Experiment: D-Glucose and Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF671 and GFF672 are separated by 107 nucleotides GFF672 and GFF673 are separated by 177 nucleotides GFF673 and GFF674 are separated by 67 nucleotides
GFF671 - PqqA peptide cyclase, at 746,516 to 747,697
GFF671
GFF672 - Bicyclomycin resistance protein, at 747,805 to 748,962
GFF672
GFF673 - hypothetical protein, at 749,140 to 749,832
GFF673
GFF674 - Phosphoenolpyruvate synthase regulatory protein, at 749,900 to 750,703
GFF674
Position (kb) 747
748
749 Strain fitness (log2 ratio) -2
-1
0
1 at 746.812 kb on + strand, within GFF671 at 746.875 kb on + strand, within GFF671 at 747.213 kb on + strand, within GFF671 at 747.233 kb on + strand, within GFF671 at 747.309 kb on + strand, within GFF671 at 747.600 kb on + strand at 747.647 kb on + strand at 747.648 kb on - strand at 747.651 kb on + strand at 747.651 kb on + strand at 747.652 kb on - strand at 747.652 kb on - strand at 747.670 kb on + strand at 747.670 kb on + strand at 747.670 kb on + strand at 747.670 kb on + strand at 747.715 kb on + strand at 747.715 kb on + strand at 747.715 kb on + strand at 747.715 kb on + strand at 747.715 kb on + strand at 747.715 kb on + strand at 747.716 kb on - strand at 747.762 kb on + strand at 747.762 kb on + strand at 747.762 kb on + strand at 747.841 kb on + strand at 747.841 kb on + strand at 747.841 kb on + strand at 747.914 kb on + strand at 747.914 kb on + strand at 747.914 kb on + strand at 747.914 kb on + strand at 747.914 kb on + strand at 747.914 kb on + strand at 747.914 kb on + strand at 747.914 kb on + strand at 747.915 kb on - strand at 747.915 kb on - strand at 747.915 kb on - strand at 747.916 kb on + strand at 747.916 kb on + strand at 747.916 kb on + strand at 747.916 kb on + strand at 747.916 kb on + strand at 747.916 kb on + strand at 747.916 kb on + strand at 747.917 kb on - strand at 747.917 kb on - strand at 747.917 kb on - strand at 747.928 kb on + strand, within GFF672 at 747.928 kb on + strand, within GFF672 at 747.928 kb on + strand, within GFF672 at 747.929 kb on - strand, within GFF672 at 747.929 kb on - strand, within GFF672 at 747.944 kb on + strand, within GFF672 at 747.944 kb on + strand, within GFF672 at 747.944 kb on + strand, within GFF672 at 747.944 kb on + strand, within GFF672 at 747.945 kb on - strand, within GFF672 at 747.981 kb on + strand, within GFF672 at 748.173 kb on - strand, within GFF672 at 748.223 kb on + strand, within GFF672 at 748.268 kb on + strand, within GFF672 at 748.268 kb on + strand, within GFF672 at 748.268 kb on + strand, within GFF672 at 748.269 kb on - strand, within GFF672 at 748.270 kb on + strand, within GFF672 at 748.270 kb on + strand, within GFF672 at 748.270 kb on + strand, within GFF672 at 748.270 kb on + strand, within GFF672 at 748.270 kb on + strand, within GFF672 at 748.369 kb on + strand, within GFF672 at 748.383 kb on + strand, within GFF672 at 748.384 kb on - strand, within GFF672 at 748.384 kb on - strand, within GFF672 at 748.447 kb on + strand, within GFF672 at 748.447 kb on + strand, within GFF672 at 748.447 kb on + strand, within GFF672 at 748.447 kb on + strand, within GFF672 at 748.448 kb on - strand, within