Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01768

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,853,846	-				-0.9
1,853,846	-				-0.2
1,853,938	+		MPMX19_01767	0.11	-0.5
1,853,938	+		MPMX19_01767	0.11	+0.2
1,853,938	+		MPMX19_01767	0.11	+0.9
1,853,938	+		MPMX19_01767	0.11	-1.8
1,853,938	+		MPMX19_01767	0.11	-0.8
1,853,938	+		MPMX19_01767	0.11	-0.9
1,853,938	+		MPMX19_01767	0.11	-0.5
1,853,938	+		MPMX19_01767	0.11	-0.0
1,853,938	+		MPMX19_01767	0.11	-0.2
1,853,938	+		MPMX19_01767	0.11	-0.4
1,853,938	+		MPMX19_01767	0.11	-0.0
1,853,939	-		MPMX19_01767	0.11	+0.6
1,853,939	-		MPMX19_01767	0.11	-2.4
1,853,939	-		MPMX19_01767	0.11	-1.0
1,853,939	-		MPMX19_01767	0.11	-1.0
1,853,939	-		MPMX19_01767	0.11	+0.6
1,853,939	-		MPMX19_01767	0.11	+0.5
1,853,939	-		MPMX19_01767	0.11	+0.7
1,853,939	-		MPMX19_01767	0.11	-0.6
1,853,939	-		MPMX19_01767	0.11	-0.0
1,853,939	-		MPMX19_01767	0.11	-1.5
1,853,939	-		MPMX19_01767	0.11	+0.2
1,853,939	-		MPMX19_01767	0.11	-0.3
1,853,939	-		MPMX19_01767	0.11	+0.4
1,853,939	-		MPMX19_01767	0.11	-2.3
1,853,939	-		MPMX19_01767	0.11	+0.5
1,853,939	-		MPMX19_01767	0.11	-0.6
1,854,000	+		MPMX19_01767	0.22	+0.5
1,854,000	+		MPMX19_01767	0.22	-0.0
1,854,000	+		MPMX19_01767	0.22	-1.2
1,854,000	+		MPMX19_01767	0.22	-0.5
1,854,000	+		MPMX19_01767	0.22	-2.0
1,854,000	+		MPMX19_01767	0.22	-1.0
1,854,000	+		MPMX19_01767	0.22	+0.2
1,854,000	+		MPMX19_01767	0.22	+1.5
1,854,000	+		MPMX19_01767	0.22	-1.3
1,854,000	+		MPMX19_01767	0.22	-2.0
1,854,000	+		MPMX19_01767	0.22	-0.5
1,854,000	+		MPMX19_01767	0.22	-0.7
1,854,000	+		MPMX19_01767	0.22	-1.3
1,854,000	+		MPMX19_01767	0.22	-0.5
1,854,000	+		MPMX19_01767	0.22	-0.2
1,854,000	+		MPMX19_01767	0.22	-0.9
1,854,000	+		MPMX19_01767	0.22	+1.0
1,854,000	+		MPMX19_01767	0.22	+0.9
1,854,000	+		MPMX19_01767	0.22	+0.5
1,854,000	+		MPMX19_01767	0.22	+1.0
1,854,000	+		MPMX19_01767	0.22	-0.7
1,854,000	+		MPMX19_01767	0.22	+0.4
1,854,000	+		MPMX19_01767	0.22	+1.2
1,854,000	+		MPMX19_01767	0.22	+0.5
1,854,000	+		MPMX19_01767	0.22	-0.0
1,854,000	+		MPMX19_01767	0.22	-0.0
1,854,000	+		MPMX19_01767	0.22	-0.4
1,854,000	+		MPMX19_01767	0.22	-0.4
1,854,000	+		MPMX19_01767	0.22	+0.7
1,854,000	+		MPMX19_01767	0.22	+1.2
1,854,001	-		MPMX19_01767	0.22	-1.0
1,854,001	-		MPMX19_01767	0.22	-1.5
1,854,001	-		MPMX19_01767	0.22	+0.5
1,854,001	-		MPMX19_01767	0.22	-0.3
1,854,001	-		MPMX19_01767	0.22	-0.3
1,854,001	-		MPMX19_01767	0.22	-0.0
1,854,001	-		MPMX19_01767	0.22	-0.2
1,854,001	-		MPMX19_01767	0.22	+0.4
1,854,001	-		MPMX19_01767	0.22	-2.7
