Experiment: NL-CCM_agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06698 and MPMX19_06699 are separated by 12 nucleotides MPMX19_06699 and MPMX19_06700 are separated by 10 nucleotides MPMX19_06700 and MPMX19_06701 are separated by 96 nucleotides MPMX19_06701 and MPMX19_06702 are separated by 40 nucleotides
MPMX19_06698: MPMX19_06698 - hypothetical protein, at 267,560 to 267,949
_06698
MPMX19_06699: MPMX19_06699 - Nickel/cobalt efflux system RcnA, at 267,962 to 268,831
_06699
MPMX19_06700: MPMX19_06700 - Copper-sensing transcriptional repressor RicR, at 268,842 to 269,111
_06700
MPMX19_06701: MPMX19_06701 - hypothetical protein, at 269,208 to 269,687
_06701
MPMX19_06702: MPMX19_06702 - Cadmium-transporting ATPase, at 269,728 to 272,016
_06702
Position (kb) 268
269
270 Strain fitness (log2 ratio) -2
-1
0
1 at 267.891 kb on + strand, within MPMX19_06698 at 267.891 kb on + strand, within MPMX19_06698 at 267.891 kb on + strand, within MPMX19_06698 at 267.891 kb on + strand, within MPMX19_06698 at 267.891 kb on + strand, within MPMX19_06698 at 267.891 kb on + strand, within MPMX19_06698 at 267.891 kb on + strand, within MPMX19_06698 at 267.892 kb on - strand, within MPMX19_06698 at 267.892 kb on - strand, within MPMX19_06698 at 267.892 kb on - strand, within MPMX19_06698 at 267.892 kb on - strand, within MPMX19_06698 at 267.892 kb on - strand, within MPMX19_06698 at 267.892 kb on - strand, within MPMX19_06698 at 267.892 kb on - strand, within MPMX19_06698 at 267.963 kb on + strand at 267.963 kb on + strand at 268.014 kb on + strand at 268.014 kb on + strand at 268.014 kb on + strand at 268.015 kb on - strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.047 kb on + strand at 268.048 kb on - strand at 268.048 kb on - strand at 268.048 kb on - strand at 268.048 kb on - strand at 268.048 kb on - strand at 268.048 kb on - strand at 268.048 kb on - strand at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.083 kb on + strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.084 kb on - strand, within MPMX19_06699 at 268.560 kb on + strand, within MPMX19_06699 at 268.560 kb on + strand, within MPMX19_06699 at 268.560 kb on + strand, within MPMX19_06699 at 268.560 kb on + strand, within MPMX19_06699 at 268.560 kb on + strand, within MPMX19_06699 at 268.560 kb on + strand, within MPMX19_06699 at 268.561 kb on - strand, within MPMX19_06699 at 268.561 kb on - strand, within MPMX19_06699 at 268.561 kb on - strand, within MPMX19_06699 at 268.843 kb on + strand at 268.843 kb on + strand at 268.843 kb on + strand at 268.843 kb on + strand at 268.843 kb on + strand at 268.844 kb on - strand at 268.844 kb on - strand at 268.844 kb on - strand at 268.844 kb on - strand at 268.844 kb on - strand at 268.849 kb on + strand at 268.849 kb on + strand at 268.849 kb on + strand at 268.849 kb on + strand at 268.849 kb on + strand at 268.849 kb on + strand at 268.849 kb on + strand at 268.849 kb on + strand at 268.849 kb on + strand at 268.849 kb on + strand at 268.849 kb on + strand at 268.849 kb on + strand at 268.849 kb on + strand at 268.850 kb on - strand at 268.850 kb on - strand at 268.850 kb on - strand at 268.850 kb on - strand at 269.042 kb on + strand, within MPMX19_06700 at 269.042 kb on + strand, within MPMX19_06700 at 269.043 kb on - strand, within