Strain Fitness in Methylophilus sp. DMC18 around GFF901

Experiment: D-Glucose and Methanol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose and Methanol (C)
136,480	-				-1.3
136,480	-				-1.8
136,491	+				-0.0
136,512	+				-0.1
136,512	+				-0.6
136,512	+				+0.9
136,513	-				-1.1
136,513	-				+0.9
136,555	+				-0.1
136,556	-				-0.7
136,556	-				-0.4
136,579	+		GFF900	0.11	+0.3
136,579	+		GFF900	0.11	-0.1
136,579	+		GFF900	0.11	-0.1
136,580	-		GFF900	0.11	+0.5
136,580	-		GFF900	0.11	-2.1
136,580	-		GFF900	0.11	+0.2
136,580	-		GFF900	0.11	-0.1
136,580	-		GFF900	0.11	+0.3
136,580	-		GFF900	0.11	-0.1
136,580	-		GFF900	0.11	-1.4
136,583	+		GFF900	0.11	-0.7
136,631	+		GFF900	0.17	-1.7
136,632	-		GFF900	0.17	-1.4
136,657	-		GFF900	0.21	-0.4
136,657	-		GFF900	0.21	+1.2
136,657	-		GFF900	0.21	-0.3
136,685	+		GFF900	0.24	-0.3
136,772	-		GFF900	0.35	+0.1
136,790	+		GFF900	0.37	-1.1
136,790	+		GFF900	0.37	-1.5
136,790	+		GFF900	0.37	-1.2
136,790	+		GFF900	0.37	-0.5
136,791	-		GFF900	0.37	-1.4
136,794	+		GFF900	0.37	-2.1
136,794	+		GFF900	0.37	-0.1
136,794	+		GFF900	0.37	-1.9
136,795	-		GFF900	0.38	-1.2
136,795	-		GFF900	0.38	-0.1
136,826	+		GFF900	0.41	-0.5
136,826	+		GFF900	0.41	-0.1
136,827	-		GFF900	0.41	+0.6
136,827	-		GFF900	0.41	-1.1
136,827	-		GFF900	0.41	-1.1
136,827	-		GFF900	0.41	-1.4
136,827	-		GFF900	0.41	+0.2
136,827	-		GFF900	0.41	-1.5
136,830	+		GFF900	0.42	-0.1
136,830	+		GFF900	0.42	-1.5
136,830	+		GFF900	0.42	-1.1
136,830	+		GFF900	0.42	-0.4
136,830	+		GFF900	0.42	-1.0
136,830	+		GFF900	0.42	-0.4
136,830	+		GFF900	0.42	-0.7
136,831	-		GFF900	0.42	-2.0
136,831	-		GFF900	0.42	-0.1
136,831	-		GFF900	0.42	-0.4
136,831	-		GFF900	0.42	-1.4
136,831	-		GFF900	0.42	-2.6
136,831	-		GFF900	0.42	-0.4
136,831	-		GFF900	0.42	+0.3
136,843	+		GFF900	0.43	-0.1
136,844	-		GFF900	0.44	+0.1
136,844	-		GFF900	0.44	-0.6
136,844	-		GFF900	0.44	-0.7
136,844	-		GFF900	0.44	-0.1
136,844	-		GFF900	0.44	-1.4
136,844	-		GFF900	0.44	-1.4
136,844	-		GFF900	0.44	+0.3
136,844	-		GFF900	0.44	-0.5
136,902	-		GFF900	0.51	-1.5
136,974	+		GFF900	0.60	-1.3
136,974	+		GFF900	0.60	-1.1
136,974	+		GFF900	0.60	-1.1
136,974	+		GFF900	0.60	-0.2
136,974	+		GFF900	0.60	-1.1
136,975	-		GFF900	0.60	+0.5
136,975	-		GFF900	0.60	+0.1
136,975	-		GFF900	0.60	-0.9
136,975	-		GFF900	0.60	-0.4
136,975	-		GFF900	0.60	+0.0
