Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01359

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,411,960	+		MPMX19_01358	0.11	-0.1
1,411,960	+		MPMX19_01358	0.11	-1.7
1,411,960	+		MPMX19_01358	0.11	+0.6
1,411,960	+		MPMX19_01358	0.11	-0.8
1,411,960	+		MPMX19_01358	0.11	+0.5
1,411,960	+		MPMX19_01358	0.11	-0.7
1,412,023	-		MPMX19_01358	0.18	+0.5
1,412,624	+		MPMX19_01358	0.82	-0.9
1,412,624	+		MPMX19_01358	0.82	-0.5
1,412,624	+		MPMX19_01358	0.82	+0.3
1,412,624	+		MPMX19_01358	0.82	+0.6
1,412,624	+		MPMX19_01358	0.82	+0.1
1,412,624	+		MPMX19_01358	0.82	+0.1
1,412,863	+				+0.4
1,412,863	+				-0.0
1,412,863	+				+0.4
1,412,863	+				+0.2
1,412,863	+				-1.0
1,412,863	+				-2.5
1,412,864	-				-0.7
1,412,864	-				+1.4
1,412,864	-				-0.8
1,412,864	-				+2.2
1,412,864	-				+0.5
1,412,978	+				-1.0
1,412,979	-				+1.2
1,412,979	-				+0.1
1,412,979	-				-1.4
1,412,979	-				-0.3
1,412,979	-				+0.4
1,413,068	+		MPMX19_01359	0.19	-0.4
1,413,068	+		MPMX19_01359	0.19	+0.1
1,413,068	+		MPMX19_01359	0.19	-0.7
1,413,068	+		MPMX19_01359	0.19	-0.0
1,413,068	+		MPMX19_01359	0.19	-0.6
1,413,068	+		MPMX19_01359	0.19	-0.5
1,413,068	+		MPMX19_01359	0.19	+0.8
1,413,068	+		MPMX19_01359	0.19	+0.3
1,413,068	+		MPMX19_01359	0.19	+0.4
1,413,069	-		MPMX19_01359	0.19	-0.3
1,413,069	-		MPMX19_01359	0.19	-1.1
1,413,069	-		MPMX19_01359	0.19	-0.4
1,413,069	-		MPMX19_01359	0.19	-1.5
1,413,069	-		MPMX19_01359	0.19	-0.1
1,413,069	-		MPMX19_01359	0.19	+0.3
1,413,069	-		MPMX19_01359	0.19	-0.9
1,413,069	-		MPMX19_01359	0.19	-0.9
1,413,069	-		MPMX19_01359	0.19	+0.1
1,413,069	-		MPMX19_01359	0.19	+0.7
1,413,069	-		MPMX19_01359	0.19	+0.2
1,413,116	+		MPMX19_01359	0.24	+0.2
1,413,116	+		MPMX19_01359	0.24	-1.8
1,413,116	+		MPMX19_01359	0.24	-0.9
1,413,116	+		MPMX19_01359	0.24	-0.6
1,413,117	-		MPMX19_01359	0.24	-0.3
1,413,117	-		MPMX19_01359	0.24	-2.1
1,413,117	-		MPMX19_01359	0.24	+0.8
1,413,117	-		MPMX19_01359	0.24	+0.1
1,413,117	-		MPMX19_01359	0.24	-0.1
1,413,117	-		MPMX19_01359	0.24	-0.2
1,413,117	-		MPMX19_01359	0.24	+0.8
1,413,117	-		MPMX19_01359	0.24	-0.3
1,413,117	-		MPMX19_01359	0.24	-1.9
1,413,455	+		MPMX19_01359	0.62	+1.0
1,413,455	+		MPMX19_01359	0.62	+0.7
1,413,455	+		MPMX19_01359	0.62	-1.0
1,413,455	+		MPMX19_01359	0.62	+0.2
1,413,455	+		MPMX19_01359	0.62	+0.1
1,413,455	+		MPMX19_01359	0.62	+0.6
1,413,455	+		MPMX19_01359	0.62	-1.4
1,413,455	+		MPMX19_01359	0.62	-0.7
1,413,455	+		MPMX19_01359	0.62	-1.4
1,413,456	-		MPMX19_01359	0.62	-0.8
1,413,456	-		MPMX19_01359	0.62	-0.3
1,413,456	-		MPMX19_01359	0.62	-0.5
1,413,456	-		MPMX19_01359	0.62	-1.0
1,413,456	-		MPMX19_01359	0.62	-0.4
1,413,456	-		MPMX19_01359	0.62	+0.3
1,413,456	-		MPMX19_01359	0.62	-0.5
1,413,456	-		MPMX19_01359	0.62	+0.1
1,413,456	-		MPMX19_01359	0.62	-2.1
1,413,456	-		MPMX19_01359	0.62	-0.1
1,413,456	-		MPMX19_01359	0.62	-1.2
1,413,456	-		MPMX19_01359	0.62	-0.1
