Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01913

Experiment: NL-CCM_agar

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM_agar
1,997,063	+		MPMX19_01912	0.45	+1.2
1,997,063	+		MPMX19_01912	0.45	-0.1
1,997,063	+		MPMX19_01912	0.45	-0.4
1,997,063	+		MPMX19_01912	0.45	-1.7
1,997,064	-		MPMX19_01912	0.45	-2.0
1,997,064	-		MPMX19_01912	0.45	-2.1
1,997,252	+		MPMX19_01912	0.61	+0.2
1,997,252	+		MPMX19_01912	0.61	-0.1
1,997,253	-		MPMX19_01912	0.61	+0.6
1,997,253	-		MPMX19_01912	0.61	+0.1
1,997,253	-		MPMX19_01912	0.61	-1.4
1,997,418	-		MPMX19_01912	0.75	+0.5
1,997,418	-		MPMX19_01912	0.75	-0.2
1,997,680	-				-0.2
1,997,729	+				-2.2
1,997,730	-				-0.3
1,997,730	-				-2.2
1,997,740	+				-1.0
1,997,740	+				-1.5
1,997,740	+				-0.5
1,997,740	+				-0.8
1,997,740	+				-1.1
1,997,740	+				-2.3
1,997,740	+				-0.0
1,997,741	-				-2.2
1,997,741	-				-1.0
1,997,741	-				-0.4
1,997,741	-				-2.8
1,997,743	+				-2.3
1,997,744	-				-0.6
1,997,745	+				-0.3
1,997,745	+				+1.0
1,997,745	+				+1.8
1,997,745	+				-0.5
1,997,745	+				-1.0
1,997,746	-				+0.1
1,997,775	+				-0.4
1,997,780	+				-1.4
1,997,780	+				-0.8
1,997,780	+				-0.9
1,997,780	+				-0.7
1,997,780	+				+2.8
1,997,781	-				-1.4
1,997,781	-				+0.6
1,997,781	-				-1.3
1,997,781	-				-0.1
1,997,781	-				+0.0
1,997,781	-				+0.9
1,997,781	-				-0.8
1,997,792	+				-1.2
1,997,792	+				-1.1
1,997,792	+				+0.1
1,997,792	+				-0.8
1,997,792	+				-1.3
1,997,792	+				-1.2
1,997,792	+				+0.4
1,997,792	+				+1.0
1,997,792	+				+1.2
1,997,792	+				-2.2
1,997,792	+				-0.7
1,997,792	+				+0.3
1,997,792	+				+0.0
1,997,792	+				+0.4
1,997,792	+				-0.6
1,997,792	+				-0.8
1,997,792	+				-0.5
1,997,792	+				-0.7
1,997,792	+				-0.7
1,997,793	-				+0.2
1,997,793	-				-0.7
1,997,793	-				-0.5
1,997,793	-				-0.5
1,997,793	-				-2.2
1,997,793	-				-1.0
1,997,793	-				+0.2
1,997,793	-				+0.1
1,997,793	-				+0.4
1,997,793	-				-0.1
1,997,793	-				-2.1
1,997,793	-				-0.7
1,997,793	-				-1.8
1,997,793	-				+0.8
1,997,793	-				-0.6
1,997,793	-				-1.0
1,997,898	-				-2.4
1,997,898	-				+0.0
1,997,904	-				+0.1
1,998,088	+		MPMX19_01913	0.20	+0.8
1,998,089	-		MPMX19_01913	0.20	-2.0
1,998,451	+		MPMX19_01913	0.47	+0.2
1,998,451	+		MPMX19_01913	0.47	-1.7
1,998,451	+		MPMX19_01913	0.47	-0.4
1,998,451	+		MPMX19_01913	0.47	+0.8
1,998,452	-		MPMX19_01913	0.47	-0.1
1,998,452	-		MPMX19_01913	0.47	-1.7
1,998,526	+		MPMX19_01913	0.53	-1.3
1,998,526	+		MPMX19_01913	0.53	+1.5
1,998,526	+		MPMX19_01913	0.53	-0.8
1,998,526	+		MPMX19_01913	0.53	-1.1
1,998,526	+		MPMX19_01913	0.53	-1.8
