Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02686

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,803,838	+				+0.1
2,803,838	+				-1.4
2,803,838	+				-1.7
2,803,839	-				-0.1
2,803,839	-				-0.0
2,803,839	-				-0.2
2,803,839	-				-2.0
2,803,839	-				+0.6
2,803,839	-				-0.6
2,803,842	+				-0.2
2,803,842	+				-0.7
2,803,842	+				+0.2
2,803,842	+				-0.5
2,803,842	+				-0.1
2,803,842	+				-0.2
2,803,842	+				+0.7
2,803,842	+				-0.4
2,803,842	+				+0.7
2,803,842	+				-1.0
2,803,842	+				+1.3
2,803,842	+				-0.3
2,803,842	+				-0.1
2,803,842	+				+1.6
2,803,843	-				-0.6
2,803,843	-				-0.3
2,803,843	-				-0.6
2,803,843	-				-0.4
2,803,843	-				+0.1
2,803,843	-				+1.0
2,803,843	-				-0.7
2,803,843	-				+0.8
2,803,843	-				-0.3
2,803,843	-				-1.9
2,803,843	-				-0.4
2,803,843	-				-2.0
2,803,843	-				-1.2
2,803,843	-				-1.0
2,803,843	-				+0.6
2,803,843	-				-0.9
2,803,857	-				-3.2
2,803,857	-				-0.0
2,803,857	-				-1.0
2,803,857	-				+1.2
2,803,857	-				+2.3
2,803,916	+				-0.2
2,803,916	+				-0.6
2,803,916	+				-0.6
2,803,916	+				+0.7
2,803,916	+				+1.0
2,803,916	+				+0.1
2,803,916	+				-0.2
2,803,916	+				+1.1
2,803,916	+				+0.4
2,803,916	+				+0.4
2,803,916	+				-0.6
2,803,916	+				-0.3
2,803,916	+				-1.7
2,803,916	+				+0.5
2,803,916	+				-0.1
2,803,917	-				-2.3
2,803,917	-				-1.0
2,803,917	-				-0.4
2,803,917	-				-1.5
2,803,917	-				+0.3
2,803,917	-				-0.4
2,803,917	-				+0.8
2,803,917	-				+0.8
2,803,917	-				-0.3
2,803,917	-				-1.0
2,803,917	-				-0.2
2,803,917	-				-0.4
2,803,917	-				-2.2
2,803,952	+				-1.4
2,803,952	+				-2.1
2,803,952	+				-0.2
2,803,952	+				+1.6
2,803,953	-				-0.3
2,803,953	-				-0.6
2,803,953	-				-0.0
2,803,953	-				+1.0
2,803,953	-				-1.0
2,803,953	-				+0.6
2,803,953	-				-1.0
2,803,953	-				-1.4
2,804,074	+				-0.2
2,804,074	+				-0.4
2,804,074	+				-1.6
2,804,074	+				+0.3
2,804,074	+				-0.3
2,804,074	+				-0.6
2,804,074	+				-1.0
2,804,074	+				-0.1
2,804,074	+				+0.8
2,804,074	+				-0.3
2,804,074	+				+0.4
2,804,075	-				-0.4
2,804,075	-				+1.3
2,804,075	-				+0.5
2,804,075	-				+0.6
2,804,075	-				-1.4
2,804,075	-				-0.2
2,804,075	-				+0.6
2,804,075	-				+0.3
2,804,075	-				-0.5
2,804,075	-				-0.2
2,804,075	-				+0.1
2,804,075	-				-0.5
2,804,236	+				-1.5
2,804,236	+				+0.3
2,804,236	+				-0.6
2,804,236	+				-0.6
2,804,236	+				-0.7
2,804,236	+				-0.8
2,804,236	+				-1.0
2,804,236	+				-0.7
2,804,236	+				-0.4
2,804,236	+				-2.3
2,804,236	+				+0.5
2,804,236	+				-0.9