137,150	-		GFF900	0.81	-1.1
137,151	+		GFF900	0.81	-0.1
137,151	+		GFF900	0.81	+0.2
137,151	+		GFF900	0.81	+0.9
137,152	-		GFF900	0.81	+0.2
137,171	-		GFF900	0.84	-0.4
137,207	-		GFF900	0.88	-0.7
137,214	-		GFF900	0.89	-1.4
137,214	-		GFF900	0.89	-0.7
137,227	+				-0.6
137,228	-				-0.6
137,290	+				-0.8
137,291	-				+0.2
137,331	+				-0.3
137,331	+				-0.7
137,332	-				+0.2
137,332	-				-0.1
137,332	-				-1.7
137,332	-				-2.4
137,332	-				+0.1
137,332	-				+0.0
137,332	-				+0.1
137,332	-				-0.7
137,354	+				-0.1
137,354	+				-1.7
137,355	-				+0.3
137,440	+				-1.5
137,440	+				-1.8
137,440	+				-0.4
137,440	+				-1.4
137,440	+				-0.1
137,441	-				-0.5
137,441	-				-0.2
137,441	-				+0.9
137,441	-				-0.8
137,441	-				-0.2
137,444	+				-1.2
137,444	+				-0.5
137,445	-				-1.1
137,481	-				-2.7
137,481	-				-0.4
137,486	+				-1.4
137,486	+				-1.1
137,487	-				-1.1
137,487	-				-1.9
137,487	-				-0.9
137,504	+				-2.7
137,522	-				-1.7
137,540	-				-1.2
137,540	-				-0.1
137,540	-				-0.1
137,543	+				-1.9
137,701	+		GFF901	0.13	-0.9
137,701	+		GFF901	0.13	-0.1
137,702	-		GFF901	0.13	-0.5
137,702	-		GFF901	0.13	-0.7
137,703	+		GFF901	0.13	-0.9
137,703	+		GFF901	0.13	-1.2
137,784	+		GFF901	0.17	-0.7
137,829	-		GFF901	0.20	-0.3
137,848	+		GFF901	0.21	-2.1
137,848	+		GFF901	0.21	-2.1
137,848	+		GFF901	0.21	-1.1
137,849	-		GFF901	0.21	-1.3
137,849	-		GFF901	0.21	-1.4
137,852	+		GFF901	0.21	-1.2
137,853	-		GFF901	0.21	-0.2
137,890	+		GFF901	0.23	-1.2
137,890	+		GFF901	0.23	-0.3
137,891	-		GFF901	0.23	-2.2
137,985	+		GFF901	0.28	-2.3
137,986	-		GFF901	0.28	-0.1
137,996	-		GFF901	0.29	-1.7
138,048	-		GFF901	0.31	-1.1
138,048	-		GFF901	0.31	-2.4
138,291	-		GFF901	0.44	-1.4
138,315	+		GFF901	0.45	-1.9
138,315	+		GFF901	0.45	-1.7
138,316	-		GFF901	0.45	+0.2
138,495	+		GFF901	0.55	-1.4
138,496	-		GFF901	0.55	-0.7
138,532	+		GFF901	0.57	-0.4
138,532	+		GFF901	0.57	-1.2
138,552	+		GFF901	0.58	-1.7
138,552	+		GFF901	0.58	-1.1
138,553	-		GFF901	0.58	-0.7
138,633	+		GFF901	0.62	-1.4
138,633	+		GFF901	0.62	-0.4
138,634	-		GFF901	0.62	-1.1
138,723	+		GFF901	0.67	-1.2
138,723	+		GFF901	0.67	-0.7
138,723	+		GFF901	0.67	-3.7
138,723	+		GFF901	0.67	+0.2
138,724	-		GFF901	0.67	-1.1
138,724	-		GFF901	0.67	-0.1
138,789	-		GFF901	0.71	-1.5
138,792	-		GFF901	0.71	-0.4
138,815	-		GFF901	0.72	-1.1
138,815	-		GFF901	0.72	-0.4