MPMX19_06700 at 269.263 kb on + strand, within MPMX19_06701 at 269.263 kb on + strand, within MPMX19_06701 at 269.263 kb on + strand, within MPMX19_06701 at 269.263 kb on + strand, within MPMX19_06701 at 269.263 kb on + strand, within MPMX19_06701 at 269.264 kb on - strand, within MPMX19_06701 at 269.264 kb on - strand, within MPMX19_06701 at 269.264 kb on - strand, within MPMX19_06701 at 269.264 kb on - strand, within MPMX19_06701 at 269.264 kb on - strand, within MPMX19_06701 at 269.264 kb on - strand, within MPMX19_06701 at 269.264 kb on - strand, within MPMX19_06701 at 269.264 kb on - strand, within MPMX19_06701 at 269.282 kb on + strand, within MPMX19_06701 at 269.282 kb on + strand, within MPMX19_06701 at 269.282 kb on + strand, within MPMX19_06701 at 269.283 kb on - strand, within MPMX19_06701 at 269.395 kb on + strand, within MPMX19_06701 at 269.395 kb on + strand, within MPMX19_06701 at 269.395 kb on + strand, within MPMX19_06701 at 269.395 kb on + strand, within MPMX19_06701 at 269.395 kb on + strand, within MPMX19_06701 at 269.395 kb on + strand, within MPMX19_06701 at 269.395 kb on + strand, within MPMX19_06701 at 269.395 kb on + strand, within MPMX19_06701 at 269.395 kb on + strand, within MPMX19_06701 at 269.395 kb on + strand, within MPMX19_06701 at 269.395 kb on + strand, within MPMX19_06701 at 269.396 kb on - strand, within MPMX19_06701 at 269.396 kb on - strand, within MPMX19_06701 at 269.396 kb on - strand, within MPMX19_06701 at 269.396 kb on - strand, within MPMX19_06701 at 269.396 kb on - strand, within MPMX19_06701 at 269.835 kb on + strand at 269.836 kb on - strand at 269.836 kb on - strand at 269.836 kb on - strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.884 kb on + strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand at 269.885 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM_agar remove 267,891 + MPMX19_06698 0.85 -0.6 267,891 + MPMX19_06698 0.85 -1.1 267,891 + MPMX19_06698 0.85 +0.3 267,891 + MPMX19_06698 0.85 -0.5 267,891 + MPMX19_06698 0.85 -0.6 267,891 + MPMX19_06698 0.85 -1.0 267,891 + MPMX19_06698 0.85 -0.6 267,892 - MPMX19_06698 0.85 -0.0 267,892 - MPMX19_06698 0.85 +0.5 267,892 - MPMX19_06698 0.85 -0.4 267,892 - MPMX19_06698 0.85 -1.0 267,892 - MPMX19_06698 0.85 -0.4 267,892 - MPMX19_06698 0.85 -0.3 267,892 - MPMX19_06698 0.85 +0.6 267,963 + -0.4 267,963 + -0.6 268,014 + +0.3 268,014 + -0.6 268,014 + -0.7 268,015 - -1.4 268,047 + +0.6 268,047 + -1.0 268,047 + +0.0 268,047 + -0.0 268,047 + -0.6 268,047 + -0.0 268,047 + -0.6 268,047 + +0.2 268,047 + -2.0 268,048 - -0.1 268,048 - -0.2 268,048 - -0.8 268,048 - +0.2 268,048 - +0.2 268,048 - -1.4 268,048 - +0.2 268,083 + MPMX19_06699 0.14 -0.3 268,083 + MPMX19_06699 0.14 -0.0 268,083 + MPMX19_06699 0.14 -1.0 268,083 + MPMX19_06699 0.14 -0.1 268,083 + MPMX19_06699 0.14 -1.3 268,083 + MPMX19_06699 0.14 +0.9 268,083 + MPMX19_06699 0.14 +0.0 268,083 + MPMX19_06699 0.14 +0.9 268,083 + MPMX19_06699 0.14 -0.6 268,083 + MPMX19_06699 0.14 -0.3 268,083 + MPMX19_06699 0.14 +1.0 268,084 - MPMX19_06699 0.14 -0.0 268,084 - MPMX19_06699 0.14 +0.6 268,084 - MPMX19_06699 0.14 +0.6 268,084 - MPMX19_06699 0.14 -0.8 268,084 - MPMX19_06699 0.14 -0.3 268,084 - MPMX19_06699 0.14 +0.6 268,084 - MPMX19_06699 0.14 +0.3 268,084 - MPMX19_06699 0.14 -0.9 268,084 - MPMX19_06699 0.14 -0.1 268,084 - MPMX19_06699 0.14 +1.1 268,084 - MPMX19_06699 0.14 -1.0 268,084 - MPMX19_06699 0.14 -0.2 268,560 + MPMX19_06699 0.69 +1.6 268,560 + MPMX19_06699 0.69 +0.3 268,560 + MPMX19_06699 0.69 +1.0 268,560 + MPMX19_06699 0.69 -0.3 268,560 + MPMX19_06699 0.69 +0.6 268,560 + MPMX19_06699 0.69 +0.7 268,561 - MPMX19_06699 0.69 -0.9 268,561 - MPMX19_06699 0.69 +1.7 268,561 - MPMX19_06699 0.69 +0.1 268,843 + +0.8 268,843 + -0.9 268,843 + -1.3 268,843 + -0.2 268,843 + -0.7 268,844 - +0.3 268,844 - +0.4 268,844 - -0.1 268,844 - +1.0 268,844 - -1.4 268,849 + +0.1 268,849 + -0.0 268,849 + +0.4 268,849 + -0.4 268,849 + -0.3 268,849 + -1.6 268,849 + -0.2 268,849 + -0.7 268,849 + -0.4 268,849 + +0.7 268,849 + -0.4 268,849 + -0.4 268,849 + -1.2 268,850 - -0.9 268,850 - -1.4 268,850 - -0.4 268,850 - +0.3 269,042 + MPMX19_06700 0.74 -0.5 269,042 + MPMX19_06700 0.74 -1.9 269,043 - MPMX19_06700 0.74 -0.8 269,263 + MPMX19_06701 0.11 -1.6 269,263 + MPMX19_06701 0.11 -0.6 269,263 + MPMX19_06701 0.11 -0.8 269,263 + MPMX19_06701 0.11 +0.3 269,263 + MPMX19_06701 0.11 +0.1 269,264 - MPMX19_06701 0.12 -1.4 269,264 - MPMX19_06701 0.12 -0.4 269,264 - MPMX19_06701 0.12 +0.3 269,264 - MPMX19_06701 0.12 -2.5 269,264 - MPMX19_06701 0.12 -0.0 269,264 - MPMX19_06701 0.12 -0.4 269,264 - MPMX19_06701 0.12 +0.1 269,264 - MPMX19_06701 0.12 -1.4 269,282 + MPMX19_06701 0.15 +0.2 269,282 + MPMX19_06701 0.15 -0.3 269,282 + MPMX19_06701 0.15 +0.4 269,283 - MPMX19_06701 0.16 -2.4 269,395 + MPMX19_06701 0.39 -0.3 269,395 + MPMX19_06701 0.39 +0.5 269,395 + MPMX19_06701 0.39 -2.0 269,395 + MPMX19_06701 0.39 +0.3 269,395 + MPMX19_06701 0.39 +1.4 269,395 + MPMX19_06701 0.39 -0.3 269,395 + MPMX19_06701 0.39 -0.1 269,395 + MPMX19_06701 0.39 +0.6 269,395 + MPMX19_06701 0.39 +1.4 269,395 + MPMX19_06701 0.39 -0.8 269,395 + MPMX19_06701 0.39 +0.2 269,396 - MPMX19_06701 0.39 +0.1 269,396 - MPMX19_06701 0.39 -1.2 269,396 - MPMX19_06701 0.39 -0.2 269,396 - MPMX19_06701 0.39 +1.3 269,396 - MPMX19_06701 0.39 -0.8 269,835 + -0.2 269,836 - +0.4 269,836 - +0.3 269,836 - -0.6 269,884 + -1.0 269,884 + -0.7 269,884 + -0.2 269,884 + +0.4 269,884 + -0.3 269,884 + +0.1 269,884 + +0.3 269,884 + +0.1 269,884 + +0.5 269,884 + -0.8 269,884 + -0.6 269,884 + +0.2 269,884 + +0.1 269,884 + -1.0 269,884 + -0.2 269,884 + -1.2 269,884 + +0.2 269,884 + +1.0 269,884 + -1.1 269,884 + -1.1 269,884 + +0.2 269,884 + +0.2 269,884 + -1.4 269,884 + -0.6 269,884 + -0.8 269,884 + -0.1 269,884 + +0.6 269,884 + +0.1 269,884 + -0.3 269,884 + +0.6 269,884 + +0.8 269,884 + -0.4 269,884 + +0.1 269,884 + -0.0 269,884 + +0.6 269,884 + +0.1 269,884 + -0.9 269,884 + -0.1 269,884 + -0.2 269,884 + +0.1 269,884 + +0.2 269,885 - -0.4 269,885 - -1.6 269,885 - +0.1 269,885 - -0.7 269,885 - -1.0 269,885 - -0.6 269,885 - -1.2 269,885 - -0.9 269,885 - -0.9 269,885 - -0.7 269,885 - -1.3 269,885 - -0.6 269,885 - -1.4 269,885 - +0.4 269,885 - -0.2 269,885 - +0.2 269,885 - -0.3 269,885 - -0.6 269,885 - +0.1 269,885 - +0.7 269,885 - +1.4 269,885 - -0.9 269,885 - -0.4 269,885 - -1.8 269,885 - -1.9 269,885 - -0.8 269,885 - -1.8 269,885 - -1.9 269,885 - -0.0 269,885 - -1.5 269,885 - -0.3 269,885 - +0.9 269,885 - -0.6 269,885 - +0.1 269,885 - -0.4 269,885 - +0.8 269,885 - -0.8 269,885 - -0.9 269,885 - -0.4 269,885 - -0.7
Or see this region's nucleotide sequence