2,804,236	+				-1.1
2,804,236	+				+0.2
2,804,236	+				-1.0
2,804,236	+				-1.1
2,804,236	+				+1.1
2,804,236	+				-1.5
2,804,236	+				-0.2
2,804,236	+				-0.0
2,804,236	+				-0.0
2,804,236	+				-0.6
2,804,236	+				-0.6
2,804,236	+				+0.1
2,804,236	+				-1.1
2,804,236	+				+0.6
2,804,236	+				-2.1
2,804,236	+				+0.1
2,804,236	+				-1.3
2,804,236	+				-2.2
2,804,236	+				+0.2
2,804,236	+				-0.4
2,804,236	+				+0.3
2,804,237	-				-1.1
2,804,237	-				-1.0
2,804,237	-				-0.0
2,804,237	-				+0.4
2,804,237	-				-0.4
2,804,237	-				-0.5
2,804,237	-				+0.2
2,804,237	-				-1.1
2,804,237	-				-0.8
2,804,237	-				+0.2
2,804,237	-				-1.0
2,804,237	-				-2.1
2,804,237	-				+0.8
2,804,237	-				-0.5
2,804,237	-				-0.7
2,804,237	-				-0.4
2,804,237	-				+2.0
2,804,237	-				+0.2
2,804,237	-				-1.6
2,804,237	-				+0.6
2,804,237	-				-0.9
2,804,237	-				+0.2
2,804,237	-				-2.8
2,804,237	-				-2.6
2,804,237	-				-0.1
2,804,237	-				+0.4
2,804,237	-				-0.1
2,804,237	-				-0.5
2,804,300	+				-1.6
2,804,300	+				-0.9
2,804,301	-				-0.6
2,804,301	-				-0.7
2,804,352	+				-1.1
2,804,352	+				-0.0
2,804,352	+				-0.5
2,804,352	+				-0.1
2,804,352	+				-0.6
2,804,352	+				-0.9
2,804,352	+				-0.3
2,804,352	+				+0.3
2,804,353	-				-2.4
2,804,353	-				-0.0
2,804,353	-				-1.4
2,804,493	+				-0.8
2,804,493	+				-1.1
2,804,493	+				-0.9
2,804,493	+				-1.2
2,804,493	+				-1.1
2,804,493	+				-0.7
2,804,493	+				-1.4
2,804,493	+				-0.7
2,804,493	+				-2.7
2,804,493	+				-1.7
2,804,493	+				-0.3
2,804,494	-				+1.6
2,804,494	-				-0.7
2,804,494	-				-0.4
2,804,494	-				+0.1
2,804,494	-				-0.6
2,804,494	-				-0.0
2,804,494	-				+0.3
2,804,494	-				-2.7
2,804,494	-				-0.7
2,804,503	+				-0.5
2,804,503	+				+0.5
2,804,503	+				-0.4
2,804,503	+				-0.9
2,804,503	+				-0.2
2,804,504	-				-0.2
2,804,549	+				-1.1
2,804,549	+				-1.0
2,804,550	-				+0.3
2,804,550	-				-0.0
2,804,550	-				-0.2
2,804,550	-				-0.7
2,804,550	-				-0.4
2,804,550	-				-1.2
2,804,567	-				-1.7
2,804,567	-				-1.2
2,804,575	+				-1.2
2,804,575	+				-0.5
2,804,575	+				-0.9
2,804,575	+				-0.3
2,804,575	+				-0.3
2,804,576	-				-0.3
2,804,576	-				-1.0
2,804,576	-				-1.6
2,804,576	-				+0.3
2,804,576	-				+0.2
2,804,576	-				-0.0
2,804,583	+				-0.1
2,804,583	+				-0.3
2,804,583	+				-0.4
2,804,583	+				+0.1
2,804,583	+				-0.0
2,804,583	+				-1.3
2,804,583	+				-1.2
2,804,583	+				+1.3
2,804,583	+				-1.0
2,804,583	+				-1.3
2,804,583	+				-2.5
2,804,583	+				-0.6
2,804,584	-				-0.9
2,804,584	-				-1.0
