Strain Fitness in Methylophilus sp. DMC18 around GFF771

Experiment: D-Glucose and Methanol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose and Methanol (C)
7,829	+		GFF768	0.54	-1.9
7,829	+		GFF768	0.54	-0.8
7,829	+		GFF768	0.54	+0.5
7,854	+		GFF768	0.60	-0.4
7,854	+		GFF768	0.60	-0.8
7,855	-		GFF768	0.61	-1.0
7,855	-		GFF768	0.61	-0.8
7,855	-		GFF768	0.61	-0.7
7,855	-		GFF768	0.61	+0.6
7,855	-		GFF768	0.61	-0.9
7,856	+		GFF768	0.61	-0.2
7,856	+		GFF768	0.61	-0.2
7,856	+		GFF768	0.61	-0.0
7,857	-		GFF768	0.61	-1.4
7,857	-		GFF768	0.61	-0.1
7,962	+		GFF768	0.87	-1.1
7,964	+		GFF768	0.87	-0.5
7,998	+				+0.5
8,027	+				-0.1
8,092	+		GFF769	0.33	-0.4
8,092	+		GFF769	0.33	-1.1
8,092	+		GFF769	0.33	-0.9
8,092	+		GFF769	0.33	-0.3
8,093	-		GFF769	0.33	+0.6
8,093	-		GFF769	0.33	+0.2
8,093	-		GFF769	0.33	-1.5
8,093	-		GFF769	0.33	-0.3
8,094	+		GFF769	0.34	-0.1
8,095	-		GFF769	0.34	-1.4
8,095	-		GFF769	0.34	+0.1
8,095	-		GFF769	0.34	-0.1
8,117	+		GFF769	0.43	-1.0
8,117	+		GFF769	0.43	-0.5
8,117	+		GFF769	0.43	+0.6
8,117	+		GFF769	0.43	-0.7
8,118	-		GFF769	0.43	-0.7
8,118	-		GFF769	0.43	-0.7
8,118	-		GFF769	0.43	-1.7
8,126	+		GFF769	0.46	-1.1
8,127	-		GFF769	0.47	+0.3
8,127	-		GFF769	0.47	-1.5
8,133	+		GFF769	0.49	-0.4
8,134	-		GFF769	0.49	-1.1
8,138	+		GFF769	0.51	-2.1
8,138	+		GFF769	0.51	+0.4
8,138	+		GFF769	0.51	+0.2
8,157	+		GFF769	0.58	-0.5
8,157	+		GFF769	0.58	-1.2
8,157	+		GFF769	0.58	+0.4
8,164	+		GFF769	0.61	-1.9
8,170	+		GFF769	0.64	-2.2
8,170	+		GFF769	0.64	-0.2
8,170	+		GFF769	0.64	+0.5
8,170	+		GFF769	0.64	-1.2
8,170	+		GFF769	0.64	+0.3
8,171	-		GFF769	0.64	-0.1
8,171	-		GFF769	0.64	-0.4
8,171	-		GFF769	0.64	-1.4
8,267	+				-0.2
8,267	+				-0.3
8,267	+				-0.7
8,267	+				-0.9
8,267	+				-1.7
8,267	+				+0.5
8,268	-				-1.0
8,268	-				-0.7
8,268	-				-0.8
8,268	-				-3.2
8,271	+				+0.9
8,271	+				-0.5
8,271	+				-2.2
8,271	+				+0.7
8,271	+				-0.5
8,272	-				-1.8
8,272	-				-0.7
8,272	-				-0.7
8,272	-				+0.1
8,332	+		GFF770	0.28	-0.2
8,332	+		GFF770	0.28	+0.0
8,332	+		GFF770	0.28	-0.3
8,363	+		GFF770	0.42	-0.8
8,363	+		GFF770	0.42	-1.3
8,364	-		GFF770	0.42	-0.2
8,364	-		GFF770	0.42	+0.0
8,497	+				-0.4
8,497	+				+1.1
8,497	+				+0.3
8,497	+				-0.1
8,498	-				-2.4
8,498	-				-1.1
8,498	-				-0.8
8,498	-				-1.1
8,498	-				-0.1
8,498	-				-1.1
8,500	+				+0.7
8,500	+				+0.9
8,500	+				-1.7
8,501	-				-1.1
8,501	-				-1.1
8,529	-				-1.2
8,547	-				-2.0
8,702	+				+0.2
8,702	+				-0.4
8,703	-				-2.6
8,704	+				+1.2
8,795	+				+1.2
8,795	+				-0.2
8,796	-				-1.2
8,796	-				-0.7
8,796	-				-1.9
8,796	-				+0.2
8,846	+				-1.1
8,875	-				-1.0
8,875	-				-1.1
9,005	+				-0.1
9,005	+				-2.2
9,005	+				-1.4
9,005	+				-0.9
9,045	+				-0.7
9,045	+				-2.1
9,059	+				-0.4
9,059	+				-1.3
9,059	+				-0.3
9,059	+				-3.1
9,059	+				-0.1
9,059	+				-0.7
9,073	+				-1.1
9,073	+				-0.8
9,074	-				-0.1
9,074	-				-0.8
9,074	-				-1.2
9,141	+		GFF771	0.12	-1.4
9,141	+		GFF771	0.12	-0.4
9,141	+		GFF771	0.12	-0.5
9,142	-		GFF771	0.12	+0.1
9,279	+		GFF771	0.17	-0.4
