Experiment: HB-P24 MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02745 and OHPLBJKB_02746 overlap by 4 nucleotides OHPLBJKB_02746 and OHPLBJKB_02747 are separated by 135 nucleotides OHPLBJKB_02747 and OHPLBJKB_02748 overlap by 24 nucleotides
OHPLBJKB_02745: OHPLBJKB_02745 - Chromosome partition protein MukF, at 2,866,660 to 2,867,982
_02745
OHPLBJKB_02746: OHPLBJKB_02746 - tRNA 5-carboxymethoxyuridine methyltransferase, at 2,867,979 to 2,868,764
_02746
OHPLBJKB_02747: OHPLBJKB_02747 - hypothetical protein, at 2,868,900 to 2,869,679
_02747
OHPLBJKB_02748: OHPLBJKB_02748 - hypothetical protein, at 2,869,656 to 2,870,549
_02748
Position (kb)
2868
2869
2870 Strain fitness (log2 ratio)
-1
0
1 at 2868.024 kb on - strand at 2868.024 kb on - strand at 2868.024 kb on - strand at 2868.026 kb on - strand at 2868.039 kb on - strand at 2868.042 kb on - strand at 2868.044 kb on - strand at 2868.044 kb on - strand at 2868.044 kb on - strand at 2868.044 kb on - strand at 2868.073 kb on - strand, within OHPLBJKB_02746 at 2868.082 kb on - strand, within OHPLBJKB_02746 at 2868.125 kb on - strand, within OHPLBJKB_02746 at 2868.191 kb on - strand, within OHPLBJKB_02746 at 2868.291 kb on - strand, within OHPLBJKB_02746 at 2868.291 kb on - strand, within OHPLBJKB_02746 at 2868.317 kb on - strand, within OHPLBJKB_02746 at 2868.317 kb on - strand, within OHPLBJKB_02746 at 2868.472 kb on - strand, within OHPLBJKB_02746 at 2868.474 kb on - strand, within OHPLBJKB_02746 at 2868.741 kb on - strand at 2868.810 kb on - strand at 2868.810 kb on - strand at 2868.810 kb on - strand at 2868.849 kb on + strand at 2868.849 kb on + strand at 2868.850 kb on - strand at 2868.872 kb on + strand at 2868.872 kb on + strand at 2868.872 kb on + strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.873 kb on - strand at 2868.875 kb on - strand at 2868.875 kb on - strand at 2868.875 kb on - strand at 2868.875 kb on - strand at 2868.875 kb on - strand at 2868.875 kb on - strand at 2868.875 kb on - strand at 2868.908 kb on + strand at 2868.933 kb on - strand at 2868.933 kb on - strand at 2868.966 kb on - strand at 2869.025 kb on + strand, within OHPLBJKB_02747 at 2869.029 kb on - strand, within OHPLBJKB_02747 at 2869.121 kb on + strand, within OHPLBJKB_02747 at 2869.140 kb on + strand, within OHPLBJKB_02747 at 2869.140 kb on + strand, within OHPLBJKB_02747 at 2869.140 kb on + strand, within OHPLBJKB_02747 at 2869.141 kb on - strand, within OHPLBJKB_02747 at 2869.141 kb on - strand, within OHPLBJKB_02747 at 2869.141 kb on - strand, within OHPLBJKB_02747 at 2869.141 kb on - strand, within OHPLBJKB_02747 at 2869.141 kb on - strand, within OHPLBJKB_02747 at 2869.141 kb on - strand, within OHPLBJKB_02747 at 2869.143 kb on - strand, within OHPLBJKB_02747 at 2869.164 kb on + strand, within OHPLBJKB_02747 at 2869.164 kb on + strand, within OHPLBJKB_02747 at 2869.164 kb on + strand, within OHPLBJKB_02747 at 2869.164 kb on + strand, within OHPLBJKB_02747 at 2869.166 kb