Experiment: NL-CCM; low oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06672 and MPMX19_06673 are separated by 359 nucleotides MPMX19_06673 and MPMX19_06674 are separated by 602 nucleotides
MPMX19_06672: MPMX19_06672 - hypothetical protein, at 236,113 to 236,790
_06672
MPMX19_06673: MPMX19_06673 - hypothetical protein, at 237,150 to 237,242
_06673
MPMX19_06674: MPMX19_06674 - hypothetical protein, at 237,845 to 238,279
_06674
Position (kb) 237
238 Strain fitness (log2 ratio) -2
-1
0
1
2 at 236.851 kb on + strand at 236.851 kb on + strand at 236.851 kb on + strand at 236.851 kb on + strand at 236.852 kb on - strand at 236.852 kb on - strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.045 kb on + strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.046 kb on - strand at 237.090 kb on + strand at 237.091 kb on - strand at 237.094 kb on + strand at 237.094 kb on + strand at 237.095 kb on - strand at 237.112 kb on - strand at 237.339 kb on + strand at 237.339 kb on + strand at 237.339 kb on + strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.340 kb on - strand at 237.372 kb on + strand at 237.384 kb on + strand at 237.385 kb on - strand at 237.385 kb on - strand at 237.385 kb on - strand at 237.432 kb on + strand at 237.432 kb on + strand at 237.507 kb on + strand at 237.507 kb on + strand at 237.507 kb on + strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.508 kb on - strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.517 kb on + strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.518 kb on - strand at 237.686 kb on + strand at 237.687 kb on - strand at 237.782 kb on + strand at 237.782 kb on + strand at 237.782 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; low oxygen remove 236,851 + -0.0 236,851 + -1.4 236,851 + +0.6 236,851 + -0.2 236,852 - -1.0 236,852 - +0.1 237,045 + -1.4 237,045 + -0.1 237,045 + +1.0 237,045 + +0.3 237,045 + +2.1 237,045 + +0.2 237,045 + +1.2 237,045 + -1.0 237,045 + +0.7 237,045 + +0.5 237,045 + +1.0 237,045 + +0.5 237,045 + -0.0 237,045 + +0.4 237,045 + -1.7 237,045 + -1.2 237,045 + +1.5 237,045 + +0.4 237,045 + +0.0 237,045 + -0.4 237,046 - -0.1 237,046 - +1.2 237,046 - -0.5 237,046 - -0.3 237,046 - +0.2 237,046 - -0.3 237,046 - +0.4 237,046 - +1.4 237,046 - -0.7 237,046 - -1.1 237,046 - -0.9 237,046 - +0.6 237,046 - -0.8 237,046 - -0.3 237,046 - -0.2 237,046 - +0.6 237,046 - +1.3 237,046 - -0.1 237,046 - -0.1 237,046 - -1.2 237,090 + +0.2 237,091 - -0.1 237,094 + -1.4 237,094 + -1.5 237,095 - -0.8 237,112 - -0.8 237,339 + -1.2 237,339 + +1.0 237,339 + -0.2 237,340 - +0.2 237,340 - -1.1 237,340 - -0.5 237,340 - +0.9 237,340 - -0.7 237,340 - +0.4 237,340 - +0.7 237,340 - +0.4 237,372 + -0.1 237,384 + -0.3 237,385 - +0.3 237,385 - -0.4 237,385 - +0.5 237,432 + -0.3 237,432 + -0.2 237,507 + -0.4 237,507 + +0.7 237,507 + +0.3 237,508 - +1.3 237,508 - +0.2 237,508 - -1.9 237,508 - +1.1 237,508 - +0.3 237,517 + -1.0 237,517 + -0.2 237,517 + +0.4 237,517 + +1.3 237,517 + -2.3 237,517 + +0.1 237,517 + +0.9 237,517 + +0.2 237,517 + -1.0 237,517 + +0.2 237,518 - -0.1 237,518 - +0.5 237,518 - +0.8 237,518 - +0.3 237,518 - +0.2 237,518 - -0.5 237,686 + -0.9 237,687 - -1.1 237,782 + -0.6 237,782 + -1.0 237,782 + -0.2
Or see this region's nucleotide sequence