138,815	-		GFF901	0.72	-2.4
138,869	+		GFF901	0.75	-1.0
138,869	+		GFF901	0.75	-1.1
138,870	-		GFF901	0.75	-1.7
138,870	-		GFF901	0.75	-1.1
138,870	-		GFF901	0.75	-2.1
138,870	-		GFF901	0.75	-1.4
138,889	+		GFF901	0.76	-1.7
138,889	+		GFF901	0.76	-0.4
138,890	-		GFF901	0.76	-1.7
138,908	-		GFF901	0.77	-0.7
138,987	+		GFF901	0.81	-2.1
138,988	-		GFF901	0.81	+0.0
138,994	+		GFF901	0.81	-0.7
138,995	-		GFF901	0.82	+0.5
139,014	-		GFF901	0.83	-1.3
139,030	+		GFF901	0.83	-0.9
139,057	-		GFF901	0.85	-1.4
139,073	+		GFF901	0.86	-1.1
139,073	+		GFF901	0.86	-0.4
139,073	+		GFF901	0.86	-1.1
139,074	-		GFF901	0.86	-1.1
139,120	+		GFF901	0.88	-1.1
139,131	+		GFF901	0.89	-0.1
139,131	+		GFF901	0.89	-1.9
139,132	-		GFF901	0.89	-1.4
139,132	-		GFF901	0.89	-1.7
139,132	-		GFF901	0.89	-0.9
139,186	-				-1.1
139,249	-				+0.3
139,249	-				-1.2
139,287	-				-1.2
139,307	-				-0.1
139,333	+				-1.1
139,333	+				-1.5
139,333	+				-0.7
139,334	-				-1.3
139,355	+				-1.1
139,355	+				-1.7
139,355	+				-1.7
139,355	+				-2.4
139,428	+				-1.4
139,429	-				+0.2
139,446	+				+0.1
139,446	+				-1.0
139,447	-				-0.9
139,467	-				-1.9
139,596	-		GFF902	0.11	-0.8
139,649	+		GFF902	0.15	+0.5
139,650	-		GFF902	0.15	-0.3
139,675	+		GFF902	0.17	-1.6
139,675	+		GFF902	0.17	+0.3
139,778	+		GFF902	0.26	+0.4
139,779	-		GFF902	0.26	-1.4
139,779	-		GFF902	0.26	+0.5
139,834	+		GFF902	0.30	-1.7
139,834	+		GFF902	0.30	-0.2
139,834	+		GFF902	0.30	+0.3
139,835	-		GFF902	0.30	-1.9
139,841	-		GFF902	0.31	+0.2
140,022	+		GFF902	0.46	+0.3
140,023	-		GFF902	0.46	-0.2
140,023	-		GFF902	0.46	-0.5
140,023	-		GFF902	0.46	-1.1
140,032	+		GFF902	0.47	+0.5
140,032	+		GFF902	0.47	-0.7
140,033	-		GFF902	0.47	-1.2
140,033	-		GFF902	0.47	+0.2
140,033	-		GFF902	0.47	-0.2
140,033	-		GFF902	0.47	-0.7
140,041	+		GFF902	0.47	-0.3
140,041	+		GFF902	0.47	+0.3
140,041	+		GFF902	0.47	-1.7
140,041	+		GFF902	0.47	-0.2
140,042	-		GFF902	0.47	-0.2
140,042	-		GFF902	0.47	+0.1
140,074	-		GFF902	0.50	-1.1
140,278	-		GFF902	0.67	-0.4
140,309	-		GFF902	0.69	-0.5
140,309	-		GFF902	0.69	-0.9
140,330	+		GFF902	0.71	-1.4
140,330	+		GFF902	0.71	+0.0
140,330	+		GFF902	0.71	-2.1
140,331	-		GFF902	0.71	-1.1
140,331	-		GFF902	0.71	-1.1
140,331	-		GFF902	0.71	-0.5
140,331	-		GFF902	0.71	-1.0
140,331	-		GFF902	0.71	-0.0
140,339	+		GFF902	0.72	-0.2
140,339	+		GFF902	0.72	-1.1