on + strand, within OHPLBJKB_02747 at 2869.167 kb on - strand, within OHPLBJKB_02747 at 2869.167 kb on - strand, within OHPLBJKB_02747 at 2869.197 kb on - strand, within OHPLBJKB_02747 at 2869.208 kb on + strand, within OHPLBJKB_02747 at 2869.321 kb on + strand, within OHPLBJKB_02747 at 2869.322 kb on - strand, within OHPLBJKB_02747 at 2869.322 kb on - strand, within OHPLBJKB_02747 at 2869.504 kb on + strand, within OHPLBJKB_02747 at 2869.710 kb on - strand at 2869.756 kb on + strand, within OHPLBJKB_02748 at 2869.756 kb on + strand, within OHPLBJKB_02748 at 2869.756 kb on + strand, within OHPLBJKB_02748 at 2869.756 kb on + strand, within OHPLBJKB_02748 at 2869.757 kb on - strand, within OHPLBJKB_02748 at 2869.757 kb on - strand, within OHPLBJKB_02748 at 2869.757 kb on - strand, within OHPLBJKB_02748 at 2869.807 kb on + strand, within OHPLBJKB_02748 at 2869.861 kb on + strand, within OHPLBJKB_02748 at 2869.862 kb on - strand, within OHPLBJKB_02748 at 2869.884 kb on + strand, within OHPLBJKB_02748 at 2869.944 kb on + strand, within OHPLBJKB_02748 at 2869.956 kb on - strand, within OHPLBJKB_02748 at 2870.061 kb on - strand, within OHPLBJKB_02748 at 2870.085 kb on + strand, within OHPLBJKB_02748 at 2870.135 kb on + strand, within OHPLBJKB_02748 at 2870.323 kb on + strand, within OHPLBJKB_02748 at 2870.323 kb on + strand, within OHPLBJKB_02748 at 2870.323 kb on + strand, within OHPLBJKB_02748 at 2870.323 kb on + strand, within OHPLBJKB_02748 at 2870.324 kb on - strand, within OHPLBJKB_02748 at 2870.324 kb on - strand, within OHPLBJKB_02748 at 2870.324 kb on - strand, within OHPLBJKB_02748 at 2870.324 kb on - strand, within OHPLBJKB_02748 at 2870.324 kb on - strand, within OHPLBJKB_02748 at 2870.324 kb on - strand, within OHPLBJKB_02748 at 2870.327 kb on + strand, within OHPLBJKB_02748 at 2870.328 kb on - strand, within OHPLBJKB_02748 at 2870.328 kb on - strand, within OHPLBJKB_02748 at 2870.402 kb on + strand, within OHPLBJKB_02748 at 2870.449 kb on + strand, within OHPLBJKB_02748 at 2870.449 kb on + strand, within OHPLBJKB_02748 at 2870.449 kb on + strand, within OHPLBJKB_02748 at 2870.495 kb on + strand at 2870.495 kb on + strand at 2870.527 kb on - strand at 2870.565 kb on - strand at 2870.595 kb on + strand at 2870.595 kb on + strand at 2870.597 kb on + strand at 2870.598 kb on - strand at 2870.598 kb on - strand at 2870.598 kb on - strand at 2870.659 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction HB-P24 MOI10 remove 2,868,024 - -0.5 2,868,024 - -1.0 2,868,024 - +0.1 2,868,026 - +0.6 2,868,039 - +0.9 2,868,042 - -0.2 2,868,044 - +0.9 2,868,044 - -0.7 2,868,044 - +1.5 2,868,044 - -0.1 2,868,073 - OHPLBJKB_02746 0.12 -0.0 2,868,082 - OHPLBJKB_02746 0.13 -0.4 2,868,125 - OHPLBJKB_02746 0.19 -0.1 2,868,191 - OHPLBJKB_02746 0.27 -0.1 2,868,291 - OHPLBJKB_02746 0.40 -0.4 2,868,291 - OHPLBJKB_02746 0.40 +0.5 2,868,317 - OHPLBJKB_02746 0.43 -0.7 2,868,317 - OHPLBJKB_02746 0.43 -1.1 2,868,472 - OHPLBJKB_02746 0.63 +0.7 