1,413,456	-		MPMX19_01359	0.62	+0.1
1,413,456	-		MPMX19_01359	0.62	-0.5
1,413,456	-		MPMX19_01359	0.62	-1.7
1,413,456	-		MPMX19_01359	0.62	+0.1
1,413,456	-		MPMX19_01359	0.62	+0.2
1,413,456	-		MPMX19_01359	0.62	-0.3
1,413,456	-		MPMX19_01359	0.62	-0.4
1,413,456	-		MPMX19_01359	0.62	-1.0
1,413,786	+				-1.3
1,413,787	-				+0.4
1,413,787	-				+0.4
1,413,824	+				+0.2
1,413,824	+				+0.3
1,413,824	+				-0.5
1,413,824	+				+0.8
1,413,824	+				+0.2
1,413,824	+				-0.5
1,413,824	+				+1.0
1,413,824	+				-0.4
1,413,824	+				-0.9
1,413,824	+				-0.6
1,413,825	-				-0.6
1,413,825	-				+0.6
1,413,825	-				+0.4
1,413,825	-				-1.9
1,413,825	-				+0.8
1,413,825	-				+0.5
1,413,825	-				-2.2
1,413,825	-				-0.4
1,413,825	-				+0.3
1,413,825	-				-0.7
1,413,847	+				+0.1
1,413,847	+				-0.5
1,413,847	+				-0.0
1,413,847	+				-0.3
1,413,847	+				+0.6
1,413,847	+				-0.5
1,413,847	+				+1.0
1,413,847	+				+0.6
1,413,847	+				-0.4
1,413,847	+				-1.3
1,413,847	+				-0.9
1,413,847	+				-0.9
1,413,847	+				-0.6
1,413,847	+				-0.2
1,413,847	+				-0.2
1,413,847	+				-1.4
1,413,847	+				-0.4
1,413,847	+				-1.2
1,413,847	+				-0.4
1,413,847	+				+0.8
1,413,847	+				-0.3
1,413,847	+				+0.4
1,413,848	-				-2.4
1,413,848	-				-1.6
1,413,848	-				-1.6
1,413,848	-				+0.7
1,413,848	-				-1.7
1,413,848	-				-0.6
1,413,848	-				-0.9
1,413,848	-				+1.1
1,413,848	-				+0.4
1,413,848	-				-0.4
1,413,848	-				+0.4
1,413,848	-				+0.3
1,413,848	-				-1.1
1,413,848	-				-0.5
1,414,091	-				-0.9
1,414,091	-				+0.3
1,414,091	-				-1.0
1,414,300	+		MPMX19_01360	0.20	-0.1
1,414,300	+		MPMX19_01360	0.20	-1.3
1,414,300	+		MPMX19_01360	0.20	-0.5
1,414,300	+		MPMX19_01360	0.20	-0.2
1,414,301	-		MPMX19_01360	0.20	-0.0
1,414,301	-		MPMX19_01360	0.20	+1.4
1,414,301	-		MPMX19_01360	0.20	-0.0
1,414,301	-		MPMX19_01360	0.20	-0.9
1,414,330	+		MPMX19_01360	0.22	-0.0
1,414,330	+		MPMX19_01360	0.22	+0.9
1,414,330	+		MPMX19_01360	0.22	+0.2
1,414,330	+		MPMX19_01360	0.22	+0.6
1,414,330	+		MPMX19_01360	0.22	-1.2
1,414,330	+		MPMX19_01360	0.22	+0.4
1,414,330	+		MPMX19_01360	0.22	-0.0
1,414,331	-		MPMX19_01360	0.22	-0.5
1,414,331	-		MPMX19_01360	0.22	+0.1
1,414,331	-		MPMX19_01360	0.22	-1.8
1,414,331	-		MPMX19_01360	0.22	+0.3
1,414,331	-		MPMX19_01360	0.22	+0.1
1,414,331	-		MPMX19_01360	0.22	-0.0
1,414,504	+		MPMX19_01360	0.31	+0.4
1,414,504	+		MPMX19_01360	0.31	-0.0
1,414,504	+		MPMX19_01360	0.31	-0.9
1,414,504	+		MPMX19_01360	0.31	+1.3
1,414,504	+		MPMX19_01360	0.31	+0.3
1,414,504	+		MPMX19_01360	0.31	-0.5
1,414,504	+		MPMX19_01360	0.31	-0.4
1,414,504	+		MPMX19_01360	0.31	-0.2
1,414,504	+		MPMX19_01360	0.31	-1.7
1,414,504	+		MPMX19_01360	0.31	-1.3
1,414,504	+		MPMX19_01360	0.31	-0.5
1,414,505	-		MPMX19_01360	0.31	+0.3
1,414,505	-		MPMX19_01360	0.31	+0.4
1,414,505	-		MPMX19_01360	0.31	+0.3
1,414,505	-		MPMX19_01360	0.31	-0.7
1,414,505	-		MPMX19_01360	0.31	-1.3
