Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02142

Experiment: NL-CCM_agar

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM_agar
2,240,439	+				-0.4
2,240,440	-				-1.1
2,240,440	-				-1.5
2,240,440	-				+1.6
2,240,538	+				+0.2
2,240,538	+				-0.4
2,240,538	+				-1.8
2,240,538	+				-0.3
2,240,539	-				+1.0
2,240,539	-				-0.6
2,240,740	-		MPMX19_02142	0.14	-0.9
2,240,740	-		MPMX19_02142	0.14	-0.8
2,240,779	+		MPMX19_02142	0.17	-0.9
2,240,779	+		MPMX19_02142	0.17	-0.3
2,240,780	-		MPMX19_02142	0.17	-0.3
2,240,780	-		MPMX19_02142	0.17	-0.5
2,241,201	+		MPMX19_02142	0.46	+1.1
2,241,201	+		MPMX19_02142	0.46	-0.4
2,241,201	+		MPMX19_02142	0.46	+0.1
2,241,201	+		MPMX19_02142	0.46	-3.3
2,241,201	+		MPMX19_02142	0.46	+2.1
2,241,201	+		MPMX19_02142	0.46	-0.2
2,241,201	+		MPMX19_02142	0.46	+0.3
2,241,201	+		MPMX19_02142	0.46	+0.2
2,241,201	+		MPMX19_02142	0.46	-0.2
2,241,201	+		MPMX19_02142	0.46	+0.1
2,241,201	+		MPMX19_02142	0.46	-1.0
2,241,201	+		MPMX19_02142	0.46	-1.3
2,241,201	+		MPMX19_02142	0.46	-0.3
2,241,201	+		MPMX19_02142	0.46	+1.6
2,241,201	+		MPMX19_02142	0.46	-0.6
2,241,202	-		MPMX19_02142	0.47	-1.3
2,241,202	-		MPMX19_02142	0.47	-0.5
2,241,202	-		MPMX19_02142	0.47	-0.0
2,241,202	-		MPMX19_02142	0.47	+1.0
2,241,202	-		MPMX19_02142	0.47	-0.3
2,241,202	-		MPMX19_02142	0.47	-0.0
2,241,202	-		MPMX19_02142	0.47	+2.0
2,241,202	-		MPMX19_02142	0.47	-2.1
2,241,202	-		MPMX19_02142	0.47	-1.5
2,241,353	+		MPMX19_02142	0.57	-1.8
2,241,353	+		MPMX19_02142	0.57	+0.2
2,241,353	+		MPMX19_02142	0.57	+0.1
2,241,353	+		MPMX19_02142	0.57	-0.3
2,241,353	+		MPMX19_02142	0.57	+1.3
2,241,353	+		MPMX19_02142	0.57	+1.0
2,241,353	+		MPMX19_02142	0.57	-0.0
2,241,354	-		MPMX19_02142	0.57	-1.4
2,241,354	-		MPMX19_02142	0.57	-0.0
2,241,354	-		MPMX19_02142	0.57	-1.8
2,241,354	-		MPMX19_02142	0.57	+0.9
2,241,354	-		MPMX19_02142	0.57	-0.9
2,241,354	-		MPMX19_02142	0.57	-1.0
2,241,354	-		MPMX19_02142	0.57	-0.8
2,241,354	-		MPMX19_02142	0.57	+0.5
2,241,354	-		MPMX19_02142	0.57	-0.6
2,241,354	-		MPMX19_02142	0.57	-2.0
2,241,354	-		MPMX19_02142	0.57	+0.4
2,241,369	+		MPMX19_02142	0.58	-0.3
2,241,369	+		MPMX19_02142	0.58	-1.3
2,241,369	+		MPMX19_02142	0.58	-0.9
2,241,369	+		MPMX19_02142	0.58	-1.3
