Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02761

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,904,428	+		MPMX19_02759	0.26	-1.7
2,904,428	+		MPMX19_02759	0.26	-0.4
2,904,428	+		MPMX19_02759	0.26	-1.2
2,904,428	+		MPMX19_02759	0.26	-2.5
2,904,428	+		MPMX19_02759	0.26	+1.0
2,904,428	+		MPMX19_02759	0.26	-1.0
2,904,590	+		MPMX19_02759	0.59	-1.4
2,904,590	+		MPMX19_02759	0.59	-0.7
2,904,590	+		MPMX19_02759	0.59	-0.9
2,904,590	+		MPMX19_02759	0.59	-0.6
2,904,590	+		MPMX19_02759	0.59	-2.7
2,904,590	+		MPMX19_02759	0.59	-0.2
2,904,590	+		MPMX19_02759	0.59	-0.4
2,904,590	+		MPMX19_02759	0.59	+0.4
2,904,590	+		MPMX19_02759	0.59	-1.1
2,904,590	+		MPMX19_02759	0.59	-1.5
2,904,590	+		MPMX19_02759	0.59	-0.3
2,904,590	+		MPMX19_02759	0.59	-2.2
2,904,591	-		MPMX19_02759	0.59	+0.4
2,904,591	-		MPMX19_02759	0.59	-1.4
2,904,591	-		MPMX19_02759	0.59	-0.2
2,904,591	-		MPMX19_02759	0.59	-1.6
2,904,591	-		MPMX19_02759	0.59	+0.3
2,904,591	-		MPMX19_02759	0.59	-0.4
2,904,591	-		MPMX19_02759	0.59	+1.0
2,904,591	-		MPMX19_02759	0.59	-1.4
2,904,591	-		MPMX19_02759	0.59	-1.1
2,904,795	+				+0.3
2,904,796	-				+0.3
2,904,796	-				+0.4
2,904,826	+				-0.6
2,904,826	+				+0.6
2,904,826	+				-0.2
2,904,826	+				-2.4
2,904,826	+				-1.4
2,904,826	+				+0.6
2,904,826	+				-1.6
2,904,826	+				-0.6
2,904,826	+				-1.4
2,904,827	-				+1.3
2,904,827	-				-0.4
2,904,827	-				+0.4
2,904,827	-				-0.3
2,904,827	-				-1.6
2,904,827	-				-1.2
2,904,827	-				+0.4
2,904,827	-				-1.9
2,904,827	-				-0.2
2,904,827	-				-1.9
2,904,828	+				+2.3
2,904,828	+				+0.3
2,904,828	+				-1.7
2,904,828	+				-0.6
2,904,828	+				+0.6
2,904,828	+				-0.2
2,904,829	-				-0.5
2,904,829	-				+0.7
2,904,829	-				-0.4
2,904,829	-				-0.9
2,904,829	-				-1.4
2,904,909	+				+0.6
2,904,909	+				+0.3
2,904,909	+				-0.1
2,904,909	+				+1.2
2,904,910	-				-2.2
2,904,910	-				-0.5
2,905,131	+				-1.1
2,905,131	+				-1.0
2,906,290	+		MPMX19_02761	0.47	+0.2
2,906,290	+		MPMX19_02761	0.47	-0.1
2,906,290	+		MPMX19_02761	0.47	-0.6
2,906,290	+		MPMX19_02761	0.47	-1.1
2,906,290	+		MPMX19_02761	0.47	-0.6
2,906,290	+		MPMX19_02761	0.47	+0.5
2,906,290	+		MPMX19_02761	0.47	-1.3
2,906,923	+		MPMX19_02761	0.77	-1.5
2,906,923	+		MPMX19_02761	0.77	+1.0
2,906,923	+		MPMX19_02761	0.77	-1.1
2,906,923	+		MPMX19_02761	0.77	+1.2
2,906,923	+		MPMX19_02761	0.77	-1.2
2,906,923	+		MPMX19_02761	0.77	-0.1
2,906,923	+		MPMX19_02761	0.77	+0.1
2,906,924	-		MPMX19_02761	0.77	-0.1
2,906,924	-		MPMX19_02761	0.77	-0.0
2,906,924	-		MPMX19_02761	0.77	-0.7
2,907,055	+		MPMX19_02761	0.83	-1.1
2,907,055	+		MPMX19_02761	0.83	-1.2
2,907,055	+		MPMX19_02761	0.83	+0.2
2,907,055	+		MPMX19_02761	0.83	-0.5