1,414,505	-		MPMX19_01360	0.31	-0.3
1,414,514	-		MPMX19_01360	0.31	-0.3
1,414,514	-		MPMX19_01360	0.31	+0.3
1,414,546	+		MPMX19_01360	0.33	+0.6
1,414,546	+		MPMX19_01360	0.33	+0.9
1,414,546	+		MPMX19_01360	0.33	-1.5
1,414,546	+		MPMX19_01360	0.33	-1.6
1,414,546	+		MPMX19_01360	0.33	-1.0
1,414,546	+		MPMX19_01360	0.33	-1.0
1,414,546	+		MPMX19_01360	0.33	-1.2
1,414,547	-		MPMX19_01360	0.33	+0.8
1,414,547	-		MPMX19_01360	0.33	-0.3
1,414,547	-		MPMX19_01360	0.33	-0.2
1,414,547	-		MPMX19_01360	0.33	+0.6
1,414,547	-		MPMX19_01360	0.33	-1.5
1,414,547	-		MPMX19_01360	0.33	-0.2
1,414,547	-		MPMX19_01360	0.33	-0.0
1,414,547	-		MPMX19_01360	0.33	-0.2
1,414,684	+		MPMX19_01360	0.40	+0.6
1,414,685	-		MPMX19_01360	0.40	-0.7
1,414,685	-		MPMX19_01360	0.40	-2.3
1,414,685	-		MPMX19_01360	0.40	+0.2
1,414,685	-		MPMX19_01360	0.40	-1.3
1,414,685	-		MPMX19_01360	0.40	-2.3
1,414,685	-		MPMX19_01360	0.40	-0.9
1,414,685	-		MPMX19_01360	0.40	+1.3
1,414,714	+		MPMX19_01360	0.42	-1.7
1,414,714	+		MPMX19_01360	0.42	-0.1
1,414,714	+		MPMX19_01360	0.42	+0.5
1,414,715	-		MPMX19_01360	0.42	+0.2
1,414,715	-		MPMX19_01360	0.42	+1.2
1,414,715	-		MPMX19_01360	0.42	-0.9
1,414,765	+		MPMX19_01360	0.44	-1.2
1,414,765	+		MPMX19_01360	0.44	+0.4
1,414,765	+		MPMX19_01360	0.44	-2.3
1,414,765	+		MPMX19_01360	0.44	-0.1
1,414,765	+		MPMX19_01360	0.44	+0.6
1,414,765	+		MPMX19_01360	0.44	-1.2
1,414,765	+		MPMX19_01360	0.44	-0.0
1,414,765	+		MPMX19_01360	0.44	-0.9
1,414,765	+		MPMX19_01360	0.44	+1.6
1,414,765	+		MPMX19_01360	0.44	-0.4
1,414,765	+		MPMX19_01360	0.44	+0.1
1,414,765	+		MPMX19_01360	0.44	-0.2
1,414,765	+		MPMX19_01360	0.44	+0.3
1,414,765	+		MPMX19_01360	0.44	+1.2
1,414,765	+		MPMX19_01360	0.44	-0.3
1,414,765	+		MPMX19_01360	0.44	-0.0
1,414,765	+		MPMX19_01360	0.44	-0.7
1,414,765	+		MPMX19_01360	0.44	-0.7
1,414,765	+		MPMX19_01360	0.44	-1.1
1,414,765	+		MPMX19_01360	0.44	-0.9
1,414,765	+		MPMX19_01360	0.44	+0.2
1,414,765	+		MPMX19_01360	0.44	-0.9
1,414,765	+		MPMX19_01360	0.44	-1.9
1,414,765	+		MPMX19_01360	0.44	-1.7
1,414,765	+		MPMX19_01360	0.44	+0.2
1,414,765	+		MPMX19_01360	0.44	-2.0
1,414,765	+		MPMX19_01360	0.44	-0.4
1,414,765	+		MPMX19_01360	0.44	-1.6
1,414,765	+		MPMX19_01360	0.44	+0.6
1,414,766	-		MPMX19_01360	0.44	-0.8
1,414,766	-		MPMX19_01360	0.44	-0.4
1,414,766	-		MPMX19_01360	0.44	+0.4
1,414,766	-		MPMX19_01360	0.44	+0.4
1,414,766	-		MPMX19_01360	0.44	-1.6
1,414,766	-		MPMX19_01360	0.44	+0.1
1,414,766	-		MPMX19_01360	0.44	-0.9
1,414,766	-		MPMX19_01360	0.44	+0.3
1,414,766	-		MPMX19_01360	0.44	+0.2
1,414,766	-		MPMX19_01360	0.44	+0.3
1,414,766	-		MPMX19_01360	0.44	-1.0
1,414,766	-		MPMX19_01360	0.44	-2.1
1,414,766	-		MPMX19_01360	0.44	-1.9
1,414,766	-		MPMX19_01360	0.44	-1.4
1,414,766	-		MPMX19_01360	0.44	-0.7
1,414,766	-		MPMX19_01360	0.44	+0.6
1,414,766	-		MPMX19_01360	0.44	+0.9
1,414,766	-		MPMX19_01360	0.44	+1.1