2,241,369	+		MPMX19_02142	0.58	+0.9
2,241,369	+		MPMX19_02142	0.58	-1.5
2,241,369	+		MPMX19_02142	0.58	-0.4
2,241,370	-		MPMX19_02142	0.58	-0.1
2,241,370	-		MPMX19_02142	0.58	-1.1
2,241,370	-		MPMX19_02142	0.58	-1.0
2,241,492	+		MPMX19_02142	0.67	-0.1
2,241,492	+		MPMX19_02142	0.67	-1.0
2,241,492	+		MPMX19_02142	0.67	-0.0
2,241,492	+		MPMX19_02142	0.67	-0.9
2,241,492	+		MPMX19_02142	0.67	-1.4
2,241,492	+		MPMX19_02142	0.67	-2.6
2,241,492	+		MPMX19_02142	0.67	-0.9
2,241,492	+		MPMX19_02142	0.67	-1.8
2,241,492	+		MPMX19_02142	0.67	-0.9
2,241,493	-		MPMX19_02142	0.67	+0.7
2,241,493	-		MPMX19_02142	0.67	+0.6
2,241,493	-		MPMX19_02142	0.67	-2.3
2,241,493	-		MPMX19_02142	0.67	-2.8
2,241,493	-		MPMX19_02142	0.67	+0.1
2,241,493	-		MPMX19_02142	0.67	-0.3
2,241,493	-		MPMX19_02142	0.67	-2.4
2,241,493	-		MPMX19_02142	0.67	+0.6
2,241,493	-		MPMX19_02142	0.67	-2.7
2,241,681	+		MPMX19_02142	0.80	+0.7
2,241,681	+		MPMX19_02142	0.80	+0.2
2,241,681	+		MPMX19_02142	0.80	+0.2
2,241,681	+		MPMX19_02142	0.80	+1.0
2,241,681	+		MPMX19_02142	0.80	-2.0
2,241,681	+		MPMX19_02142	0.80	+0.4
2,241,681	+		MPMX19_02142	0.80	+0.6
2,241,681	+		MPMX19_02142	0.80	-0.3
2,241,681	+		MPMX19_02142	0.80	+0.6
2,241,681	+		MPMX19_02142	0.80	-1.4
2,241,682	-		MPMX19_02142	0.80	+0.2
2,241,682	-		MPMX19_02142	0.80	+0.1
2,241,682	-		MPMX19_02142	0.80	-1.0
2,241,682	-		MPMX19_02142	0.80	-0.3
2,241,682	-		MPMX19_02142	0.80	-0.3
2,241,682	-		MPMX19_02142	0.80	-0.9
2,241,873	+				+0.3
2,241,873	+				+0.1
2,241,873	+				+0.6
2,241,873	+				-1.1
2,241,874	-				+0.7
2,241,874	-				+0.6
2,242,184	+				+1.2
2,242,184	+				-0.9
2,242,184	+				+0.4
2,242,184	+				-0.4
2,242,184	+				+0.3
2,242,184	+				-1.2
2,242,184	+				+0.2
2,242,184	+				-0.0
2,242,184	+				-0.2
2,242,184	+				+0.2
2,242,184	+				-0.6
2,242,184	+				-0.0
2,242,185	-				-0.9
2,242,185	-				+0.6
2,242,185	-				-1.2
2,242,185	-				-0.7
2,242,185	-				-0.3
2,242,185	-				-0.0
2,242,185	-				+0.3
2,242,185	-				-0.2
2,242,254	+				-1.2
2,242,254	+				+0.6
2,242,254	+				+0.1
2,242,254	+				-0.8
2,242,254	+				-0.9
2,242,254	+				+0.3
2,242,255	-				-0.2
2,242,255	-				-0.2
2,242,255	-				-0.2
2,242,255	-				+0.6
2,242,255	-				-1.1
2,242,255	-				-1.4
2,242,255	-				-0.9
2,242,350	+				+0.2