2,804,584	-				+0.7
2,804,584	-				+0.4
2,804,584	-				-0.4
2,804,584	-				+0.3
2,804,584	-				+0.4
2,804,584	-				-0.7
2,804,584	-				+0.8
2,804,584	-				-2.6
2,804,584	-				-0.3
2,804,584	-				+0.2
2,804,584	-				-0.6
2,804,584	-				-1.0
2,804,584	-				-0.2
2,804,584	-				-1.0
2,804,693	+				-0.2
2,804,693	+				+0.8
2,804,693	+				-0.5
2,804,693	+				+0.8
2,804,693	+				-0.7
2,804,693	+				+0.6
2,804,693	+				+0.6
2,804,693	+				+0.4
2,804,693	+				+1.1
2,804,693	+				-0.4
2,804,693	+				-0.4
2,804,693	+				-0.7
2,804,693	+				-0.0
2,804,693	+				-0.1
2,804,693	+				+0.3
2,804,693	+				-0.4
2,804,693	+				-0.0
2,804,693	+				-1.0
2,804,694	-				-1.0
2,804,694	-				+1.0
2,804,694	-				-1.3
2,804,694	-				-1.1
2,804,694	-				+0.6
2,804,753	+				+0.5
2,804,753	+				+0.5
2,804,753	+				+0.2
2,804,753	+				-0.7
2,804,753	+				-0.2
2,804,753	+				-1.6
2,804,753	+				+0.1
2,804,754	-				+0.5
2,804,754	-				-1.1
2,804,754	-				-0.2
2,804,754	-				-0.3
2,804,754	-				-0.0
2,804,754	-				-1.9
2,804,754	-				-0.7
2,804,754	-				+1.4
2,804,754	-				-0.9
2,804,754	-				-2.2
2,804,754	-				-1.2
2,804,777	+				+0.3
2,804,778	-				-1.0
2,804,826	+		MPMX19_02686	0.17	+0.3
2,804,826	+		MPMX19_02686	0.17	-0.2
2,804,826	+		MPMX19_02686	0.17	-1.4
2,804,826	+		MPMX19_02686	0.17	+0.4
2,804,826	+		MPMX19_02686	0.17	-0.7
2,804,826	+		MPMX19_02686	0.17	+0.9
2,804,826	+		MPMX19_02686	0.17	-0.3
2,804,827	-		MPMX19_02686	0.18	-0.5
2,804,827	-		MPMX19_02686	0.18	-1.2
2,804,827	-		MPMX19_02686	0.18	+1.1
2,804,827	-		MPMX19_02686	0.18	-0.7
2,804,827	-		MPMX19_02686	0.18	-0.2
2,804,827	-		MPMX19_02686	0.18	+0.6
2,804,827	-		MPMX19_02686	0.18	-0.6
2,804,827	-		MPMX19_02686	0.18	+0.1
2,804,827	-		MPMX19_02686	0.18	-1.2
2,804,827	-		MPMX19_02686	0.18	-1.1
2,804,827	-		MPMX19_02686	0.18	+1.3
2,804,947	+		MPMX19_02686	0.49	-0.0
2,804,947	+		MPMX19_02686	0.49	+0.7
2,804,947	+		MPMX19_02686	0.49	-0.6
2,804,947	+		MPMX19_02686	0.49	+0.6
2,804,947	+		MPMX19_02686	0.49	-0.0
2,804,948	-		MPMX19_02686	0.50	+0.3
2,804,948	-		MPMX19_02686	0.50	+0.6
2,804,948	-		MPMX19_02686	0.50	-0.9
2,805,089	+		MPMX19_02686	0.87	+0.6
2,805,089	+		MPMX19_02686	0.87	-0.2
2,805,089	+		MPMX19_02686	0.87	-0.0
2,805,089	+		MPMX19_02686	0.87	-0.8
2,805,089	+		MPMX19_02686	0.87	+0.4
2,805,090	-		MPMX19_02686	0.87	+0.3
2,805,090	-		MPMX19_02686	0.87	-1.2
2,805,090	-		MPMX19_02686	0.87	+0.1
2,805,090	-		MPMX19_02686	0.87	-0.6
2,805,090	-		MPMX19_02686	0.87	+0.2
2,805,090	-		MPMX19_02686	0.87	-0.4