2,907,055	+		MPMX19_02761	0.83	+0.5
2,907,055	+		MPMX19_02761	0.83	-1.4
2,907,055	+		MPMX19_02761	0.83	+0.1
2,907,055	+		MPMX19_02761	0.83	+0.6
2,907,055	+		MPMX19_02761	0.83	-0.0
2,907,055	+		MPMX19_02761	0.83	+0.8
2,907,055	+		MPMX19_02761	0.83	-1.2
2,907,055	+		MPMX19_02761	0.83	+0.3
2,907,055	+		MPMX19_02761	0.83	+0.6
2,907,055	+		MPMX19_02761	0.83	-0.3
2,907,055	+		MPMX19_02761	0.83	-0.3
2,907,055	+		MPMX19_02761	0.83	-0.9
2,907,055	+		MPMX19_02761	0.83	-0.0
2,907,056	-		MPMX19_02761	0.84	-0.0
2,907,056	-		MPMX19_02761	0.84	-0.4
2,907,056	-		MPMX19_02761	0.84	+0.4
2,907,056	-		MPMX19_02761	0.84	-0.6
2,907,056	-		MPMX19_02761	0.84	-0.4
2,907,056	-		MPMX19_02761	0.84	-0.0
2,907,056	-		MPMX19_02761	0.84	+0.2
2,907,056	-		MPMX19_02761	0.84	-1.1
2,907,056	-		MPMX19_02761	0.84	+0.6
2,907,056	-		MPMX19_02761	0.84	-0.0
2,907,056	-		MPMX19_02761	0.84	-0.0
2,907,183	+		MPMX19_02761	0.90	-1.2
2,907,235	+				+0.6
2,907,235	+				-0.2
2,907,235	+				-0.7
2,907,235	+				-1.2
2,907,235	+				-0.5
2,907,235	+				-0.2
2,907,236	-				-1.5
2,907,236	-				-0.5
2,907,236	-				-0.7
2,907,236	-				-2.4
2,907,236	-				-1.5
2,907,348	-				-0.0
2,907,348	-				-1.0
2,907,423	+				-0.0
2,907,423	+				+0.1
2,907,424	-				+0.1
2,907,424	-				-0.7
2,907,468	+				-0.0
2,907,468	+				+1.0
2,907,468	+				-1.9
2,907,468	+				-1.6
2,907,468	+				-0.7
2,907,468	+				-1.6
2,907,469	-				-0.0
2,907,469	-				+0.3
2,907,469	-				-0.7
2,907,590	-				+1.9
2,907,590	-				-1.7
2,907,590	-				+1.0
2,907,611	+				-0.4
2,907,611	+				+1.2
2,907,611	+				+0.1
2,907,611	+				+0.6
2,907,612	-				-1.2
2,907,612	-				-1.4
2,907,612	-				-0.3
2,907,612	-				-2.0
2,907,612	-				-1.4
2,907,628	+				+0.2
2,907,629	-				-1.2
2,907,652	+				-1.6
2,907,652	+				-1.2
2,907,652	+				+0.4
2,907,652	+				-1.4
2,907,652	+				+0.6
2,907,652	+				-0.0
2,907,652	+				+0.9
2,907,652	+				+0.6
2,907,652	+				-0.9
2,907,653	-				-0.9
2,907,653	-				-0.6
2,907,731	+				-1.4
2,907,731	+				-1.5
2,907,732	-				+1.4
2,907,732	-				-2.6
2,907,732	-				+0.6
2,907,732	-				-0.2
2,907,732	-				-1.2
2,907,732	-				-0.2
2,908,056	+				+0.3
2,908,056	+				-1.0
2,908,056	+				+0.9
2,908,056	+				-1.2
2,908,056	+				+0.4
2,908,056	+				-0.7
2,908,056	+				+0.1
2,908,056	+				-0.6
2,908,056	+				-0.7
2,908,056	+				+0.3
2,908,056	+				-0.3
2,908,057	-				-2.6
2,908,057	-				-1.3
2,908,108	+				+0.6
2,908,108	+				+1.6
2,908,108	+				-0.7
2,908,108	+				-1.5
2,908,109	-				-0.2
2,908,109	-				-1.6
2,908,109	-				-0.7
2,908,109	-				+0.2
2,908,109	-				-0.7
2,908,168	+				-0.4
2,908,168	+				-1.8
2,908,169	-				-0.5
2,908,169	-				-1.1
2,908,169	-				-0.1
2,908,169	-				-0.6
2,908,276	+		MPMX19_02763	0.20	+0.6