Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01134

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,166,420	+				-0.4
1,166,420	+				-0.4
1,166,420	+				-1.5
1,166,421	-				-0.7
1,166,421	-				-0.9
1,166,468	+				-0.7
1,166,470	+				-0.1
1,166,470	+				-0.4
1,166,470	+				-0.9
1,166,470	+				-1.4
1,166,470	+				-0.9
1,166,470	+				-0.2
1,166,470	+				-1.2
1,166,470	+				+0.1
1,166,471	-				-0.7
1,166,471	-				-1.5
1,166,471	-				-1.3
1,166,471	-				+0.5
1,166,471	-				+0.7
1,166,471	-				-0.1
1,166,471	-				-1.6
1,166,471	-				-0.4
1,166,471	-				-0.8
1,166,471	-				+0.8
1,166,471	-				+0.4
1,166,557	+		MPMX19_01133	0.19	+0.2
1,166,557	+		MPMX19_01133	0.19	+0.3
1,166,557	+		MPMX19_01133	0.19	-1.7
1,166,557	+		MPMX19_01133	0.19	+0.3
1,166,558	-		MPMX19_01133	0.19	+0.6
1,166,558	-		MPMX19_01133	0.19	+0.0
1,166,558	-		MPMX19_01133	0.19	-0.6
1,166,558	-		MPMX19_01133	0.19	+0.2
1,166,770	+		MPMX19_01133	0.43	-1.1
1,166,770	+		MPMX19_01133	0.43	-1.2
1,166,771	-		MPMX19_01133	0.43	-2.1
1,166,878	+		MPMX19_01133	0.55	+0.7
1,166,878	+		MPMX19_01133	0.55	-0.2
1,166,878	+		MPMX19_01133	0.55	+0.1
1,166,878	+		MPMX19_01133	0.55	-0.3
1,166,878	+		MPMX19_01133	0.55	-1.8
1,166,878	+		MPMX19_01133	0.55	-0.7
1,166,878	+		MPMX19_01133	0.55	+0.6
1,166,878	+		MPMX19_01133	0.55	-0.9
1,166,879	-		MPMX19_01133	0.55	-0.2
1,166,879	-		MPMX19_01133	0.55	-0.9
1,166,879	-		MPMX19_01133	0.55	-0.4
1,166,879	-		MPMX19_01133	0.55	-1.0
1,166,879	-		MPMX19_01133	0.55	+0.4
1,166,879	-		MPMX19_01133	0.55	+0.3
1,166,879	-		MPMX19_01133	0.55	+0.0
1,166,879	-		MPMX19_01133	0.55	+0.9
1,166,879	-		MPMX19_01133	0.55	+0.0
1,166,879	-		MPMX19_01133	0.55	-0.7
1,166,879	-		MPMX19_01133	0.55	-1.1
1,167,088	+		MPMX19_01133	0.78	+0.2
1,167,088	+		MPMX19_01133	0.78	+0.0
1,167,305	+				-2.0
1,167,305	+				-0.5
1,167,306	-				-0.7
1,167,306	-				-0.6
1,167,346	+				-1.0
1,167,347	-				-0.6
1,167,347	-				-0.3
1,167,365	-				-1.1
1,167,454	+				-0.1
1,167,454	+				+1.3
1,167,455	-				-1.7
1,167,455	-				-0.7
1,167,455	-				+0.0
1,167,455	-				+0.6
1,167,455	-				-0.3
1,167,503	+				-1.0
1,167,504	-				+1.9
1,167,556	+		MPMX19_01134	0.12	+0.2
1,167,556	+		MPMX19_01134	0.12	+1.0
1,167,556	+		MPMX19_01134	0.12	-0.5
1,167,556	+		MPMX19_01134	0.12	+0.7
1,167,556	+		MPMX19_01134	0.12	+0.6
1,167,556	+		MPMX19_01134	0.12	-0.9
1,167,556	+		MPMX19_01134	0.12	-1.2
1,167,556	+		MPMX19_01134	0.12	+0.0
1,167,556	+		MPMX19_01134	0.12	-0.6
1,167,557	-		MPMX19_01134	0.12	-0.2
1,167,557	-		MPMX19_01134	0.12	+0.9
1,167,557	-		MPMX19_01134	0.12	+0.0
1,167,557	-		MPMX19_01134	0.12	+0.1
