Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01938

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,019,283	+		MPMX19_01937	0.59	-1.1
2,019,283	+		MPMX19_01937	0.59	-0.3
2,019,283	+		MPMX19_01937	0.59	-0.8
2,019,283	+		MPMX19_01937	0.59	-1.1
2,019,283	+		MPMX19_01937	0.59	-2.5
2,019,283	+		MPMX19_01937	0.59	-1.0
2,019,283	+		MPMX19_01937	0.59	-2.0
2,019,283	+		MPMX19_01937	0.59	-1.9
2,019,283	+		MPMX19_01937	0.59	-0.3
2,019,283	+		MPMX19_01937	0.59	-0.2
2,019,283	+		MPMX19_01937	0.59	-1.7
2,019,283	+		MPMX19_01937	0.59	-0.2
2,019,283	+		MPMX19_01937	0.59	-0.8
2,019,283	+		MPMX19_01937	0.59	-2.6
2,019,283	+		MPMX19_01937	0.59	-1.6
2,019,283	+		MPMX19_01937	0.59	-0.4
2,019,284	-		MPMX19_01937	0.59	-2.4
2,019,284	-		MPMX19_01937	0.59	+0.7
2,019,284	-		MPMX19_01937	0.59	+0.5
2,019,284	-		MPMX19_01937	0.59	-3.8
2,019,284	-		MPMX19_01937	0.59	-0.2
2,019,284	-		MPMX19_01937	0.59	-2.4
2,019,637	+		MPMX19_01937	0.84	-1.9
2,019,637	+		MPMX19_01937	0.84	-1.4
2,019,637	+		MPMX19_01937	0.84	-1.3
2,019,637	+		MPMX19_01937	0.84	-2.3
2,019,637	+		MPMX19_01937	0.84	-1.1
2,019,638	-		MPMX19_01937	0.84	-0.5
2,019,638	-		MPMX19_01937	0.84	-1.0
2,019,638	-		MPMX19_01937	0.84	+0.9
2,019,638	-		MPMX19_01937	0.84	-0.7
2,019,638	-		MPMX19_01937	0.84	-2.1
2,019,638	-		MPMX19_01937	0.84	-1.8
2,019,718	+		MPMX19_01937	0.89	-1.2
2,019,718	+		MPMX19_01937	0.89	-2.1
2,019,718	+		MPMX19_01937	0.89	-2.7
2,019,718	+		MPMX19_01937	0.89	-1.7
2,019,718	+		MPMX19_01937	0.89	-2.0
2,019,718	+		MPMX19_01937	0.89	-2.8
2,019,718	+		MPMX19_01937	0.89	-2.1
2,019,718	+		MPMX19_01937	0.89	-1.5
2,019,718	+		MPMX19_01937	0.89	-1.0
2,019,718	+		MPMX19_01937	0.89	-0.1
2,019,718	+		MPMX19_01937	0.89	-1.5
2,019,719	-		MPMX19_01937	0.90	-0.5
2,019,719	-		MPMX19_01937	0.90	-0.7
2,019,719	-		MPMX19_01937	0.90	+0.8
2,019,719	-		MPMX19_01937	0.90	-0.1
2,019,719	-		MPMX19_01937	0.90	-1.6
2,019,769	+				-2.6
2,019,769	+				-0.3
2,019,769	+				-0.6
2,019,769	+				-1.8
2,019,769	+				-0.8
2,019,769	+				-1.7
2,019,770	-				-0.2
2,019,770	-				+0.3
2,019,770	-				-0.4
2,019,770	-				-0.8
2,019,871	+				-0.8
2,019,871	+				-2.0
2,019,871	+				-0.1
2,019,871	+				-1.7
2,019,871	+				-1.4
2,019,871	+				-1.5
2,019,871	+				-3.1
2,019,871	+				-0.8
2,019,871	+				-0.5
2,019,871	+				-0.9
2,019,871	+				-0.2
2,019,871	+				-1.1
2,019,871	+				-2.4
2,019,871	+				-1.3
2,019,871	+				-1.7
2,019,871	+				-0.3
2,019,871	+				-1.5
2,019,871	+				-1.8
2,019,871	+				-1.4
2,019,871	+				-0.9
2,019,872	-				-0.7
2,019,872	-				-0.2
2,019,872	-				-1.5
2,019,872	-				-1.4
2,019,872	-				-0.1
2,019,872	-				-2.3
2,019,872	-				-0.5
2,019,872	-				+1.5
2,019,872	-				-0.8
2,019,872	-				+0.0
2,019,872	-				-1.0
2,019,872	-				-0.5
