Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02631

Experiment: NL-CCM_agar

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_02630 and MPMX19_02631 are separated by 81 nucleotidesMPMX19_02631 and MPMX19_02632 are separated by 107 nucleotides MPMX19_02630: MPMX19_02630 - Aerobic cobaltochelatase subunit CobT, at 2,748,840 to 2,750,711 _02630 MPMX19_02631: MPMX19_02631 - hypothetical protein, at 2,750,793 to 2,751,188 _02631 MPMX19_02632: MPMX19_02632 - Aerobic cobaltochelatase subunit CobS, at 2,751,296 to 2,752,300 _02632 Position (kb) 2750 2751 2752Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 2750.736 kb on - strandat 2750.736 kb on - strandat 2750.736 kb on - strandat 2750.741 kb on + strandat 2750.781 kb on + strandat 2750.782 kb on - strandat 2750.782 kb on - strandat 2750.817 kb on + strandat 2750.817 kb on + strandat 2750.818 kb on - strandat 2750.818 kb on - strandat 2750.818 kb on - strandat 2750.890 kb on + strand, within MPMX19_02631at 2750.890 kb on + strand, within MPMX19_02631at 2750.890 kb on + strand, within MPMX19_02631at 2750.890 kb on + strand, within MPMX19_02631at 2750.890 kb on + strand, within MPMX19_02631at 2750.890 kb on + strand, within MPMX19_02631at 2750.891 kb on - strand, within MPMX19_02631at 2750.891 kb on - strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.907 kb on + strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.908 kb on - strand, within MPMX19_02631at 2750.983 kb on + strand, within MPMX19_02631at 2750.983 kb on + strand, within MPMX19_02631at 2750.983 kb on + strand, within MPMX19_02631at 2750.983 kb on + strand, within MPMX19_02631at 2750.983 kb on + strand, within MPMX19_02631at 2750.983 kb on + strand, within MPMX19_02631at 2750.983 kb on + strand, within MPMX19_02631at 2750.983 kb on + strand, within MPMX19_02631at 2750.983 kb on + strand, within MPMX19_02631at 2750.983 kb on + strand, within MPMX19_02631at 2750.983 kb on + strand, within MPMX19_02631at 2750.984 kb on - strand, within MPMX19_02631at 2750.984 kb on - strand, within MPMX19_02631at 2750.984 kb on - strand, within MPMX19_02631at 2750.984 kb on - strand, within MPMX19_02631at 2751.007 kb on + strand, within MPMX19_02631at 2751.007 kb on + strand, within MPMX19_02631at 2751.007 kb on + strand, within MPMX19_02631at 2751.024 kb on + strand, within MPMX19_02631at 2751.025 kb on - strand, within MPMX19_02631at 2751.025 kb on - strand, within MPMX19_02631at 2751.025 kb on - strand, within MPMX19_02631at 2751.080 kb on + strand, within MPMX19_02631at 2751.080 kb on + strand, within MPMX19_02631at 2751.081 kb on - strand, within MPMX19_02631at 2751.081 kb on - strand, within MPMX19_02631at 2751.081 kb on - strand, within MPMX19_02631at 2751.082 kb on + strand, within MPMX19_02631at 2751.082 kb on + strand, within MPMX19_02631at 2751.082 kb on + strand, within MPMX19_02631at 2751.082 kb on + strand, within MPMX19_02631at 2751.082 kb on + strand, within MPMX19_02631at 2751.082 kb on + strand, within MPMX19_02631at 2751.082 kb on + strand, within MPMX19_02631at 2751.082 kb on + strand, within MPMX19_02631at 2751.083 kb on - strand, within MPMX19_02631at 2751.083 kb on - strand, within MPMX19_02631at 2751.083 kb on - strand, within MPMX19_02631at 2751.083 kb on - strand, within MPMX19_02631at 2751.120 kb on + strand, within MPMX19_02631at 2751.120 kb on + strand, within MPMX19_02631at 2751.120 kb on + strand, within MPMX19_02631at 2751.120 kb on + strand, within MPMX19_02631at 2751.121 kb on - strand, within MPMX19_02631at 2751.121 kb on - strand, within MPMX19_02631at 2751.121 kb on - strand, within MPMX19_02631at 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.205 kb on + strandat 2751.206 kb on - strandat 2751.206 kb on - strandat 2751.206 kb on - strandat 2751.206 kb on - strandat 2751.206 kb on - strandat 2751.206 kb on - strandat 2751.206 kb on - strandat 2751.206 kb on - strandat 2751.206 kb on - strandat 2751.206 kb on - strandat 2751.206 kb on - strandat 2751.206 kb on - strandat 2751.206 kb on - strandat 2751.206 kb on - strandat 2751.206 kb on - strandat 2751.206 kb on - strandat 2751.207 kb on + strandat 2751.207 kb on + strandat 2751.207 kb on + strandat 2751.207 kb on + strandat 2751.207 kb on + strandat 2751.208 kb on - strandat 2751.208 kb on - strandat 2751.208 kb on - strandat 2751.208 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM_agar
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2,750,736 - -0.9
2,750,736 - +0.7
2,750,736 - -0.1
2,750,741 + +1.1
2,750,781 + +1.4
2,750,782 - -0.2
2,750,782 - -0.9
2,750,817 + +0.1
2,750,817 + +0.1
2,750,818 - +0.1
2,750,818 - +0.1
2,750,818 - +0.1
2,750,890 + MPMX19_02631 0.24 +0.1
2,750,890 + MPMX19_02631 0.24 +0.7
2,750,890 + MPMX19_02631 0.24 +1.7
2,750,890 + MPMX19_02631 0.24 -0.6
2,750,890 + MPMX19_02631 0.24 +1.8
2,750,890 + MPMX19_02631 0.24 +1.4
2,750,891 - MPMX19_02631 0.25 +1.0
2,750,891 - MPMX19_02631 0.25 +0.8
2,750,907 + MPMX19_02631 0.29 -0.2
2,750,907 + MPMX19_02631 0.29 -0.1
2,750,907 + MPMX19_02631 0.29 -1.3
2,750,907 + MPMX19_02631 0.29 -0.1
2,750,907 + MPMX19_02631 0.29 -0.3
2,750,907 + MPMX19_02631 0.29 +2.7
2,750,907 + MPMX19_02631 0.29 +0.1
2,750,907 + MPMX19_02631 0.29 +1.5
2,750,907 + MPMX19_02631 0.29 -0.4
2,750,907 + MPMX19_02631 0.29 -0.5
2,750,907 + MPMX19_02631 0.29 +0.8
2,750,907 + MPMX19_02631 0.29 -1.1
2,750,907 + MPMX19_02631 0.29 +0.9
2,750,907 + MPMX19_02631 0.29 -0.3
2,750,907 + MPMX19_02631 0.29 -0.1
2,750,907 + MPMX19_02631 0.29 +0.7
2,750,907 + MPMX19_02631 0.29 -0.6
2,750,907 + MPMX19_02631 0.29 +0.4
2,750,907 + MPMX19_02631 0.29 +1.4
2,750,907 + MPMX19_02631 0.29 +0.1
2,750,907 + MPMX19_02631 0.29 -1.6
2,750,907 + MPMX19_02631 0.29 +0.5
2,750,907 + MPMX19_02631 0.29 -1.3
2,750,907 + MPMX19_02631 0.29 +0.1
2,750,907 + MPMX19_02631 0.29 +1.1
2,750,907 + MPMX19_02631 0.29 -0.8
2,750,907 + MPMX19_02631 0.29 -0.3
2,750,907 + MPMX19_02631 0.29 -0.6
2,750,907 + MPMX19_02631 0.29 +1.4
2,750,907 + MPMX19_02631 0.29 -0.3
2,750,907 + MPMX19_02631 0.29 -0.1
2,750,907 + MPMX19_02631 0.29 +1.1
2,750,907 + MPMX19_02631 0.29 +1.7
2,750,908 - MPMX19_02631 0.29 -0.9
2,750,908 - MPMX19_02631 0.29 -0.9
2,750,908 - MPMX19_02631 0.29 -0.4
2,750,908 - MPMX19_02631 0.29 +1.5