1,167,557	-		MPMX19_01134	0.12	-0.4
1,167,557	-		MPMX19_01134	0.12	+0.2
1,167,557	-		MPMX19_01134	0.12	+0.9
1,167,688	+		MPMX19_01134	0.23	+0.0
1,167,688	+		MPMX19_01134	0.23	-1.1
1,167,688	+		MPMX19_01134	0.23	-1.0
1,167,688	+		MPMX19_01134	0.23	-0.6
1,167,688	+		MPMX19_01134	0.23	-0.6
1,167,688	+		MPMX19_01134	0.23	-0.3
1,167,688	+		MPMX19_01134	0.23	+0.3
1,167,688	+		MPMX19_01134	0.23	-1.4
1,167,688	+		MPMX19_01134	0.23	+0.6
1,167,689	-		MPMX19_01134	0.23	-0.4
1,167,689	-		MPMX19_01134	0.23	+1.2
1,167,689	-		MPMX19_01134	0.23	+0.4
1,167,689	-		MPMX19_01134	0.23	+0.6
1,167,689	-		MPMX19_01134	0.23	-0.8
1,167,689	-		MPMX19_01134	0.23	+0.1
1,167,689	-		MPMX19_01134	0.23	-0.9
1,167,689	-		MPMX19_01134	0.23	-0.7
1,167,689	-		MPMX19_01134	0.23	-0.3
1,167,689	-		MPMX19_01134	0.23	-0.2
1,167,689	-		MPMX19_01134	0.23	-1.2
1,167,689	-		MPMX19_01134	0.23	-1.2
1,168,054	+		MPMX19_01134	0.53	-0.6
1,168,055	-		MPMX19_01134	0.53	-1.0
1,168,150	+		MPMX19_01134	0.61	-2.0
1,168,150	+		MPMX19_01134	0.61	-1.2
1,168,150	+		MPMX19_01134	0.61	-1.7
1,168,150	+		MPMX19_01134	0.61	+0.4
1,168,150	+		MPMX19_01134	0.61	-0.7
1,168,150	+		MPMX19_01134	0.61	-2.5
1,168,150	+		MPMX19_01134	0.61	-1.2
1,168,151	-		MPMX19_01134	0.61	-0.3
1,168,151	-		MPMX19_01134	0.61	-0.2
1,168,151	-		MPMX19_01134	0.61	-0.9
1,168,151	-		MPMX19_01134	0.61	-0.3
1,168,151	-		MPMX19_01134	0.61	-0.2
1,168,354	+		MPMX19_01134	0.78	-1.6
1,168,354	+		MPMX19_01134	0.78	+0.1
1,168,354	+		MPMX19_01134	0.78	-0.7
1,168,354	+		MPMX19_01134	0.78	-0.7
1,168,354	+		MPMX19_01134	0.78	-0.5
1,168,354	+		MPMX19_01134	0.78	-0.1
1,168,354	+		MPMX19_01134	0.78	+0.3
1,168,354	+		MPMX19_01134	0.78	+0.0
1,168,354	+		MPMX19_01134	0.78	+0.3
1,168,354	+		MPMX19_01134	0.78	-0.6
1,168,354	+		MPMX19_01134	0.78	+0.4
1,168,354	+		MPMX19_01134	0.78	-1.9
1,168,354	+		MPMX19_01134	0.78	+0.2
1,168,354	+		MPMX19_01134	0.78	-1.7
1,168,354	+		MPMX19_01134	0.78	-2.5
1,168,354	+		MPMX19_01134	0.78	-1.2
1,168,354	+		MPMX19_01134	0.78	-0.4
1,168,354	+		MPMX19_01134	0.78	-1.4
1,168,354	+		MPMX19_01134	0.78	+0.4
1,168,355	-		MPMX19_01134	0.78	-0.6
1,168,355	-		MPMX19_01134	0.78	-0.3
1,168,355	-		MPMX19_01134	0.78	-0.3
1,168,355	-		MPMX19_01134	0.78	+0.0
1,168,355	-		MPMX19_01134	0.78	+0.0
1,168,355	-		MPMX19_01134	0.78	-1.7
1,168,355	-		MPMX19_01134	0.78	-0.7
1,168,355	-		MPMX19_01134	0.78	+0.1
1,168,355	-		MPMX19_01134	0.78	-1.0
1,168,355	-		MPMX19_01134	0.78	-1.1
1,168,355	-		MPMX19_01134	0.78	-0.4
1,168,355	-		MPMX19_01134	0.78	-1.0
1,168,355	-		MPMX19_01134	0.78	-0.1
1,168,355	-		MPMX19_01134	0.78	-1.1
1,168,355	-		MPMX19_01134	0.78	-0.1
