Experiment: D-Glucose and Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF391 and GFF392 are separated by 80 nucleotides GFF392 and GFF393 are separated by 171 nucleotides GFF393 and GFF394 are separated by 246 nucleotides
GFF391 - Sulfate-binding protein, at 434,391 to 435,398
GFF391
GFF392 - hypothetical protein, at 435,479 to 435,757
GFF392
GFF393 - hypothetical protein, at 435,929 to 437,581
GFF393
GFF394 - hypothetical protein, at 437,828 to 439,459
GFF394
Position (kb) 435
436
437
438 Strain fitness (log2 ratio) -2
-1
0
1 at 434.971 kb on + strand, within GFF391 at 434.972 kb on - strand, within GFF391 at 434.975 kb on + strand, within GFF391 at 435.113 kb on + strand, within GFF391 at 435.114 kb on - strand, within GFF391 at 435.139 kb on + strand, within GFF391 at 435.140 kb on - strand, within GFF391 at 435.204 kb on + strand, within GFF391 at 435.205 kb on - strand, within GFF391 at 435.205 kb on - strand, within GFF391 at 435.240 kb on + strand, within GFF391 at 435.241 kb on - strand, within GFF391 at 435.397 kb on - strand at 435.397 kb on - strand at 435.397 kb on - strand at 435.397 kb on - strand at 435.397 kb on - strand at 435.461 kb on - strand at 435.554 kb on - strand, within GFF392 at 435.604 kb on - strand, within GFF392 at 435.610 kb on + strand, within GFF392 at 435.663 kb on - strand, within GFF392 at 435.686 kb on - strand, within GFF392 at 435.686 kb on - strand, within GFF392 at 435.708 kb on - strand, within GFF392 at 435.745 kb on - strand at 435.745 kb on - strand at 435.794 kb on - strand at 435.794 kb on - strand at 435.813 kb on + strand at 435.813 kb on + strand at 435.813 kb on + strand at 435.813 kb on + strand at 435.813 kb on + strand at 435.814 kb on - strand at 435.814 kb on - strand at 435.814 kb on - strand at 435.814 kb on - strand at 435.814 kb on - strand at 435.814 kb on - strand at 435.815 kb on + strand at 435.815 kb on + strand at 435.815 kb on + strand at 435.824 kb on + strand at 435.851 kb on - strand at 435.857 kb on + strand at 435.857 kb on + strand at 435.858 kb on - strand at 435.994 kb on + strand at 435.994 kb on + strand at 436.020 kb on + strand at 436.031 kb on - strand at 436.071 kb on + strand at 436.071 kb on + strand at 436.085 kb on + strand at 436.085 kb on + strand at 436.085 kb on + strand at 436.085 kb on + strand at 436.086 kb on - strand at 436.098 kb on + strand, within GFF393 at 436.099 kb on - strand, within GFF393 at 436.099 kb on - strand, within GFF393 at 436.099 kb on - strand, within GFF393 at 436.099 kb on - strand, within GFF393 at 436.102 kb on + strand, within GFF393 at 436.102 kb on + strand, within GFF393 at 436.102 kb on + strand, within GFF393 at 436.103 kb on - strand, within GFF393 at 436.108 kb on + strand, within GFF393 at 436.108 kb on + strand, within GFF393 at 436.108 kb on + strand, within GFF393 at 436.133 kb on + strand, within GFF393 at 436.157 kb on + strand, within GFF393 at 436.158 kb on - strand, within GFF393 at 436.158 kb on - strand, within GFF393 at 436.158 kb on - strand, within GFF393 at 436.158 kb on - strand, within GFF393 at 436.250 kb on + strand, within GFF393 at 436.250 kb on + strand, within GFF393 at 436.250 kb on + strand, within GFF393 at 436.251 kb on - strand, within GFF393 at 436.324 kb on + strand, within GFF393 at 436.325 kb on - strand, within GFF393 at 436.325 kb on - strand, within GFF393 at 436.336 kb on + strand, within GFF393 at 436.397 kb on + strand, within GFF393 at 436.397 kb on + strand, within GFF393 at 436.398 kb on - strand, within GFF393 at 436.398 kb on - strand, within GFF393 at 436.398 kb on - strand, within GFF393 at 436.398 kb on - strand, within GFF393 at 436.458 kb on + strand, within GFF393 at 436.459 kb on - strand, within GFF393 at 436.459 kb on - strand, within GFF393 at 436.487 kb on + strand, within GFF393 at 436.621 kb on + strand, within GFF393 at 436.621 kb on - strand, within GFF393 at 436.632 kb on + strand, within GFF393 at 436.632 kb on + strand, within GFF393 at 436.636 kb on + strand, within GFF393 at 436.636 kb on + strand, within GFF393 at 436.636 kb on + strand, within GFF393 at 436.684 kb on + strand, within GFF393 at 436.685 kb on - strand, within GFF393 at 436.733 kb on + strand, within GFF393 at 436.733 kb on + strand, within GFF393 at 436.733 kb on + strand, within GFF393 at 436.733 kb on + strand, within GFF393 at 436.733 kb on + strand, within GFF393 at 436.734 kb on - strand, within GFF393 at 436.735 kb on + strand, within