2,242,350	+				+1.0
2,242,350	+				-2.4
2,242,350	+				-0.4
2,242,350	+				+0.6
2,242,350	+				-0.1
2,242,350	+				+0.1
2,242,350	+				-0.6
2,242,350	+				+0.3
2,242,350	+				-0.7
2,242,350	+				-0.8
2,242,350	+				-1.0
2,242,350	+				+0.9
2,242,350	+				-0.6
2,242,351	-				-0.2
2,242,351	-				+0.6
2,242,351	-				+1.6
2,242,351	-				-0.1
2,242,351	-				-1.4
2,242,351	-				+0.8
2,242,351	-				-1.0
2,242,351	-				-0.8
2,242,351	-				+0.6
2,242,351	-				+0.2
2,242,351	-				-1.7
2,242,351	-				+0.6
2,242,351	-				-0.6
2,242,351	-				-0.0
2,242,407	+		MPMX19_02143	0.21	+1.2
2,242,407	+		MPMX19_02143	0.21	-0.4
2,242,407	+		MPMX19_02143	0.21	-1.7
2,242,407	+		MPMX19_02143	0.21	-0.9
2,242,407	+		MPMX19_02143	0.21	-0.3
2,242,407	+		MPMX19_02143	0.21	-1.4
2,242,407	+		MPMX19_02143	0.21	-0.0
2,242,407	+		MPMX19_02143	0.21	-0.7
2,242,407	+		MPMX19_02143	0.21	-2.0
2,242,407	+		MPMX19_02143	0.21	-1.5
2,242,407	+		MPMX19_02143	0.21	-0.4
2,242,407	+		MPMX19_02143	0.21	+0.6
2,242,407	+		MPMX19_02143	0.21	-0.0
2,242,407	+		MPMX19_02143	0.21	+1.1
2,242,407	+		MPMX19_02143	0.21	-2.9
2,242,407	+		MPMX19_02143	0.21	-0.0
2,242,407	+		MPMX19_02143	0.21	-0.2
2,242,407	+		MPMX19_02143	0.21	-0.3
2,242,407	+		MPMX19_02143	0.21	+0.0
2,242,407	+		MPMX19_02143	0.21	+0.6
2,242,407	+		MPMX19_02143	0.21	-0.3
2,242,407	+		MPMX19_02143	0.21	+0.1
2,242,408	-		MPMX19_02143	0.21	+1.2
2,242,408	-		MPMX19_02143	0.21	-0.4
2,242,408	-		MPMX19_02143	0.21	+0.2
2,242,408	-		MPMX19_02143	0.21	+0.2
2,242,408	-		MPMX19_02143	0.21	+0.9
2,242,408	-		MPMX19_02143	0.21	-0.9
2,242,408	-		MPMX19_02143	0.21	-0.3
2,242,408	-		MPMX19_02143	0.21	+0.9
2,242,408	-		MPMX19_02143	0.21	-1.7
2,242,408	-		MPMX19_02143	0.21	+1.7
2,242,408	-		MPMX19_02143	0.21	-0.0
2,242,408	-		MPMX19_02143	0.21	+0.7
2,242,408	-		MPMX19_02143	0.21	-0.1
2,242,408	-		MPMX19_02143	0.21	+0.3
2,242,408	-		MPMX19_02143	0.21	+1.0
2,242,408	-		MPMX19_02143	0.21	-0.5
2,242,408	-		MPMX19_02143	0.21	-0.9
2,242,408	-		MPMX19_02143	0.21	+0.8
2,242,408	-		MPMX19_02143	0.21	-0.3
2,242,408	-		MPMX19_02143	0.21	+0.7
2,242,408	-		MPMX19_02143	0.21	+0.8
2,242,408	-		MPMX19_02143	0.21	-0.4
2,242,408	-		MPMX19_02143	0.21	-1.4
2,242,408	-		MPMX19_02143	0.21	+0.2
2,242,408	-		MPMX19_02143	0.21	+0.3