1,168,355	-		MPMX19_01134	0.78	+0.6
1,168,355	-		MPMX19_01134	0.78	-0.7
1,168,355	-		MPMX19_01134	0.78	-0.7
1,168,355	-		MPMX19_01134	0.78	+0.0
1,168,355	-		MPMX19_01134	0.78	+1.4
1,168,863	+		MPMX19_01135	0.32	-0.7
1,168,863	+		MPMX19_01135	0.32	-0.3
1,168,863	+		MPMX19_01135	0.32	+0.2
1,168,863	+		MPMX19_01135	0.32	+0.1
1,168,863	+		MPMX19_01135	0.32	-0.4
1,168,864	-		MPMX19_01135	0.32	-0.9
1,168,864	-		MPMX19_01135	0.32	-0.3
1,168,864	-		MPMX19_01135	0.32	-2.1
1,168,865	+		MPMX19_01135	0.32	-2.2
1,168,865	+		MPMX19_01135	0.32	-0.4
1,168,865	+		MPMX19_01135	0.32	-1.2
1,168,865	+		MPMX19_01135	0.32	-0.1
1,168,865	+		MPMX19_01135	0.32	-1.0
1,168,865	+		MPMX19_01135	0.32	-1.0
1,168,865	+		MPMX19_01135	0.32	-1.9
1,168,865	+		MPMX19_01135	0.32	-1.3
1,168,865	+		MPMX19_01135	0.32	-0.9
1,168,865	+		MPMX19_01135	0.32	-0.7
1,168,865	+		MPMX19_01135	0.32	-0.5
1,168,865	+		MPMX19_01135	0.32	-0.7
1,168,865	+		MPMX19_01135	0.32	-2.0
1,168,865	+		MPMX19_01135	0.32	+0.4
1,168,865	+		MPMX19_01135	0.32	-1.4
1,168,865	+		MPMX19_01135	0.32	-0.5
1,168,865	+		MPMX19_01135	0.32	-0.2
1,168,865	+		MPMX19_01135	0.32	-0.4
1,168,865	+		MPMX19_01135	0.32	-0.5
1,168,865	+		MPMX19_01135	0.32	+0.4
1,168,865	+		MPMX19_01135	0.32	-1.0
1,168,865	+		MPMX19_01135	0.32	+0.6
1,168,865	+		MPMX19_01135	0.32	-0.9
1,168,866	-		MPMX19_01135	0.32	-1.0
1,168,866	-		MPMX19_01135	0.32	+0.9
1,168,866	-		MPMX19_01135	0.32	-1.4
1,168,866	-		MPMX19_01135	0.32	-0.1
1,168,866	-		MPMX19_01135	0.32	-0.9
1,168,866	-		MPMX19_01135	0.32	-1.7
1,168,866	-		MPMX19_01135	0.32	-2.6
1,168,866	-		MPMX19_01135	0.32	-0.4
1,168,866	-		MPMX19_01135	0.32	-0.4
1,168,866	-		MPMX19_01135	0.32	+0.7
1,168,866	-		MPMX19_01135	0.32	-2.1
1,168,866	-		MPMX19_01135	0.32	-0.7
1,168,866	-		MPMX19_01135	0.32	+0.0
1,168,866	-		MPMX19_01135	0.32	-1.2
1,168,866	-		MPMX19_01135	0.32	-0.9
1,168,866	-		MPMX19_01135	0.32	-0.5
1,168,944	+		MPMX19_01135	0.42	-0.9
1,168,944	+		MPMX19_01135	0.42	-0.6
1,168,944	+		MPMX19_01135	0.42	+1.6
1,168,944	+		MPMX19_01135	0.42	+0.3
1,168,944	+		MPMX19_01135	0.42	-0.8
1,168,944	+		MPMX19_01135	0.42	-2.0
1,168,944	+		MPMX19_01135	0.42	-1.0
1,168,944	+		MPMX19_01135	0.42	-1.4
1,168,944	+		MPMX19_01135	0.42	+0.3
1,168,945	-		MPMX19_01135	0.42	-0.7
1,168,945	-		MPMX19_01135	0.42	-0.4
1,168,945	-		MPMX19_01135	0.42	-0.5
1,168,945	-		MPMX19_01135	0.42	-0.1
1,168,945	-		MPMX19_01135	0.42	-1.2
1,168,945	-		MPMX19_01135	0.42	-1.0
1,168,945	-		MPMX19_01135	0.42	+0.6
1,168,945	-		MPMX19_01135	0.42	-1.4
1,168,945	-		MPMX19_01135	0.42	-1.2
1,168,945	-		MPMX19_01135	0.42	+1.4