2,750,908 - MPMX19_02631 0.29 -1.9
2,750,908 - MPMX19_02631 0.29 -0.0
2,750,908 - MPMX19_02631 0.29 +0.9
2,750,908 - MPMX19_02631 0.29 -0.1
2,750,908 - MPMX19_02631 0.29 +0.9
2,750,908 - MPMX19_02631 0.29 +1.7
2,750,908 - MPMX19_02631 0.29 +0.4
2,750,908 - MPMX19_02631 0.29 -0.3
2,750,908 - MPMX19_02631 0.29 -0.8
2,750,908 - MPMX19_02631 0.29 +1.3
2,750,908 - MPMX19_02631 0.29 -0.8
2,750,908 - MPMX19_02631 0.29 +0.5
2,750,908 - MPMX19_02631 0.29 +0.3
2,750,908 - MPMX19_02631 0.29 -0.1
2,750,908 - MPMX19_02631 0.29 -0.5
2,750,908 - MPMX19_02631 0.29 +0.2
2,750,908 - MPMX19_02631 0.29 -1.9
2,750,908 - MPMX19_02631 0.29 +0.3
2,750,908 - MPMX19_02631 0.29 -1.3
2,750,983 + MPMX19_02631 0.48 +0.1
2,750,983 + MPMX19_02631 0.48 +1.3
2,750,983 + MPMX19_02631 0.48 +0.2
2,750,983 + MPMX19_02631 0.48 +0.9
2,750,983 + MPMX19_02631 0.48 +1.4
2,750,983 + MPMX19_02631 0.48 +1.4
2,750,983 + MPMX19_02631 0.48 -0.8
2,750,983 + MPMX19_02631 0.48 +1.4
2,750,983 + MPMX19_02631 0.48 -0.1
2,750,983 + MPMX19_02631 0.48 -0.6
2,750,983 + MPMX19_02631 0.48 -0.4
2,750,984 - MPMX19_02631 0.48 +0.1
2,750,984 - MPMX19_02631 0.48 -1.1
2,750,984 - MPMX19_02631 0.48 -1.0
2,750,984 - MPMX19_02631 0.48 -0.2
2,751,007 + MPMX19_02631 0.54 -0.2
2,751,007 + MPMX19_02631 0.54 +0.4
2,751,007 + MPMX19_02631 0.54 -0.3
2,751,024 + MPMX19_02631 0.58 +0.7
2,751,025 - MPMX19_02631 0.59 +0.2
2,751,025 - MPMX19_02631 0.59 -1.1
2,751,025 - MPMX19_02631 0.59 +0.8
2,751,080 + MPMX19_02631 0.72 -0.4
2,751,080 + MPMX19_02631 0.72 +0.8
2,751,081 - MPMX19_02631 0.73 +0.5
2,751,081 - MPMX19_02631 0.73 +0.4
2,751,081 - MPMX19_02631 0.73 -0.8
2,751,082 + MPMX19_02631 0.73 -0.4
2,751,082 + MPMX19_02631 0.73 +0.7
2,751,082 + MPMX19_02631 0.73 -0.9
2,751,082 + MPMX19_02631 0.73 +4.0
2,751,082 + MPMX19_02631 0.73 -0.5
2,751,082 + MPMX19_02631 0.73 -0.9
2,751,082 + MPMX19_02631 0.73 +2.0
2,751,082 + MPMX19_02631 0.73 -1.6
2,751,083 - MPMX19_02631 0.73 +0.4
2,751,083 - MPMX19_02631 0.73 +0.4
2,751,083 - MPMX19_02631 0.73 -1.0
2,751,083 - MPMX19_02631 0.73 +0.6
2,751,120 + MPMX19_02631 0.83 +2.3
2,751,120 + MPMX19_02631 0.83 +0.0
2,751,120 + MPMX19_02631 0.83 +0.1
2,751,120 + MPMX19_02631 0.83 +0.3
2,751,121 - MPMX19_02631 0.83 -1.1
2,751,121 - MPMX19_02631 0.83 -0.6
2,751,121 - MPMX19_02631 0.83 +0.2
2,751,205 + -0.3
2,751,205 + -0.1
2,751,205 + -0.3
2,751,205 + +0.7
2,751,205 + +0.8
2,751,205 + +1.5
2,751,205 + +0.1
2,751,205 + +0.4
2,751,205 + -0.3
2,751,205 + +2.3
2,751,205 + -0.1
2,751,205 + -0.1
2,751,205 + -1.0
2,751,205 + -0.9
2,751,205 + +0.4
2,751,205 + +0.9
2,751,205 + +0.3
2,751,205 + +0.2
2,751,205 + +0.5
2,751,205 + +0.7
2,751,205 + +0.9
2,751,205 + +0.1
2,751,205 + +0.3
2,751,206 - -1.5
2,751,206 - +0.2
2,751,206 - +0.8
2,751,206 - +0.6
2,751,206 - -1.6
2,751,206 - -0.8
2,751,206 - +1.7
2,751,206 - -0.3
2,751,206 - +0.4
2,751,206 - +0.2
2,751,206 - +0.1
2,751,206 - -0.5
2,751,206 - -0.1
2,751,206 - +0.1
2,751,206 - +0.5
2,751,206 - -0.1
2,751,207 + +0.4
2,751,207 + +0.0
2,751,207 + +0.1
2,751,207 + +2.0
2,751,207 + -0.5
2,751,208 - +1.7
2,751,208 - +0.1
2,751,208 - -0.1
2,751,208 - -0.3

Or see this region's nucleotide sequence