2,019,872	-				-0.5
2,019,872	-				-0.1
2,019,872	-				-1.5
2,019,872	-				-1.0
2,019,872	-				+0.2
2,019,872	-				+0.5
2,019,950	-				-1.1
2,020,007	+				+0.7
2,020,007	+				-1.2
2,020,008	-				-0.7
2,020,052	+		MPMX19_01938	0.12	-1.9
2,020,052	+		MPMX19_01938	0.12	-1.5
2,020,052	+		MPMX19_01938	0.12	-0.6
2,020,052	+		MPMX19_01938	0.12	+0.2
2,020,052	+		MPMX19_01938	0.12	-1.0
2,020,052	+		MPMX19_01938	0.12	-0.8
2,020,052	+		MPMX19_01938	0.12	-1.5
2,020,052	+		MPMX19_01938	0.12	+0.5
2,020,052	+		MPMX19_01938	0.12	+1.0
2,020,052	+		MPMX19_01938	0.12	-1.4
2,020,052	+		MPMX19_01938	0.12	-0.4
2,020,052	+		MPMX19_01938	0.12	-1.5
2,020,052	+		MPMX19_01938	0.12	-1.5
2,020,052	+		MPMX19_01938	0.12	-0.3
2,020,053	-		MPMX19_01938	0.12	-2.9
2,020,053	-		MPMX19_01938	0.12	-0.6
2,020,053	-		MPMX19_01938	0.12	+0.3
2,020,053	-		MPMX19_01938	0.12	-0.3
2,020,053	-		MPMX19_01938	0.12	-0.9
2,020,053	-		MPMX19_01938	0.12	-0.6
2,020,053	-		MPMX19_01938	0.12	-0.2
2,020,053	-		MPMX19_01938	0.12	-2.0
2,020,053	-		MPMX19_01938	0.12	+0.3
2,020,053	-		MPMX19_01938	0.12	+0.3
2,020,053	-		MPMX19_01938	0.12	+0.5
2,020,053	-		MPMX19_01938	0.12	-0.5
2,020,053	-		MPMX19_01938	0.12	-0.2
2,020,053	-		MPMX19_01938	0.12	-1.1
2,020,053	-		MPMX19_01938	0.12	-0.2
2,020,057	+		MPMX19_01938	0.12	-2.0
2,020,093	+		MPMX19_01938	0.14	-0.8
2,020,093	+		MPMX19_01938	0.14	-2.1
2,020,195	+		MPMX19_01938	0.21	+0.9
2,020,195	+		MPMX19_01938	0.21	-0.8
2,020,195	+		MPMX19_01938	0.21	+0.0
2,020,196	-		MPMX19_01938	0.21	-2.1
2,021,344	+				+0.4
2,021,344	+				-0.7
2,021,345	-				+0.5
2,021,345	-				-0.1
2,021,345	-				-0.7
2,021,345	-				+0.9
2,021,345	-				-1.1
2,021,434	+				-1.3
2,021,435	-				+0.4
2,021,824	+		MPMX19_01939	0.25	-0.5
2,021,824	+		MPMX19_01939	0.25	-1.3
2,021,824	+		MPMX19_01939	0.25	+0.3
2,021,825	-		MPMX19_01939	0.25	-0.1
2,021,825	-		MPMX19_01939	0.25	-0.5
2,021,825	-		MPMX19_01939	0.25	-0.1
2,021,825	-		MPMX19_01939	0.25	-1.4
2,021,896	+		MPMX19_01939	0.29	-0.7
2,021,896	+		MPMX19_01939	0.29	-1.1
2,021,944	+		MPMX19_01939	0.32	+0.5
2,021,945	-		MPMX19_01939	0.32	-0.5
2,021,945	-		MPMX19_01939	0.32	+0.2
2,021,945	-		MPMX19_01939	0.32	-0.5
2,021,945	-		MPMX19_01939	0.32	-0.1
2,021,945	-		MPMX19_01939	0.32	-0.8
2,021,945	-		MPMX19_01939	0.32	+0.8
2,021,989	+		MPMX19_01939	0.35	-2.1
2,021,990	-		MPMX19_01939	0.35	+0.2
2,022,113	-		MPMX19_01939	0.43	-0.5
2,022,202	+		MPMX19_01939	0.49	-0.8
2,022,281	-		MPMX19_01939	0.54	-1.1
2,022,331	+		MPMX19_01939	0.57	+1.8
2,022,331	+		MPMX19_01939	0.57	-1.1
2,022,332	-		MPMX19_01939	0.57	-0.1
2,022,332	-		MPMX19_01939	0.57	-1.5
2,022,332	-		MPMX19_01939	0.57	+0.9
2,022,397	+		MPMX19_01939	0.61	-0.1
2,022,397	+		MPMX19_01939	0.61	-0.3
2,022,398	-		MPMX19_01939	0.61	-1.1