1,998,526	+		MPMX19_01913	0.53	+0.5
1,998,526	+		MPMX19_01913	0.53	-0.2
1,998,526	+		MPMX19_01913	0.53	-0.5
1,998,526	+		MPMX19_01913	0.53	-0.1
1,998,526	+		MPMX19_01913	0.53	-0.1
1,998,526	+		MPMX19_01913	0.53	-0.5
1,998,526	+		MPMX19_01913	0.53	-0.2
1,998,526	+		MPMX19_01913	0.53	-0.1
1,998,526	+		MPMX19_01913	0.53	-1.7
1,998,527	-		MPMX19_01913	0.53	+0.0
1,998,527	-		MPMX19_01913	0.53	+0.8
1,998,527	-		MPMX19_01913	0.53	-2.7
1,998,527	-		MPMX19_01913	0.53	-0.4
1,998,527	-		MPMX19_01913	0.53	-1.5
1,998,527	-		MPMX19_01913	0.53	-0.1
1,998,527	-		MPMX19_01913	0.53	+0.4
1,998,527	-		MPMX19_01913	0.53	-2.1
1,998,527	-		MPMX19_01913	0.53	-2.0
1,998,527	-		MPMX19_01913	0.53	-0.1
1,998,527	-		MPMX19_01913	0.53	-1.3
1,998,527	-		MPMX19_01913	0.53	-1.5
1,998,647	+		MPMX19_01913	0.62	-0.5
1,998,647	+		MPMX19_01913	0.62	-1.1
1,998,647	+		MPMX19_01913	0.62	-1.5
1,998,647	+		MPMX19_01913	0.62	-0.6
1,998,647	+		MPMX19_01913	0.62	+1.5
1,998,647	+		MPMX19_01913	0.62	+0.9
1,998,647	+		MPMX19_01913	0.62	-2.1
1,998,647	+		MPMX19_01913	0.62	-1.3
1,998,648	-		MPMX19_01913	0.62	-2.4
1,998,648	-		MPMX19_01913	0.62	-1.1
1,998,648	-		MPMX19_01913	0.62	-3.4
1,998,648	-		MPMX19_01913	0.62	+0.5
1,998,648	-		MPMX19_01913	0.62	-1.7
1,998,648	-		MPMX19_01913	0.62	-0.8
1,998,648	-		MPMX19_01913	0.62	+0.5
1,998,648	-		MPMX19_01913	0.62	-1.8
1,998,648	-		MPMX19_01913	0.62	+0.1
1,998,648	-		MPMX19_01913	0.62	-1.7
1,998,648	-		MPMX19_01913	0.62	-0.3
1,998,649	+		MPMX19_01913	0.62	-0.7
1,998,649	+		MPMX19_01913	0.62	-0.4
1,998,649	+		MPMX19_01913	0.62	+0.0
1,998,649	+		MPMX19_01913	0.62	-0.3
1,998,649	+		MPMX19_01913	0.62	+1.3
1,998,649	+		MPMX19_01913	0.62	-1.4
1,998,649	+		MPMX19_01913	0.62	-1.3
1,998,649	+		MPMX19_01913	0.62	-1.0
1,998,649	+		MPMX19_01913	0.62	-1.6
1,998,649	+		MPMX19_01913	0.62	-2.5
1,998,649	+		MPMX19_01913	0.62	-0.5
1,998,649	+		MPMX19_01913	0.62	-0.7
1,998,649	+		MPMX19_01913	0.62	-0.7
1,998,649	+		MPMX19_01913	0.62	-0.2
1,998,649	+		MPMX19_01913	0.62	+0.5
1,998,649	+		MPMX19_01913	0.62	+0.9
1,998,649	+		MPMX19_01913	0.62	-0.1
1,998,649	+		MPMX19_01913	0.62	-0.5
1,998,649	+		MPMX19_01913	0.62	+0.2
1,998,649	+		MPMX19_01913	0.62	-2.3
1,998,649	+		MPMX19_01913	0.62	-1.0
1,998,649	+		MPMX19_01913	0.62	-1.5
1,998,649	+		MPMX19_01913	0.62	-1.2
1,998,650	-		MPMX19_01913	0.62	+0.2
1,998,650	-		MPMX19_01913	0.62	+1.0
1,998,650	-		MPMX19_01913	0.62	-2.3
1,998,650	-		MPMX19_01913	0.62	-1.2
1,998,650	-		MPMX19_01913	0.62	-0.8
1,998,650	-		MPMX19_01913	0.62	-2.1
1,998,650	-		MPMX19_01913	0.62	-3.2
1,998,650	-		MPMX19_01913	0.62	-2.1