GFF672 at 748.494 kb on + strand, within GFF672 at 748.566 kb on + strand, within GFF672 at 748.566 kb on + strand, within GFF672 at 748.567 kb on - strand, within GFF672 at 748.567 kb on - strand, within GFF672 at 748.634 kb on + strand, within GFF672 at 748.634 kb on + strand, within GFF672 at 748.634 kb on + strand, within GFF672 at 748.691 kb on + strand, within GFF672 at 748.712 kb on + strand, within GFF672 at 748.713 kb on - strand, within GFF672 at 748.713 kb on - strand, within GFF672 at 748.812 kb on + strand, within GFF672 at 748.830 kb on + strand, within GFF672 at 748.941 kb on + strand at 748.992 kb on + strand at 748.992 kb on + strand at 748.992 kb on + strand at 748.993 kb on - strand at 749.014 kb on + strand at 749.024 kb on + strand at 749.027 kb on - strand at 749.058 kb on + strand at 749.080 kb on + strand at 749.080 kb on + strand at 749.080 kb on + strand at 749.080 kb on + strand at 749.101 kb on + strand at 749.102 kb on - strand at 749.116 kb on - strand at 749.125 kb on + strand at 749.125 kb on + strand at 749.125 kb on + strand at 749.139 kb on + strand at 749.139 kb on + strand at 749.176 kb on + strand at 749.177 kb on - strand at 749.177 kb on - strand at 749.268 kb on + strand, within GFF673 at 749.283 kb on + strand, within GFF673 at 749.303 kb on + strand, within GFF673 at 749.486 kb on - strand, within GFF673 at 749.531 kb on + strand, within GFF673 at 749.531 kb on + strand, within GFF673 at 749.531 kb on + strand, within GFF673 at 749.531 kb on + strand, within GFF673 at 749.531 kb on + strand, within GFF673 at 749.532 kb on - strand, within GFF673 at 749.532 kb on - strand, within GFF673 at 749.532 kb on - strand, within GFF673 at 749.532 kb on - strand, within GFF673 at 749.552 kb on + strand, within GFF673 at 749.553 kb on - strand, within GFF673 at 749.615 kb on + strand, within GFF673 at 749.638 kb on + strand, within GFF673 at 749.638 kb on + strand, within GFF673 at 749.639 kb on - strand, within GFF673 at 749.639 kb on - strand, within GFF673 at 749.639 kb on - strand, within GFF673 at 749.656 kb on + strand, within GFF673 at 749.657 kb on - strand, within GFF673 at 749.712 kb on + strand, within GFF673 at 749.712 kb on + strand, within GFF673 at 749.713 kb on - strand, within GFF673 at 749.713 kb on - strand, within GFF673 at 749.760 kb on + strand, within GFF673 at 749.760 kb on + strand, within GFF673 at 749.761 kb on - strand, within GFF673 at 749.761 kb on - strand, within GFF673 at 749.796 kb on + strand at 749.796 kb on + strand at 749.796 kb on + strand at 749.796 kb on + strand at 749.830 kb on + strand at 749.830 kb on + strand at 749.830 kb on + strand at 749.830 kb on + strand at 749.831 kb on - strand at 749.846 kb on + strand at 749.847 kb on - strand at 749.868 kb on + strand at 749.881 kb on + strand at 749.901 kb on + strand at 749.902 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and Methanol (C) remove 746,812 + GFF671 0.25 +0.5 746,875 + GFF671 0.30 -0.5 747,213 + GFF671 0.59 -0.1 747,233 + GFF671 0.61 -0.4 747,309 + GFF671 0.67 -0.7 747,600 + -0.7 747,647 + -0.7 747,648 - -0.7 747,651 + -2.5 747,651 + -0.9 747,652 - -1.7 747,652 - -1.7 747,670 + +0.9 747,670 + -0.5 747,670 + -0.7 747,670 + +0.0 747,715 + -1.8 747,715 + -0.6 747,715 + +0.3 747,715 + +0.6 747,715 + -1.1 747,715 + -1.1 747,716 - -1.5 747,762 + -0.7 747,762 + +0.1 747,762 + +0.1 747,841 + -2.4 747,841 + -1.1 747,841 + -0.7 747,914 + -1.8 747,914 + -0.3 747,914 + -0.7 747,914 + -0.5 747,914 + -0.5 747,914 + -0.8 747,914 + +0.0 747,914 + -0.1 747,915 - -1.1 747,915 - +0.1 747,915 - -1.5 747,916 + +0.4 747,916 + +0.6 747,916 + +0.4 747,916 + -0.8 747,916 + +0.5 747,916 + -1.2 747,916 + -1.0 747,917 - -1.1 747,917 - -1.9 747,917 - -0.5 747,928 + GFF672 0.11 +0.4 747,928 + GFF672 0.11 +0.5 747,928 + GFF672 0.11 -1.2 747,929 - GFF672 0.11 -0.5 747,929 - GFF672 0.11 -2.6 747,944 + GFF672 0.12 +0.1 747,944 + GFF672 0.12 -0.7 747,944 + GFF672 0.12 -0.6 747,944 + GFF672 0.12 -0.4 747,945 - GFF672 0.12 -0.1 747,981 + GFF672 0.15 +0.6 748,173 - GFF672 0.32 +0.3 748,223 + GFF672 0.36 +0.1 748,268 + GFF672 0.40 -0.6 748,268 + GFF672 0.40 -0.5 748,268 + GFF672 0.40 -0.9 748,269 - GFF672 0.40 -0.1 748,270 + GFF672 0.40 -2.3 748,270 + GFF672 0.40 -0.5 748,270 + GFF672 0.40 -0.8 748,270 + GFF672 0.40 +0.1 748,270 + GFF672 0.40 -0.6 748,369 + GFF672 0.49 -0.5 748,383 + GFF672 0.50 -0.5 748,384 - GFF672 0.50 +0.1 748,384 - GFF672 0.50 -1.1 748,447 + GFF672 0.55 +0.5 748,447 + GFF672 0.55 -0.2 748,447 + GFF672 0.55 -0.7 748,447 + GFF672 0.55 -0.1 748,448 - GFF672 0.56 -2.1 748,494 + GFF672 0.59 -0.3 748,566 + GFF672 0.66 -1.1 748,566 + GFF672 0.66 -1.1 748,567 - GFF672 0.66 +0.5 748,567 - GFF672 0.66 -0.9 748,634 + GFF672 0.72 +0.4 748,634 + GFF672 0.72 -0.4 748,634 + GFF672 0.72 -0.3 748,691 + GFF672 0.77 -0.6 748,712 + GFF672 0.78 +0.5 748,713 - GFF672 0.78 -1.1 748,713 - GFF672 0.78 -1.1 748,812 + GFF672 0.87 +0.5 748,830 + GFF672 0.89 -0.6 748,941 + -1.1 748,992 + -0.9 748,992 + -0.1 748,992 + -1.1 748,993 - -1.1 749,014 + -1.1 749,024 + -0.9 749,027 - +0.2 749,058 + +0.1 749,080 + -0.7 749,080 + -0.7 749,080 + -1.0 749,080 + -0.6 749,101 + -0.8 749,102 - +1.4 749,116 - -1.1 749,125 + -0.1 749,125 + +0.9 749,125 + -0.4 749,139 + -0.2 749,139 + -0.8 749,176 + -0.8 749,177 - -2.3 749,177 - -2.3 749,268 + GFF673 0.18 -0.8 749,283 + GFF673 0.21 +0.5 749,303 + GFF673 0.24 -1.2 749,486 - GFF673 0.50 +1.2 749,531 + GFF673 0.56 -0.6 749,531 + GFF673 0.56 -1.5 749,531 + GFF673 0.56 -1.1 749,531 + GFF673 0.56 +0.9 749,531 + GFF673 0.56 -0.5 749,532 - GFF673 0.57 +0.2 749,532 - GFF673 0.57 +0.1 749,532 - GFF673 0.57 -1.0 749,532 - GFF673 0.57 -2.7 749,552 + GFF673 0.59 +0.6 749,553 - GFF673 0.60 -0.7 749,615 + GFF673 0.69 -0.7 749,638 + GFF673 0.72 -0.6 749,638 + GFF673 0.72 -0.7 749,639 - GFF673 0.72 +0.5 749,639 - GFF673 0.72 +1.2 749,639 - GFF673 0.72 -0.1 749,656 + GFF673 0.74 -1.0 749,657 - GFF673 0.75 +0.6 749,712 + GFF673 0.83 -1.0 749,712 + GFF673 0.83 -1.5 749,713 - GFF673 0.83 -1.0 749,713 - GFF673 0.83 -1.4 749,760 + GFF673 0.89 -0.1 749,760 + GFF673 0.89 -1.1 749,761 - GFF673 0.90 -1.2 749,761 - GFF673 0.90 -1.1 749,796 + -0.9 749,796 + -1.3 749,796 + +1.1 749,796 + -0.7 749,830 + -2.5 749,830 + -0.9 749,830 + -1.1 749,830 + -1.1 749,831 - +0.1 749,846 + -0.3 749,847 - -1.5 749,868 + -1.2 749,881 + -1.0 749,901 + -1.5 749,902 - -0.8
Or see this region's nucleotide sequence