Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03627

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,061,528	+		MPMX19_03626	0.42	+1.4
1,061,529	-		MPMX19_03626	0.42	-0.1
1,061,529	-		MPMX19_03626	0.42	-0.9
1,061,529	-		MPMX19_03626	0.42	+0.5
1,061,529	-		MPMX19_03626	0.42	-2.1
1,061,529	-		MPMX19_03626	0.42	-0.4
1,061,572	+		MPMX19_03626	0.46	-1.5
1,061,572	+		MPMX19_03626	0.46	+0.3
1,061,572	+		MPMX19_03626	0.46	+0.8
1,061,573	-		MPMX19_03626	0.46	+0.1
1,061,573	-		MPMX19_03626	0.46	-0.5
1,061,573	-		MPMX19_03626	0.46	-0.7
1,061,683	+		MPMX19_03626	0.55	-0.6
1,061,683	+		MPMX19_03626	0.55	-0.6
1,061,684	-		MPMX19_03626	0.55	-0.2
1,061,684	-		MPMX19_03626	0.55	-0.6
1,061,684	-		MPMX19_03626	0.55	+0.1
1,061,823	+		MPMX19_03626	0.68	-1.8
1,061,823	+		MPMX19_03626	0.68	-0.6
1,061,823	+		MPMX19_03626	0.68	+0.4
1,061,996	+		MPMX19_03626	0.83	-0.9
1,061,996	+		MPMX19_03626	0.83	-1.2
1,061,996	+		MPMX19_03626	0.83	-0.6
1,061,997	-		MPMX19_03626	0.83	-0.5
1,061,997	-		MPMX19_03626	0.83	-2.7
1,061,997	-		MPMX19_03626	0.83	+0.3
1,062,020	+		MPMX19_03626	0.85	-1.5
1,062,020	+		MPMX19_03626	0.85	+0.1
1,062,020	+		MPMX19_03626	0.85	+0.0
1,062,021	-		MPMX19_03626	0.85	-0.2
1,062,182	+				-0.9
1,062,182	+				-1.4
1,062,182	+				+0.4
1,062,182	+				-1.7
1,062,183	-				-0.2
1,062,183	-				-1.4
1,062,183	-				+1.3
1,062,183	-				-0.2
1,062,183	-				-1.4
1,062,183	-				+0.5
1,062,183	-				-1.2
1,062,183	-				-0.4
1,062,272	+				+0.6
1,062,272	+				+0.3
1,062,272	+				-0.5
1,062,272	+				-1.7
1,062,272	+				-0.6
1,062,273	-				-1.6
1,062,273	-				-2.0
1,062,273	-				-3.4
1,062,273	-				-0.4
1,062,273	-				-0.6
1,062,273	-				-0.5
1,062,291	+				-0.7
1,062,291	+				-1.0
1,062,291	+				+1.2
1,062,291	+				-0.7
1,062,292	-				+0.1
1,062,292	-				-1.8
1,062,292	-				-1.4
1,062,292	-				-0.5
1,062,319	+				+1.0
1,062,319	+				-0.2
1,062,319	+				-0.4
1,062,435	+				+0.8
1,062,436	-				-0.7
1,062,436	-				-0.4
1,062,702	+		MPMX19_03627	0.20	-0.4
1,062,702	+		MPMX19_03627	0.20	-0.1
1,062,702	+		MPMX19_03627	0.20	+0.1
1,062,702	+		MPMX19_03627	0.20	-2.3
1,062,703	-		MPMX19_03627	0.21	+0.1
1,062,703	-		MPMX19_03627	0.21	-0.4
1,062,703	-		MPMX19_03627	0.21	-1.0
1,062,703	-		MPMX19_03627	0.21	-0.8
1,062,703	-		MPMX19_03627	0.21	-0.6
1,062,703	-		MPMX19_03627	0.21	-1.7
1,062,703	-		MPMX19_03627	0.21	+0.2
1,062,888	+		MPMX19_03627	0.39	-0.0
1,062,888	+		MPMX19_03627	0.39	-0.4
1,062,889	-		MPMX19_03627	0.39	+0.6
1,062,981	+		MPMX19_03627	0.48	-0.7
1,062,981	+		MPMX19_03627	0.48	-1.9
1,062,982	-		MPMX19_03627	0.49	+0.2
1,062,982	-		MPMX19_03627	0.49	+0.1
1,062,982	-		MPMX19_03627	0.49	+0.1
1,063,161	+		MPMX19_03627	0.67	-1.7
1,063,161	+		MPMX19_03627	0.67	-1.2
1,063,161	+		MPMX19_03627	0.67	-0.5
1,063,161	+		MPMX19_03627	0.67	+0.3
1,063,161	+		MPMX19_03627	0.67	-0.4
1,063,161	+		MPMX19_03627	0.67	+0.0
1,063,161	+		MPMX19_03627	0.67	-1.2
1,063,162	-		MPMX19_03627	0.67	-1.7
1,063,162	-		MPMX19_03627	0.67	-0.4
1,063,162	-		MPMX19_03627	0.67	-1.5
1,063,162	-		MPMX19_03627	0.67	-1.0
1,063,162	-		MPMX19_03627	0.67	-0.5
1,063,168	-		MPMX19_03627	0.67	-0.1
1,063,251	+		MPMX19_03627	0.76	-1.4
1,063,251	+		MPMX19_03627	0.76	-0.7
1,063,251	+		MPMX19_03627	0.76	-0.2
1,063,251	+		MPMX19_03627	0.76	-0.2
1,063,251	+		MPMX19_03627	0.76	-0.9