1,998,650	-		MPMX19_01913	0.62	-1.3
1,998,650	-		MPMX19_01913	0.62	-1.8
1,998,650	-		MPMX19_01913	0.62	-1.6
1,998,650	-		MPMX19_01913	0.62	-0.3
1,998,650	-		MPMX19_01913	0.62	-1.2
1,998,650	-		MPMX19_01913	0.62	+0.6
1,998,709	+		MPMX19_01913	0.66	+0.7
1,998,709	+		MPMX19_01913	0.66	-1.2
1,998,710	-		MPMX19_01913	0.67	-2.7
1,998,710	-		MPMX19_01913	0.67	+0.1
1,998,710	-		MPMX19_01913	0.67	-2.1
1,999,379	+				-1.5
1,999,379	+				-0.7
1,999,380	-				-0.7
1,999,400	+				-0.2
1,999,400	+				+0.1
1,999,400	+				-0.6
1,999,401	-				-1.5
1,999,401	-				-1.0
1,999,470	+				-2.0
1,999,470	+				-2.4
1,999,470	+				-0.1
1,999,470	+				+1.1
1,999,470	+				-1.3
1,999,470	+				+0.3
1,999,470	+				+0.1
1,999,471	-				-1.1
1,999,471	-				-0.5
1,999,471	-				-0.7
1,999,471	-				-0.2
1,999,471	-				+0.5
1,999,471	-				-1.0
1,999,471	-				-0.7
1,999,471	-				-0.5
1,999,471	-				-1.8
1,999,471	-				+0.7
1,999,471	-				-1.5
1,999,471	-				-1.9
1,999,471	-				-0.6
1,999,471	-				-0.7
1,999,472	+				+1.2
1,999,472	+				-1.8
1,999,472	+				-0.1
1,999,472	+				-0.4
1,999,473	-				+1.1
1,999,473	-				+0.5
1,999,473	-				-0.4
1,999,473	-				-0.1
1,999,473	-				-0.7
1,999,473	-				+0.2
1,999,473	-				-0.8
1,999,514	+				-0.6
1,999,514	+				-1.0
1,999,514	+				-1.5
1,999,514	+				+1.5
1,999,514	+				+0.0
1,999,514	+				-1.3
1,999,514	+				-2.1
1,999,514	+				-0.7
1,999,515	-				+0.2
1,999,515	-				-1.0
1,999,515	-				+1.3
1,999,515	-				+0.6
1,999,515	-				-0.3
1,999,515	-				-0.1
1,999,515	-				+0.2
1,999,515	-				-0.7
1,999,515	-				-0.5
1,999,515	-				+0.7
1,999,515	-				+0.7
1,999,515	-				+0.2
1,999,515	-				-1.5
1,999,601	+				-0.2
1,999,602	-				-0.9
1,999,602	-				+0.4
1,999,602	-				+0.6
1,999,631	+				-0.5
1,999,643	+				-0.8
1,999,643	+				-1.1
1,999,644	-				-1.1
1,999,644	-				-0.3
1,999,649	+				+0.4
1,999,649	+				+0.5
1,999,649	+				-0.1
1,999,650	-				-1.1
1,999,650	-				+0.3
1,999,794	+				-2.2
1,999,794	+				-0.7
1,999,794	+				+0.1
1,999,794	+				+0.7
1,999,795	-				-0.6
1,999,795	-				-0.2
1,999,795	-				-0.7
1,999,795	-				-0.5
1,999,795	-				-1.1
1,999,812	+		MPMX19_01914	0.10	+0.4
1,999,812	+		MPMX19_01914	0.10	-0.1
1,999,812	+		MPMX19_01914	0.10	-0.0
1,999,812	+		MPMX19_01914	0.10	-0.7
1,999,812	+		MPMX19_01914	0.10	-1.7
1,999,812	+		MPMX19_01914	0.10	-0.8
1,999,812	+		MPMX19_01914	0.10	-0.3
1,999,812	+		MPMX19_01914	0.10	-0.2
1,999,812	+		MPMX19_01914	0.10	-0.7
1,999,812	+		MPMX19_01914	0.10	+0.1
1,999,812	+		MPMX19_01914	0.10	-0.1
1,999,813	-		MPMX19_01914	0.10	-2.0
1,999,813	-		MPMX19_01914	0.10	+1.7
