kb on + strand, within OHPLBJKB_02868 at 2989.367 kb on + strand, within OHPLBJKB_02868 at 2989.494 kb on + strand, within OHPLBJKB_02868 at 2989.494 kb on + strand, within OHPLBJKB_02868 at 2989.494 kb on + strand, within OHPLBJKB_02868 at 2989.495 kb on - strand, within OHPLBJKB_02868 at 2989.495 kb on - strand, within OHPLBJKB_02868 at 2989.495 kb on - strand, within OHPLBJKB_02868 at 2989.496 kb on + strand, within OHPLBJKB_02868 at 2989.496 kb on + strand, within OHPLBJKB_02868 at 2989.497 kb on - strand, within OHPLBJKB_02868 at 2989.536 kb on + strand, within OHPLBJKB_02868 at 2989.537 kb on - strand, within OHPLBJKB_02868 at 2989.667 kb on - strand, within OHPLBJKB_02868 at 2989.713 kb on + strand, within OHPLBJKB_02868 at 2989.713 kb on + strand, within OHPLBJKB_02868 at 2989.781 kb on - strand, within OHPLBJKB_02868 at 2989.897 kb on - strand, within OHPLBJKB_02868 at 2989.928 kb on - strand, within OHPLBJKB_02868 at 2989.950 kb on - strand, within OHPLBJKB_02868 at 2989.992 kb on - strand, within OHPLBJKB_02868 at 2990.013 kb on + strand at 2990.040 kb on + strand at 2990.042 kb on + strand at 2990.042 kb on + strand at 2990.042 kb on + strand at 2990.043 kb on - strand at 2990.043 kb on - strand at 2990.043 kb on - strand at 2990.043 kb on - strand at 2990.083 kb on + strand at 2990.116 kb on + strand at 2990.148 kb on - strand at 2990.168 kb on + strand at 2990.228 kb on + strand at 2990.228 kb on + strand at 2990.228 kb on + strand at 2990.229 kb on - strand at 2990.229 kb on - strand at 2990.243 kb on - strand at 2990.244 kb on + strand at 2990.244 kb on + strand at 2990.244 kb on + strand at 2990.244 kb on + strand at 2990.245 kb on - strand at 2990.245 kb on - strand at 2990.245 kb on - strand at 2990.245 kb on - strand at 2990.266 kb on + strand at 2990.275 kb on + strand at 2990.300 kb on - strand at 2990.322 kb on - strand at 2990.545 kb on + strand, within OHPLBJKB_02869 at 2990.684 kb on + strand, within OHPLBJKB_02869 at 2990.684 kb on + strand, within OHPLBJKB_02869 at 2990.765 kb on - strand, within OHPLBJKB_02869 at 2990.798 kb on - strand, within OHPLBJKB_02869 at 2990.885 kb on + strand, within OHPLBJKB_02869 at 2990.900 kb on + strand, within OHPLBJKB_02869 at 2990.912 kb on + strand, within OHPLBJKB_02869 at 2990.933 kb on + strand, within OHPLBJKB_02869 at 2990.933 kb on + strand, within OHPLBJKB_02869 at 2990.940 kb on + strand, within OHPLBJKB_02869 at 2991.028 kb on + strand at 2991.028 kb on + strand at 2991.051 kb on + strand at 2991.051 kb on + strand at 2991.052 kb on - strand at 2991.056 kb on - strand at 2991.056 kb on - strand at 2991.128 kb on + strand at 2991.128 kb on + strand at 2991.128 kb on + strand at 2991.129 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction HB-P24 MOI10 remove 2,987,939 - OHPLBJKB_02866 0.33 -1.0 2,987,939 - OHPLBJKB_02866 0.33 -1.4 2,987,941 + OHPLBJKB_02866 0.33 +0.4 2,987,941 + OHPLBJKB_02866 0.33 +0.2 2,987,942 - OHPLBJKB_02866 0.33 -0.1 2,988,056 + OHPLBJKB_02866 0.47 -0.5 2,988,059 + OHPLBJKB_02866 0.47 +0.3 2,988,083 - OHPLBJKB_02866 0.50 -0.3 2,988,096 + OHPLBJKB_02866 0.52 -0.2 2,988,096 + OHPLBJKB_02866 0.52 +0.1 2,988,104 - OHPLBJKB_02866 0.53 +0.5 2,988,153 + OHPLBJKB_02866 0.59 -0.5 2,988,165 + OHPLBJKB_02866 0.60 -0.6 2,988,166 - OHPLBJKB_02866 0.61 +0.1 2,988,187 + OHPLBJKB_02866 0.63 +0.0 2,988,187 + OHPLBJKB_02866 0.63 +0.5 2,988,187 + OHPLBJKB_02866 0.63 +1.0 2,988,240 + OHPLBJKB_02866 0.70 +0.3 2,988,240 + OHPLBJKB_02866 0.70 -0.4 2,988,240 + OHPLBJKB_02866 0.70 -0.7 2,988,241 - OHPLBJKB_02866 0.70 -0.2 2,988,244 + OHPLBJKB_02866 0.70 -0.8 2,988,244 + OHPLBJKB_02866 0.70 +1.4 2,988,245 - OHPLBJKB_02866 0.70 +0.1 2,988,461 - -1.1 2,988,534 - -0.4 2,988,560 + -0.2 2,988,620 + OHPLBJKB_02867 0.15 +0.1 2,988,683 - OHPLBJKB_02867 0.37 -1.1 2,988,683 - OHPLBJKB_02867 0.37 +0.1 2,988,744 + OHPLBJKB_02867 0.59 +0.4 2,988,745 - OHPLBJKB_02867 0.59 +0.5 2,988,787 - OHPLBJKB_02867 0.75 -1.1 2,988,809 - OHPLBJKB_02867 0.82 +0.4 2,988,809 - OHPLBJKB_02867 0.82 +1.2 2,988,856 - -1.3 2,988,856 - +0.3 2,988,935 - -0.1 2,988,943 - -0.6 2,988,991 - -0.7 2,989,163 + OHPLBJKB_02868 0.21 -0.6 2,989,167 + OHPLBJKB_02868 0.22 -0.0 2,989,167 + OHPLBJKB_02868 0.22 +2.0 2,989,168 - OHPLBJKB_02868 0.22 -0.6 2,989,168 - OHPLBJKB_02868 0.22 -0.3 2,989,168 - OHPLBJKB_02868 0.22 +3.0 2,989,168 - OHPLBJKB_02868 0.22 +0.2 2,989,168 - OHPLBJKB_02868 0.22 +0.4 2,989,168 - OHPLBJKB_02868 0.22 -0.0 2,989,168 - OHPLBJKB_02868 0.22 +0.0 2,989,171 + OHPLBJKB_02868 0.22 -1.2 2,989,189 + OHPLBJKB_02868 0.24 -0.2 2,989,190 - OHPLBJKB_02868 0.24 +0.3 2,989,190 - OHPLBJKB_02868 0.24 +0.7 2,989,190 - OHPLBJKB_02868 0.24 +1.5 2,989,193 + OHPLBJKB_02868 0.24 -0.7 2,989,194 - OHPLBJKB_02868 0.24 +0.2 2,989,210 - OHPLBJKB_02868 0.25 -0.7 2,989,245 + OHPLBJKB_02868 0.28 +1.6 2,989,263 + OHPLBJKB_02868 0.30 -0.1 2,989,263 + OHPLBJKB_02868 0.30 +0.4 2,989,264 - OHPLBJKB_02868 0.30 +0.3 2,989,268 - OHPLBJKB_02868 0.30 -0.6 2,989,268 - OHPLBJKB_02868 0.30 +0.9 2,989,279 + OHPLBJKB_02868 0.31 +0.8 2,989,279 + OHPLBJKB_02868 0.31 -1.2 2,989,280 - OHPLBJKB_02868 0.31 +0.3 2,989,361 + OHPLBJKB_02868 0.38 +0.8 2,989,361 + OHPLBJKB_02868 0.38 -0.1 2,989,367 + OHPLBJKB_02868 0.38 +0.0 2,989,494 + OHPLBJKB_02868 0.48 -1.0 2,989,494 + OHPLBJKB_02868 0.48 +0.6 2,989,494 + OHPLBJKB_02868 0.48 -0.3 2,989,495 - OHPLBJKB_02868 0.48 +1.0 2,989,495 - OHPLBJKB_02868 0.48 +0.8 2,989,495 - OHPLBJKB_02868 0.48 -0.6 2,989,496 + OHPLBJKB_02868 0.48 -0.6 2,989,496 + OHPLBJKB_02868 0.48 +0.5 2,989,497 - OHPLBJKB_02868 0.49 +0.1 2,989,536 + OHPLBJKB_02868 0.52 +0.1 2,989,537 - OHPLBJKB_02868 0.52 -0.3 2,989,667 - OHPLBJKB_02868 0.62 +1.1 2,989,713 + OHPLBJKB_02868 0.66 -0.5 2,989,713 + OHPLBJKB_02868 0.66 -0.2 2,989,781 - OHPLBJKB_02868 0.72 -0.2 2,989,897 - OHPLBJKB_02868 0.81 +0.6 2,989,928 - OHPLBJKB_02868 0.84 +1.1 2,989,950 - OHPLBJKB_02868 0.85 -0.3 2,989,992 - OHPLBJKB_02868 0.89 -0.6 2,990,013 + -3.3 2,990,040 + -0.4 2,990,042 + -0.3 2,990,042 + -1.4 2,990,042 + +0.1 2,990,043 - -0.3 2,990,043 - +0.3 2,990,043 - -1.0 2,990,043 - -1.2 2,990,083 + -1.5 2,990,116 + -0.2 2,990,148 - +0.3 2,990,168 + -0.5 2,990,228 + +0.7 2,990,228 + +0.4 2,990,228 + +0.3 2,990,229 - +0.4 2,990,229 - +0.4 2,990,243 - -0.5 2,990,244 + +1.4 2,990,244 + -0.1 2,990,244 + -0.6 2,990,244 + -1.5 2,990,245 - -0.0 2,990,245 - -0.6 2,990,245 - -0.3 2,990,245 - +0.4 2,990,266 + +2.0 2,990,275 + -1.2 2,990,300 - -1.3 2,990,322 - -0.7 2,990,545 + OHPLBJKB_02869 0.22 +0.0 2,990,684 + OHPLBJKB_02869 0.45 -0.7 2,990,684 + OHPLBJKB_02869 0.45 -0.6 2,990,765 - OHPLBJKB_02869 0.59 +0.6 2,990,798 - OHPLBJKB_02869 0.64 -0.5 2,990,885 + OHPLBJKB_02869 0.79 -0.4 2,990,900 + OHPLBJKB_02869 0.81 +0.2 2,990,912 + OHPLBJKB_02869 0.83 +0.9 2,990,933 + OHPLBJKB_02869 0.87 -0.3 2,990,933 + OHPLBJKB_02869 0.87 -1.3 2,990,940 + OHPLBJKB_02869 0.88 -0.0 2,991,028 + -1.1 2,991,028 + -0.3 2,991,051 + +0.2 2,991,051 + -0.1 2,991,052 - -0.3 2,991,056 - -0.2 2,991,056 - -1.2 2,991,128 + +0.1 2,991,128 + -0.6 2,991,128 + +0.7 2,991,129 - +0.4
Or see this region's nucleotide sequence