1,169,211	-		MPMX19_01135	0.77	-1.0
1,169,327	+				+2.2
1,169,327	+				+0.4
1,169,327	+				+0.8
1,169,327	+				+0.6
1,169,327	+				-0.3
1,169,327	+				+1.5
1,169,327	+				+0.3
1,169,327	+				-0.9
1,169,327	+				+0.3
1,169,327	+				+0.2
1,169,327	+				-1.1
1,169,327	+				-0.1
1,169,327	+				-2.2
1,169,327	+				+0.0
1,169,327	+				-0.7
1,169,327	+				+0.7
1,169,327	+				-0.1
1,169,327	+				-0.5
1,169,327	+				+0.8
1,169,327	+				-0.1
1,169,327	+				+0.1
1,169,327	+				+0.9
1,169,327	+				+1.6
1,169,327	+				-0.2
1,169,327	+				-0.8
1,169,327	+				-1.7
1,169,327	+				-1.1
1,169,327	+				+1.0
1,169,327	+				+0.0
1,169,327	+				+0.9
1,169,327	+				+0.3
1,169,327	+				+0.3
1,169,327	+				+0.1
1,169,327	+				-0.7
1,169,327	+				+0.1
1,169,327	+				+0.2
1,169,327	+				-0.5
1,169,327	+				-0.6
1,169,327	+				+0.5
1,169,327	+				-1.2
1,169,327	+				+0.3
1,169,327	+				-0.7
1,169,327	+				-0.1
1,169,327	+				+0.4
1,169,327	+				-0.3
1,169,328	-				+0.3
1,169,328	-				-0.3
1,169,328	-				-0.7
1,169,328	-				+0.1
1,169,328	-				+0.8
1,169,328	-				-0.6
1,169,328	-				-0.3
1,169,328	-				+1.2
1,169,328	-				+0.5
1,169,328	-				-1.9
1,169,328	-				+0.6
1,169,328	-				-1.6
1,169,328	-				-0.7
1,169,328	-				-0.3
1,169,328	-				-0.1
1,169,328	-				-1.2
1,169,328	-				+0.3
1,169,328	-				+0.6
1,169,328	-				-1.0
1,169,328	-				-1.2
1,169,328	-				-0.4
1,169,328	-				-0.3
1,169,328	-				-0.0
1,169,328	-				-0.5
1,169,328	-				-0.2
1,169,328	-				-0.9
1,169,328	-				-0.2
1,169,328	-				-0.8
1,169,328	-				-0.9
1,169,328	-				+0.3
1,169,328	-				-1.2
1,169,328	-				-1.6
1,169,328	-				-0.6
1,169,328	-				-1.7
1,169,328	-				-1.9
1,169,328	-				+0.0
1,169,328	-				+0.6
1,169,328	-				+0.1
1,169,328	-				+0.7
1,169,328	-				+0.2
1,169,328	-				+0.1
1,169,328	-				-0.3
1,169,328	-				+0.0
1,169,328	-				+0.4
1,169,328	-				-1.5
1,169,328	-				+0.4
1,169,328	-				-0.8
1,169,348	+				+1.4
1,169,348	+				-0.1
1,169,348	+				-0.3
1,169,348	+				-1.5
1,169,349	-				+0.5
1,169,349	-				+0.7
1,169,349	-				-0.8
1,169,349	-				+1.6
1,169,461	+				+0.0
1,169,469	+				-0.6
1,169,469	+				-0.7
1,169,469	+				+0.3
1,169,470	-				-0.2
1,169,470	-				+0.0
1,169,470	-				-2.3
1,169,471	+				-0.2
1,169,471	+				-0.2
1,169,471	+				+0.0
1,169,471	+				-0.2
1,169,471	+				+0.5
1,169,471	+				+1.2
1,169,471	+				+0.6
1,169,471	+				-0.7
1,169,471	+				+0.6
1,169,471	+				-1.1
1,169,471	+				-2.0
1,169,471	+				-1.3
1,169,471	+				+1.0
1,169,471	+				-0.4
1,169,471	+				+0.3
1,169,472	-				+0.6
1,169,472	-				-0.1
1,169,472	-				+1.3
1,169,472	-				-0.1
1,169,472	-				-0.8