1,999,813	-		MPMX19_01914	0.10	+0.1
1,999,818	-		MPMX19_01914	0.11	-0.8
1,999,833	+		MPMX19_01914	0.13	-0.3
1,999,833	+		MPMX19_01914	0.13	+0.4
1,999,833	+		MPMX19_01914	0.13	-0.1
1,999,833	+		MPMX19_01914	0.13	+0.0
1,999,833	+		MPMX19_01914	0.13	-0.7
1,999,833	+		MPMX19_01914	0.13	-0.6
1,999,833	+		MPMX19_01914	0.13	-1.4
1,999,833	+		MPMX19_01914	0.13	-0.3
1,999,833	+		MPMX19_01914	0.13	-1.7
1,999,833	+		MPMX19_01914	0.13	+0.7
1,999,833	+		MPMX19_01914	0.13	-0.9
1,999,833	+		MPMX19_01914	0.13	-0.7
1,999,834	-		MPMX19_01914	0.14	+0.1
1,999,834	-		MPMX19_01914	0.14	+0.3
1,999,834	-		MPMX19_01914	0.14	-1.9
1,999,834	-		MPMX19_01914	0.14	-0.6
1,999,834	-		MPMX19_01914	0.14	-0.3
1,999,834	-		MPMX19_01914	0.14	-0.5
1,999,834	-		MPMX19_01914	0.14	+0.1
1,999,834	-		MPMX19_01914	0.14	-0.7
1,999,834	-		MPMX19_01914	0.14	+1.5
1,999,834	-		MPMX19_01914	0.14	-0.1
1,999,834	-		MPMX19_01914	0.14	+0.6
1,999,834	-		MPMX19_01914	0.14	+0.1
1,999,834	-		MPMX19_01914	0.14	-1.0
1,999,834	-		MPMX19_01914	0.14	-0.1
1,999,834	-		MPMX19_01914	0.14	-1.9
1,999,834	-		MPMX19_01914	0.14	-2.9
1,999,834	-		MPMX19_01914	0.14	-0.2
1,999,834	-		MPMX19_01914	0.14	+0.2
1,999,834	-		MPMX19_01914	0.14	-1.0
1,999,834	-		MPMX19_01914	0.14	+0.2
1,999,890	+		MPMX19_01914	0.22	-0.0
1,999,890	+		MPMX19_01914	0.22	-0.1
1,999,890	+		MPMX19_01914	0.22	-1.4
1,999,890	+		MPMX19_01914	0.22	-0.2
1,999,890	+		MPMX19_01914	0.22	+0.4
1,999,890	+		MPMX19_01914	0.22	-0.7
1,999,890	+		MPMX19_01914	0.22	+0.5
1,999,890	+		MPMX19_01914	0.22	+0.2
1,999,890	+		MPMX19_01914	0.22	+0.8
1,999,891	-		MPMX19_01914	0.22	-1.2
1,999,891	-		MPMX19_01914	0.22	-0.3
1,999,891	-		MPMX19_01914	0.22	+0.3
1,999,891	-		MPMX19_01914	0.22	-0.5
1,999,891	-		MPMX19_01914	0.22	+0.6
1,999,891	-		MPMX19_01914	0.22	+0.0
1,999,891	-		MPMX19_01914	0.22	-0.2
1,999,891	-		MPMX19_01914	0.22	-2.0
1,999,891	-		MPMX19_01914	0.22	+0.9
1,999,891	-		MPMX19_01914	0.22	-1.1
2,000,010	+		MPMX19_01914	0.41	+0.8
2,000,010	+		MPMX19_01914	0.41	+0.4
2,000,010	+		MPMX19_01914	0.41	-1.1
2,000,011	-		MPMX19_01914	0.41	-1.0
2,000,011	-		MPMX19_01914	0.41	+0.2
2,000,011	-		MPMX19_01914	0.41	+0.0
2,000,011	-		MPMX19_01914	0.41	-0.9
2,000,052	+		MPMX19_01914	0.47	+0.4
2,000,052	+		MPMX19_01914	0.47	+0.8
2,000,053	-		MPMX19_01914	0.47	-0.8
2,000,097	+		MPMX19_01914	0.54	+0.0
2,000,097	+		MPMX19_01914	0.54	-0.8
2,000,097	+		MPMX19_01914	0.54	-0.8
2,000,097	+		MPMX19_01914	0.54	-0.9
2,000,098	-		MPMX19_01914	0.54	+0.4
2,000,098	-		MPMX19_01914	0.54	+0.7
2,000,098	-		MPMX19_01914	0.54	+0.5
2,000,098	-		MPMX19_01914	0.54	+0.8