1,854,001	-		MPMX19_01767	0.22	+1.3
1,854,001	-		MPMX19_01767	0.22	-0.3
1,854,001	-		MPMX19_01767	0.22	-0.6
1,854,001	-		MPMX19_01767	0.22	-0.2
1,854,001	-		MPMX19_01767	0.22	+1.1
1,854,001	-		MPMX19_01767	0.22	+1.9
1,854,001	-		MPMX19_01767	0.22	-0.1
1,854,001	-		MPMX19_01767	0.22	+0.0
1,854,001	-		MPMX19_01767	0.22	-2.3
1,854,001	-		MPMX19_01767	0.22	-1.6
1,854,001	-		MPMX19_01767	0.22	-1.3
1,854,001	-		MPMX19_01767	0.22	-0.7
1,854,001	-		MPMX19_01767	0.22	+2.5
1,854,001	-		MPMX19_01767	0.22	+1.0
1,854,001	-		MPMX19_01767	0.22	-0.8
1,854,001	-		MPMX19_01767	0.22	-0.0
1,854,001	-		MPMX19_01767	0.22	-0.5
1,854,001	-		MPMX19_01767	0.22	-2.2
1,854,001	-		MPMX19_01767	0.22	-0.3
1,854,001	-		MPMX19_01767	0.22	-0.0
1,854,001	-		MPMX19_01767	0.22	+0.1
1,854,001	-		MPMX19_01767	0.22	-0.2
1,854,001	-		MPMX19_01767	0.22	-2.7
1,854,001	-		MPMX19_01767	0.22	-0.7
1,854,112	+		MPMX19_01767	0.42	+1.4
1,854,430	+				-1.6
1,854,430	+				+0.0
1,854,430	+				-0.2
1,854,430	+				+0.1
1,854,430	+				+0.6
1,854,430	+				-0.0
1,854,430	+				-0.3
1,854,430	+				-0.1
1,854,430	+				-0.5
1,854,430	+				-1.0
1,854,431	-				-0.8
1,854,431	-				-0.5
1,854,431	-				+0.1
1,854,431	-				+0.5
1,854,431	-				-0.5
1,854,431	-				-0.0
1,854,431	-				-0.0
1,854,431	-				+0.1
1,854,431	-				+0.0
1,854,468	+				-1.3
1,854,468	+				-2.3
1,854,468	+				-0.4
1,854,468	+				-1.5
1,854,469	-				-0.9
1,854,469	-				-0.3
1,854,469	-				-1.8
1,854,469	-				-1.0
1,854,493	+				-1.7
1,854,493	+				-0.6
1,854,493	+				-0.6
1,854,493	+				-1.2
1,854,493	+				-1.3
1,854,493	+				-0.3
1,854,494	-				+0.2
1,854,494	-				-0.5
1,854,494	-				-0.5
1,854,494	-				-0.3
1,854,494	-				+1.0
1,854,494	-				-0.8
1,854,578	+				+1.8
1,854,578	+				-0.1
1,854,578	+				+1.2
1,854,578	+				-0.9
1,854,578	+				-1.4
1,854,578	+				-0.0
1,854,579	-				-1.3
1,854,579	-				+0.3
1,854,579	-				+0.1
1,854,579	-				-0.0
1,854,579	-				-0.9
1,854,579	-				-0.5
1,854,579	-				-1.3
1,854,579	-				-0.5
1,854,579	-				-0.3
1,854,581	+				-0.9
1,854,581	+				-1.5
1,854,582	-				-1.0
1,854,582	-				+0.5
1,854,582	-				+1.1
1,854,582	-				-1.0
1,854,582	-				+1.9
1,854,587	+				-1.5
1,854,587	+				-0.5
1,854,715	+				-0.8
1,854,738	+				+0.5
1,854,738	+				-0.0
1,854,738	+				+0.4
1,854,738	+				-0.5
1,854,738	+				-0.5
1,854,738	+				+0.2
1,854,738	+				-1.3
1,854,738	+				-0.5
1,854,738	+				+2.0
1,854,738	+				+1.2
1,855,829	+				-0.5
1,855,829	+				+0.1
1,855,829	+				+0.5
1,855,841	+				-1.0
1,855,841	+				+1.1
1,855,887	+				+0.2
1,855,908	+				+0.0