1,063,252	-		MPMX19_03627	0.76	+0.1
1,063,252	-		MPMX19_03627	0.76	+1.1
1,063,252	-		MPMX19_03627	0.76	+0.1
1,063,252	-		MPMX19_03627	0.76	-0.5
1,063,252	-		MPMX19_03627	0.76	-1.4
1,063,252	-		MPMX19_03627	0.76	+1.6
1,063,252	-		MPMX19_03627	0.76	-0.4
1,063,532	-				-0.6
1,063,532	-				-1.8
1,063,852	+		MPMX19_03628	0.29	-0.2
1,064,008	+		MPMX19_03628	0.52	-0.2
1,064,009	-		MPMX19_03628	0.52	+0.2
1,064,047	+		MPMX19_03628	0.58	-1.0
1,064,047	+		MPMX19_03628	0.58	-0.2
1,064,047	+		MPMX19_03628	0.58	-1.8
1,064,047	+		MPMX19_03628	0.58	-0.5
1,064,047	+		MPMX19_03628	0.58	-0.8
1,064,047	+		MPMX19_03628	0.58	-0.3
1,064,048	-		MPMX19_03628	0.58	+1.3
1,064,048	-		MPMX19_03628	0.58	-1.1
1,064,048	-		MPMX19_03628	0.58	-0.9
1,064,048	-		MPMX19_03628	0.58	-1.7
1,064,048	-		MPMX19_03628	0.58	-0.5
1,064,048	-		MPMX19_03628	0.58	-1.8
1,064,048	-		MPMX19_03628	0.58	-0.8
1,064,048	-		MPMX19_03628	0.58	+0.1
1,064,048	-		MPMX19_03628	0.58	-0.8
1,064,048	-		MPMX19_03628	0.58	-0.7
1,064,048	-		MPMX19_03628	0.58	-0.9
1,064,048	-		MPMX19_03628	0.58	-0.8
1,064,048	-		MPMX19_03628	0.58	-0.7
1,064,191	+		MPMX19_03628	0.79	-1.3
1,064,191	+		MPMX19_03628	0.79	-0.3
1,064,191	+		MPMX19_03628	0.79	-0.0
1,064,191	+		MPMX19_03628	0.79	-0.6
1,064,191	+		MPMX19_03628	0.79	-2.1
1,064,191	+		MPMX19_03628	0.79	-1.7
1,064,191	+		MPMX19_03628	0.79	-1.1
1,064,191	+		MPMX19_03628	0.79	-0.8
1,064,191	+		MPMX19_03628	0.79	-1.4
1,064,192	-		MPMX19_03628	0.79	+1.3
1,064,192	-		MPMX19_03628	0.79	-0.7
1,064,192	-		MPMX19_03628	0.79	-0.2
1,064,192	-		MPMX19_03628	0.79	-0.5
1,064,192	-		MPMX19_03628	0.79	-0.8
1,064,192	-		MPMX19_03628	0.79	+0.9
1,064,192	-		MPMX19_03628	0.79	-1.3
1,064,192	-		MPMX19_03628	0.79	+0.2
1,064,192	-		MPMX19_03628	0.79	+0.3
1,064,234	-		MPMX19_03628	0.85	-0.2
1,064,252	-		MPMX19_03628	0.87	+0.9
1,064,252	-		MPMX19_03628	0.87	+1.2
1,064,257	+		MPMX19_03628	0.88	-0.4
1,064,257	+		MPMX19_03628	0.88	-0.0
1,064,257	+		MPMX19_03628	0.88	-1.1
1,064,257	+		MPMX19_03628	0.88	-0.2
1,064,257	+		MPMX19_03628	0.88	-0.7
1,064,257	+		MPMX19_03628	0.88	+0.1
1,064,258	-		MPMX19_03628	0.88	-0.5
1,064,258	-		MPMX19_03628	0.88	-0.9
1,064,258	-		MPMX19_03628	0.88	-0.1
1,064,258	-		MPMX19_03628	0.88	+2.1
1,064,258	-		MPMX19_03628	0.88	-1.4
1,064,258	-		MPMX19_03628	0.88	-1.2
1,064,258	-		MPMX19_03628	0.88	+0.6
1,064,258	-		MPMX19_03628	0.88	-0.0
1,064,427	+				-1.1
1,064,427	+				-0.1
1,064,428	-				-0.8
1,064,428	-				-2.2
1,064,428	-				-1.9
1,064,469	+		MPMX19_03629	0.19	-0.8
1,064,469	+		MPMX19_03629	0.19	+0.3
1,064,469	+		MPMX19_03629	0.19	+0.1
1,064,469	+		MPMX19_03629	0.19	-0.7
1,064,469	+		MPMX19_03629	0.19	-0.2
1,064,469	+		MPMX19_03629	0.19	+0.8
1,064,469	+		MPMX19_03629	0.19	+0.3
1,064,469	+		MPMX19_03629	0.19	-0.5
1,064,469	+		MPMX19_03629	0.19	-0.7
1,064,469	+		MPMX19_03629	0.19	+0.2
1,064,469	+		MPMX19_03629	0.19	+0.4
1,064,469	+		MPMX19_03629	0.19	-0.4
1,064,470	-		MPMX19_03629	0.19	-0.4
1,064,470	-		MPMX19_03629	0.19	-0.5
1,064,470	-		MPMX19_03629	0.19	-0.5
1,064,470	-		MPMX19_03629	0.19	-1.2
1,064,470	-		MPMX19_03629	0.19	+0.4
1,064,470	-		MPMX19_03629	0.19	-0.3
1,064,470	-		MPMX19_03629	0.19	-1.3
1,064,470	-		MPMX19_03629	0.19	+0.0
1,064,470	-		MPMX19_03629	0.19	+0.6
1,064,470	-		MPMX19_03629	0.19	-0.6
1,064,470	-		MPMX19_03629	0.19	-0.4