2,242,408	-		MPMX19_02143	0.21	-0.6
2,242,408	-		MPMX19_02143	0.21	+0.2
2,242,408	-		MPMX19_02143	0.21	+0.3
2,242,408	-		MPMX19_02143	0.21	+0.6
2,242,408	-		MPMX19_02143	0.21	-0.3
2,242,408	-		MPMX19_02143	0.21	-0.6
2,242,592	+		MPMX19_02143	0.82	+0.1
2,242,592	+		MPMX19_02143	0.82	-0.1
2,242,592	+		MPMX19_02143	0.82	-2.0
2,242,592	+		MPMX19_02143	0.82	+0.4
2,242,593	-		MPMX19_02143	0.82	+0.8
2,242,593	-		MPMX19_02143	0.82	-1.8
2,242,593	-		MPMX19_02143	0.82	-1.0
2,242,593	-		MPMX19_02143	0.82	-0.2
2,242,593	-		MPMX19_02143	0.82	+0.1
2,242,593	-		MPMX19_02143	0.82	+1.9
2,242,629	+				-2.0
2,242,629	+				+0.6
2,242,629	+				+0.1
2,242,630	-				+0.2
2,242,630	-				-0.4
2,242,630	-				-0.5
2,242,630	-				+1.2
2,242,630	-				+0.2
2,242,630	-				-0.9
2,242,630	-				+0.3
2,242,630	-				-0.0
2,242,630	-				-0.6
2,242,630	-				+1.6
2,242,630	-				+0.1
2,242,630	-				+0.6
2,242,684	+				+0.6
2,242,827	+		MPMX19_02144	0.27	+1.0
2,242,827	+		MPMX19_02144	0.27	+0.7
2,242,827	+		MPMX19_02144	0.27	-0.6
2,242,827	+		MPMX19_02144	0.27	-1.3
2,242,827	+		MPMX19_02144	0.27	-0.8
2,242,828	-		MPMX19_02144	0.28	-1.6
2,242,828	-		MPMX19_02144	0.28	-2.7
2,242,828	-		MPMX19_02144	0.28	-0.3
2,242,828	-		MPMX19_02144	0.28	+0.1
2,242,828	-		MPMX19_02144	0.28	+1.6
2,242,828	-		MPMX19_02144	0.28	+0.4
2,242,854	+		MPMX19_02144	0.36	-1.8
2,242,854	+		MPMX19_02144	0.36	-0.2
2,242,854	+		MPMX19_02144	0.36	+1.0
2,242,854	+		MPMX19_02144	0.36	+0.3
2,242,854	+		MPMX19_02144	0.36	+0.4
2,242,854	+		MPMX19_02144	0.36	+0.7
2,242,854	+		MPMX19_02144	0.36	-0.4
2,242,854	+		MPMX19_02144	0.36	-0.8
2,242,855	-		MPMX19_02144	0.36	-1.4
2,242,855	-		MPMX19_02144	0.36	+1.4
2,242,855	-		MPMX19_02144	0.36	-0.0
2,242,855	-		MPMX19_02144	0.36	-0.2
2,242,855	-		MPMX19_02144	0.36	-1.0
2,242,855	-		MPMX19_02144	0.36	-0.0
2,242,855	-		MPMX19_02144	0.36	-0.9
2,242,855	-		MPMX19_02144	0.36	+0.6
2,242,855	-		MPMX19_02144	0.36	+0.3
2,242,855	-		MPMX19_02144	0.36	-0.4
2,242,855	-		MPMX19_02144	0.36	-2.3
2,242,855	-		MPMX19_02144	0.36	-1.8
2,242,855	-		MPMX19_02144	0.36	-0.8
2,242,855	-		MPMX19_02144	0.36	-1.6
2,242,866	+		MPMX19_02144	0.40	-0.4
2,242,866	+		MPMX19_02144	0.40	-1.5
2,242,866	+		MPMX19_02144	0.40	-0.0
2,242,867	-		MPMX19_02144	0.40	-0.3