Experiment: NL-CCM_agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00492 and MPMX19_00493 are separated by 34 nucleotides MPMX19_00493 and MPMX19_00494 are separated by 121 nucleotides MPMX19_00494 and MPMX19_00495 are separated by 96 nucleotides
MPMX19_00492: MPMX19_00492 - Cobalamin biosynthesis protein CbiB, at 492,604 to 493,587
_00492
MPMX19_00493: MPMX19_00493 - hypothetical protein, at 493,622 to 494,197
_00493
MPMX19_00494: MPMX19_00494 - hypothetical protein, at 494,319 to 494,462
_00494
MPMX19_00495: MPMX19_00495 - hypothetical protein, at 494,559 to 495,191
_00495
Position (kb) 493
494
495 Strain fitness (log2 ratio) -1
0
1 at 493.076 kb on + strand, within MPMX19_00492 at 493.077 kb on - strand, within MPMX19_00492 at 493.077 kb on - strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.166 kb on + strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.167 kb on - strand, within MPMX19_00492 at 493.655 kb on + strand at 493.656 kb on - strand at 493.656 kb on - strand at 493.656 kb on - strand at 493.656 kb on - strand at 493.656 kb on - strand at 493.656 kb on - strand at 493.656 kb on - strand at 493.656 kb on - strand at 494.233 kb on + strand at 494.233 kb on + strand at 494.236 kb on + strand at 494.236 kb on + strand at 494.236 kb on + strand at 494.236 kb on + strand at 494.236 kb on + strand at 494.237 kb on - strand at 494.838 kb on + strand, within MPMX19_00495 at 494.838 kb on + strand, within MPMX19_00495 at 494.838 kb on + strand, within MPMX19_00495 at 494.838 kb on + strand, within MPMX19_00495 at 494.838 kb on + strand, within MPMX19_00495 at 494.839 kb on - strand, within MPMX19_00495 at 494.839 kb on - strand, within MPMX19_00495 at 494.839 kb on - strand, within MPMX19_00495 at 494.839 kb on - strand, within MPMX19_00495 at 494.839 kb on - strand, within MPMX19_00495 at 494.839 kb on - strand, within MPMX19_00495 at 494.839 kb on - strand, within MPMX19_00495 at 494.839 kb on - strand, within MPMX19_00495 at 494.839 kb on - strand, within MPMX19_00495 at 494.895 kb on + strand, within MPMX19_00495 at 494.895 kb on + strand, within MPMX19_00495 at 494.895 kb on + strand, within MPMX19_00495 at 494.895 kb on + strand, within MPMX19_00495 at 494.895 kb on + strand, within MPMX19_00495 at 494.895 kb on + strand, within MPMX19_00495 at 494.895 kb on + strand, within MPMX19_00495 at 494.895 kb on + strand, within MPMX19_00495 at 494.896 kb on - strand, within MPMX19_00495 at 494.896 kb on - strand, within MPMX19_00495 at 494.896 kb on - strand, within MPMX19_00495 at 494.896 kb on - strand, within MPMX19_00495 at 494.896 kb on - strand, within MPMX19_00495 at 494.896 kb on - strand, within MPMX19_00495
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM_agar remove 493,076 + MPMX19_00492 0.48 -0.8 493,077 - MPMX19_00492 0.48 -0.1 493,077 - MPMX19_00492 0.48 +0.1 493,166 + MPMX19_00492 0.57 +1.2 493,166 + MPMX19_00492 0.57 +0.3 493,166 + MPMX19_00492 0.57 +1.3 493,166 + MPMX19_00492 0.57 +0.7 493,166 + MPMX19_00492 0.57 -0.2 493,166 + MPMX19_00492 0.57 -0.3 493,166 + MPMX19_00492 0.57 +0.2 493,167 - MPMX19_00492 0.57 -0.7 493,167 - MPMX19_00492 0.57 +1.2 493,167 - MPMX19_00492 0.57 +0.8 493,167 - MPMX19_00492 0.57 +0.6 493,167 - MPMX19_00492 0.57 +0.9 493,167 - MPMX19_00492 0.57 -0.8 493,655 + -0.4 493,656 - -0.5 493,656 - +0.1 493,656 - -0.2 493,656 - +0.3 493,656 - +0.5 493,656 - -0.0 493,656 - +0.8 493,656 - -0.1 494,233 + -0.1 494,233 + +1.1 494,236 + -1.2 494,236 + +0.0 494,236 + -1.3 494,236 + +0.2 494,236 + +0.3 494,237 - -0.7 494,838 + MPMX19_00495 0.44 -1.1 494,838 + MPMX19_00495 0.44 -0.2 494,838 + MPMX19_00495 0.44 -1.1 494,838 + MPMX19_00495 0.44 +0.4 494,838 + MPMX19_00495 0.44 +0.1 494,839 - MPMX19_00495 0.44 -0.5 494,839 - MPMX19_00495 0.44 -0.7 494,839 - MPMX19_00495 0.44 -0.2 494,839 - MPMX19_00495 0.44 +0.5 494,839 - MPMX19_00495 0.44 -0.8 494,839 - MPMX19_00495 0.44 +0.2 494,839 - MPMX19_00495 0.44 -0.5 494,839 - MPMX19_00495 0.44 -0.5 494,839 - MPMX19_00495 0.44 +0.0 494,895 + MPMX19_00495 0.53 +0.0 494,895 + MPMX19_00495 0.53 -1.1 494,895 + MPMX19_00495 0.53 -0.9 494,895 + MPMX19_00495 0.53 +0.8 494,895 + MPMX19_00495 0.53 -0.5 494,895 + MPMX19_00495 0.53 +0.1 494,895 + MPMX19_00495 0.53 -0.5 494,895 + MPMX19_00495 0.53 -0.8 494,896 - MPMX19_00495 0.53 +0.3 494,896 - MPMX19_00495 0.53 -1.7 494,896 - MPMX19_00495 0.53 +0.1 494,896 - MPMX19_00495 0.53 +0.8 494,896 - MPMX19_00495 0.53 -0.5 494,896 - MPMX19_00495 0.53 -1.6
Or see this region's nucleotide sequence