2,868,474 - OHPLBJKB_02746 0.63 -1.4 2,868,741 - -0.4 2,868,810 - +0.8 2,868,810 - -0.6 2,868,810 - +0.1 2,868,849 + +0.2 2,868,849 + -0.8 2,868,850 - -0.2 2,868,872 + -0.3 2,868,872 + -0.4 2,868,872 + -0.8 2,868,873 - +1.2 2,868,873 - -0.5 2,868,873 - -0.1 2,868,873 - +0.1 2,868,873 - +0.2 2,868,873 - +0.8 2,868,873 - -0.1 2,868,873 - -0.4 2,868,873 - -0.7 2,868,875 - -0.3 2,868,875 - +0.2 2,868,875 - -0.1 2,868,875 - -0.1 2,868,875 - +0.5 2,868,875 - -0.7 2,868,875 - -1.2 2,868,908 + +0.2 2,868,933 - -0.4 2,868,933 - -1.4 2,868,966 - -0.0 2,869,025 + OHPLBJKB_02747 0.16 +0.5 2,869,029 - OHPLBJKB_02747 0.17 -0.2 2,869,121 + OHPLBJKB_02747 0.28 -0.1 2,869,140 + OHPLBJKB_02747 0.31 +0.1 2,869,140 + OHPLBJKB_02747 0.31 -0.6 2,869,140 + OHPLBJKB_02747 0.31 -0.8 2,869,141 - OHPLBJKB_02747 0.31 -0.3 2,869,141 - OHPLBJKB_02747 0.31 -0.9 2,869,141 - OHPLBJKB_02747 0.31 +0.2 2,869,141 - OHPLBJKB_02747 0.31 -0.5 2,869,141 - OHPLBJKB_02747 0.31 +0.2 2,869,141 - OHPLBJKB_02747 0.31 -0.6 2,869,143 - OHPLBJKB_02747 0.31 -1.7 2,869,164 + OHPLBJKB_02747 0.34 +0.2 2,869,164 + OHPLBJKB_02747 0.34 +0.4 2,869,164 + OHPLBJKB_02747 0.34 -0.8 2,869,164 + OHPLBJKB_02747 0.34 +1.4 2,869,166 + OHPLBJKB_02747 0.34 -0.4 2,869,167 - OHPLBJKB_02747 0.34 -0.4 2,869,167 - OHPLBJKB_02747 0.34 -1.0 2,869,197 - OHPLBJKB_02747 0.38 +0.6 2,869,208 + OHPLBJKB_02747 0.39 +0.3 2,869,321 + OHPLBJKB_02747 0.54 +0.3 2,869,322 - OHPLBJKB_02747 0.54 +0.9 2,869,322 - OHPLBJKB_02747 0.54 -1.6 2,869,504 + OHPLBJKB_02747 0.77 -0.8 2,869,710 - -1.5 2,869,756 + OHPLBJKB_02748 0.11 -1.1 2,869,756 + OHPLBJKB_02748 0.11 -1.2 2,869,756 + OHPLBJKB_02748 0.11 +0.7 2,869,756 + OHPLBJKB_02748 0.11 -0.4 2,869,757 - OHPLBJKB_02748 0.11 -0.3 2,869,757 - OHPLBJKB_02748 0.11 -1.4 2,869,757 - OHPLBJKB_02748 0.11 +0.9 2,869,807 + OHPLBJKB_02748 0.17 -0.6 2,869,861 + OHPLBJKB_02748 0.23 +0.3 2,869,862 - OHPLBJKB_02748 0.23 -1.4 2,869,884 + OHPLBJKB_02748 0.26 -1.0 2,869,944 + OHPLBJKB_02748 0.32 -0.4 2,869,956 - OHPLBJKB_02748 0.34 -0.1 2,870,061 - OHPLBJKB_02748 0.45 -0.6 2,870,085 + OHPLBJKB_02748 0.48 -0.5 2,870,135 + OHPLBJKB_02748 0.54 -0.2 2,870,323 + OHPLBJKB_02748 0.75 -0.3 2,870,323 + OHPLBJKB_02748 0.75 -0.1 2,870,323 + OHPLBJKB_02748 0.75 +0.6 2,870,323 + OHPLBJKB_02748 0.75 -0.2 2,870,324 - OHPLBJKB_02748 0.75 +0.3 2,870,324 - OHPLBJKB_02748 0.75 +0.2 2,870,324 - OHPLBJKB_02748 0.75 -0.4 2,870,324 - OHPLBJKB_02748 0.75 -1.0 2,870,324 - OHPLBJKB_02748 0.75 -0.2 2,870,324 - OHPLBJKB_02748 0.75 -1.1 2,870,327 + OHPLBJKB_02748 0.75 +0.1 2,870,328 - OHPLBJKB_02748 0.75 -0.4 2,870,328 - OHPLBJKB_02748 0.75 -0.6 2,870,402 + OHPLBJKB_02748 0.83 +0.1 2,870,449 + OHPLBJKB_02748 0.89 -0.8 2,870,449 + OHPLBJKB_02748 0.89 +1.2 2,870,449 + OHPLBJKB_02748 0.89 -0.7 2,870,495 + +0.6 2,870,495 + -0.5 2,870,527 - -1.0 2,870,565 - -0.7 2,870,595 + +0.6 2,870,595 + +0.0 2,870,597 + +0.2 2,870,598 - -0.2 2,870,598 - +0.4 2,870,598 - +0.8 2,870,659 + -0.3
Or see this region's nucleotide sequence