9,421	+		GFF771	0.22	-1.2
9,421	+		GFF771	0.22	+1.6
9,466	+		GFF771	0.23	-0.6
9,466	+		GFF771	0.23	-1.2
9,477	+		GFF771	0.24	-1.4
9,477	+		GFF771	0.24	+0.0
9,477	+		GFF771	0.24	-1.4
9,478	-		GFF771	0.24	-0.1
9,478	-		GFF771	0.24	-1.7
9,478	-		GFF771	0.24	-1.7
9,485	+		GFF771	0.24	+0.2
9,485	+		GFF771	0.24	-0.7
9,485	+		GFF771	0.24	-1.2
9,485	+		GFF771	0.24	-1.4
9,485	+		GFF771	0.24	-0.1
9,485	+		GFF771	0.24	-0.9
9,486	-		GFF771	0.24	-0.1
9,486	-		GFF771	0.24	-0.4
9,486	-		GFF771	0.24	-1.0
9,486	-		GFF771	0.24	+0.1
9,486	-		GFF771	0.24	-1.1
9,486	-		GFF771	0.24	-1.5
9,486	-		GFF771	0.24	+0.5
9,561	+		GFF771	0.27	+0.2
9,561	+		GFF771	0.27	-1.1
9,577	-		GFF771	0.27	-0.0
9,577	-		GFF771	0.27	-0.4
9,673	+		GFF771	0.31	-1.1
9,674	-		GFF771	0.31	+0.2
9,861	-		GFF771	0.38	-0.3
10,100	+		GFF771	0.46	-1.4
10,100	+		GFF771	0.46	+1.5
10,100	+		GFF771	0.46	-0.0
10,100	+		GFF771	0.46	-1.4
10,101	-		GFF771	0.46	-0.2
10,101	-		GFF771	0.46	+0.5
10,101	-		GFF771	0.46	-1.2
10,101	-		GFF771	0.46	-1.7
10,101	-		GFF771	0.46	-2.4
10,115	-		GFF771	0.47	-0.3
10,214	-		GFF771	0.50	-1.0
10,300	+		GFF771	0.53	+0.3
10,300	+		GFF771	0.53	-0.9
10,300	+		GFF771	0.53	-1.3
10,300	+		GFF771	0.53	+0.9
10,301	-		GFF771	0.53	-0.7
10,301	-		GFF771	0.53	-1.4
10,302	+		GFF771	0.53	+0.5
10,303	-		GFF771	0.54	-2.2
10,303	-		GFF771	0.54	-1.1
10,305	+		GFF771	0.54	-1.9
10,305	+		GFF771	0.54	-0.1
10,306	-		GFF771	0.54	-0.1
10,597	+		GFF771	0.64	-1.9
10,597	+		GFF771	0.64	-1.1
10,597	+		GFF771	0.64	-0.7
10,597	+		GFF771	0.64	-1.5
10,597	+		GFF771	0.64	-0.1
10,598	-		GFF771	0.64	-1.5
10,598	-		GFF771	0.64	-1.9
10,598	-		GFF771	0.64	-1.1
10,598	-		GFF771	0.64	-0.2
10,598	-		GFF771	0.64	-0.2
10,598	-		GFF771	0.64	+0.2
10,600	-		GFF771	0.64	-1.7
10,600	-		GFF771	0.64	-0.7
10,630	-		GFF771	0.65	-1.7
10,702	+		GFF771	0.68	+0.9
10,703	-		GFF771	0.68	-0.8
10,940	-		GFF771	0.76	-0.1
10,955	-		GFF771	0.77	+0.6
11,073	-		GFF771	0.81	-1.6
11,236	-		GFF771	0.87	-1.1
11,236	-		GFF771	0.87	-0.8
11,236	-		GFF771	0.87	-0.7
11,248	-		GFF771	0.87	-1.7
11,248	-		GFF771	0.87	-0.5
11,260	-		GFF771	0.88	-0.9
11,299	+		GFF771	0.89	-1.2
11,300	-		GFF771	0.89	+0.2
11,489	+				+0.2
11,490	-				-0.1
11,490	-				-0.8
11,498	+				+0.2
11,498	+				-0.5
11,499	-				+0.5
11,499	-				+0.2
11,571	+				-0.7
11,586	+				-1.2
11,594	-				+0.2
11,669	+				-0.1
11,669	+				-0.0
11,684	+				-0.1
11,684	+				-1.1
11,684	+				-0.1
11,685	-				-0.3
11,685	-				-0.8
11,685	-				-0.6
11,686	+				-1.6
11,686	+				-2.2
11,687	-				-1.1
11,687	-				-0.9
11,694	+				-0.1
11,695	-				-1.2
11,695	-				-1.0
11,695	-				-1.5
11,695	-				-0.1
11,695	-				-1.1
11,695	-				+0.5
11,695	-				+1.6
11,717	-				-0.4
11,880	-		GFF772	0.81	-3.0
11,930	+				-1.1
11,931	-				-1.5
11,936	+				+0.2
11,936	+				-1.7
11,937	-				-0.3
11,937	-				+0.0
11,937	-				-1.1
11,937	-				+0.9
11,937	-				+0.2
11,937	-				-0.4
11,950	-				-0.2
11,971	+				-0.1
11,971	+				-0.1
11,971	+				-0.1
11,971	+				-1.2
11,971	+				-1.9
11,972	-				-0.5
11,972	-				-1.2
11,972	-				-0.5
11,972	-				+0.0
11,972	-				-0.7