2,805,090	-		MPMX19_02686	0.87	+0.8
2,805,090	-		MPMX19_02686	0.87	-0.1
2,805,090	-		MPMX19_02686	0.87	-0.9
2,805,135	+				-0.3
2,805,135	+				+0.3
2,805,135	+				+0.6
2,805,136	-				-1.6
2,805,136	-				-2.2
2,805,136	-				+0.4
2,805,136	-				+0.3
2,805,136	-				-0.4
2,805,136	-				-1.6
2,805,138	+				-0.3
2,805,154	-				-0.8
2,805,154	-				-0.5
2,805,154	-				+0.2
2,805,183	+				-0.0
2,805,183	+				-0.0
2,805,183	+				-0.9
2,805,202	+				-0.2
2,805,208	+				-1.0
2,805,208	+				-0.9
2,805,235	-				-1.7
2,805,244	+				+0.1
2,805,244	+				-0.0
2,805,244	+				-1.0
2,805,244	+				-0.0
2,805,245	-				-1.3
2,805,245	-				-0.4
2,805,267	+				-1.2
2,805,267	+				+0.0
2,805,268	-				-0.5
2,805,324	+				-0.3
2,805,324	+				-1.9
2,805,324	+				+0.6
2,805,324	+				-0.4
2,805,325	-				+0.4
2,805,325	-				-0.1
2,805,338	-				-1.0
2,805,365	+				-2.0
2,805,365	+				-1.9
2,805,366	-				+0.1
2,805,366	-				+1.9
2,805,391	+				-0.5
2,805,391	+				-0.5
2,805,391	+				-0.4
2,805,392	-				-0.3
2,805,392	-				+0.5
2,805,392	-				-1.1
2,805,392	-				+1.0
2,805,395	+				-0.0
2,805,395	+				-0.3
2,805,395	+				-0.2
2,805,395	+				+0.3
2,805,395	+				+0.7
2,805,396	-				-0.1
2,805,396	-				-0.4
2,805,396	-				-0.0
2,805,553	-		MPMX19_02687	0.10	+0.4
2,805,569	+		MPMX19_02687	0.12	-1.7
2,805,575	+		MPMX19_02687	0.13	-0.0
2,805,637	-		MPMX19_02687	0.21	+1.2
2,805,647	+		MPMX19_02687	0.22	-0.4
2,805,648	-		MPMX19_02687	0.22	+0.8
2,805,654	+		MPMX19_02687	0.23	+0.4
2,805,669	-		MPMX19_02687	0.25	-1.6
2,805,712	+		MPMX19_02687	0.31	+0.7
2,805,712	+		MPMX19_02687	0.31	-0.0
2,805,712	+		MPMX19_02687	0.31	-0.2
2,805,713	-		MPMX19_02687	0.31	+0.8
2,805,713	-		MPMX19_02687	0.31	-1.4
2,805,713	-		MPMX19_02687	0.31	-0.3
2,805,713	-		MPMX19_02687	0.31	-0.0
2,805,713	-		MPMX19_02687	0.31	+0.3
2,805,713	-		MPMX19_02687	0.31	-0.4
2,805,778	+		MPMX19_02687	0.39	+0.6
2,805,781	+		MPMX19_02687	0.39	-0.3
2,805,782	-		MPMX19_02687	0.39	-0.0
2,805,797	-		MPMX19_02687	0.41	-0.6
2,805,814	-		MPMX19_02687	0.43	-1.0
2,805,846	-		MPMX19_02687	0.48	-1.0
2,805,848	+		MPMX19_02687	0.48	-0.2
2,805,886	+		MPMX19_02687	0.53	+0.7
2,805,887	-		MPMX19_02687	0.53	-0.4
2,805,887	-		MPMX19_02687	0.53	-0.7
2,805,939	+		MPMX19_02687	0.59	-0.3
2,805,940	-		MPMX19_02687	0.59	-0.6
2,805,940	-		MPMX19_02687	0.59	-1.6
2,805,940	-		MPMX19_02687	0.59	+1.0
2,805,986	+		MPMX19_02687	0.65	-0.7
2,806,022	+		MPMX19_02687	0.70	-1.2
2,806,114	+		MPMX19_02687	0.81	+0.1
2,806,127	-		MPMX19_02687	0.83	-2.3
2,806,128	+		MPMX19_02687	0.83	-0.5