GFF393 at 436.751 kb on + strand, within GFF393 at 436.751 kb on + strand, within GFF393 at 436.751 kb on + strand, within GFF393 at 436.751 kb on + strand, within GFF393 at 436.752 kb on - strand, within GFF393 at 436.752 kb on - strand, within GFF393 at 436.752 kb on - strand, within GFF393 at 436.752 kb on - strand, within GFF393 at 436.752 kb on - strand, within GFF393 at 436.752 kb on - strand, within GFF393 at 436.752 kb on - strand, within GFF393 at 436.754 kb on + strand, within GFF393 at 436.754 kb on + strand, within GFF393 at 436.755 kb on - strand, within GFF393 at 436.755 kb on - strand, within GFF393 at 436.755 kb on - strand, within GFF393 at 436.755 kb on - strand, within GFF393 at 436.856 kb on + strand, within GFF393 at 436.857 kb on - strand, within GFF393 at 436.857 kb on - strand, within GFF393 at 436.857 kb on - strand, within GFF393 at 436.857 kb on - strand, within GFF393 at 436.908 kb on + strand, within GFF393 at 436.909 kb on - strand, within GFF393 at 436.940 kb on - strand, within GFF393 at 437.067 kb on + strand, within GFF393 at 437.067 kb on + strand, within GFF393 at 437.101 kb on + strand, within GFF393 at 437.101 kb on + strand, within GFF393 at 437.101 kb on + strand, within GFF393 at 437.101 kb on + strand, within GFF393 at 437.102 kb on - strand, within GFF393 at 437.102 kb on - strand, within GFF393 at 437.102 kb on - strand, within GFF393 at 437.102 kb on - strand, within GFF393 at 437.102 kb on - strand, within GFF393 at 437.102 kb on - strand, within GFF393 at 437.118 kb on + strand, within GFF393 at 437.119 kb on - strand, within GFF393 at 437.286 kb on - strand, within GFF393 at 437.300 kb on + strand, within GFF393 at 437.301 kb on - strand, within GFF393 at 437.312 kb on - strand, within GFF393 at 437.334 kb on + strand, within GFF393 at 437.335 kb on - strand, within GFF393 at 437.372 kb on - strand, within GFF393 at 437.431 kb on + strand at 437.446 kb on - strand at 437.446 kb on - strand at 437.491 kb on + strand at 437.491 kb on + strand at 437.511 kb on - strand at 437.701 kb on + strand at 437.735 kb on - strand at 437.748 kb on - strand at 437.751 kb on + strand at 437.804 kb on + strand at 437.804 kb on + strand at 437.804 kb on + strand at 437.804 kb on + strand at 437.805 kb on - strand at 437.828 kb on - strand at 437.828 kb on - strand at 437.828 kb on - strand at 437.828 kb on - strand at 437.828 kb on - strand at 437.889 kb on + strand at 437.889 kb on + strand at 437.889 kb on + strand at 437.889 kb on + strand at 437.889 kb on + strand at 437.890 kb on - strand at 437.890 kb on - strand at 437.890 kb on - strand at 437.890 kb on - strand at 437.890 kb on - strand at 437.890 kb on - strand at 437.890 kb on - strand at 437.890 kb on - strand at 437.891 kb on + strand at 437.891 kb on + strand at 437.891 kb on + strand at 437.891 kb on + strand at 437.891 kb on + strand at 437.891 kb on + strand at 437.892 kb on - strand at 437.892 kb on - strand at 437.892 kb on - strand at 437.892 kb on - strand at 437.892 kb on - strand at 437.892 kb on - strand at 437.893 kb on + strand at 437.893 kb on + strand at 437.893 kb on + strand at 437.893 kb on + strand at 437.893 kb on + strand at 437.893 kb on + strand at 437.894 kb on - strand at 437.894 kb on - strand at 437.911 kb on - strand at 437.953 kb on + strand at 437.954 kb on - strand at 437.991 kb on + strand at 437.992 kb on - strand, within GFF394 at 438.032 kb on + strand, within GFF394 at 438.033 kb on - strand, within GFF394 at 438.043 kb on + strand, within GFF394 at 438.144 kb on - strand, within GFF394 at 438.218 kb on - strand, within GFF394 at 438.313 kb on + strand, within GFF394 at 438.357 kb on - strand, within GFF394 at 438.361 kb on + strand, within GFF394 at 438.362 kb on - strand, within GFF394 at 438.401 kb on - strand, within GFF394 at 438.465 kb on - strand, within GFF394 at 438.523 kb on + strand, within GFF394 at 438.523 kb on + strand, within GFF394 at 438.524 kb on - strand, within GFF394 at 438.524 kb on - strand, within GFF394 at 438.524 kb on - strand, within GFF394
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and Methanol (C) remove 434,971 + GFF391 0.58 -0.8 434,972 - GFF391 0.58 -1.2 434,975 + GFF391 0.58 +0.5 435,113 + GFF391 0.72 +0.0 435,114 - GFF391 0.72 +0.5 435,139 + GFF391 0.74 -1.1 435,140 - GFF391 0.74 +0.6 435,204 + GFF391 0.81 +0.5 435,205 - GFF391 0.81 -0.1 435,205 - GFF391 0.81 -0.7 435,240 + GFF391 0.84 -0.3 435,241 - GFF391 0.84 +0.2 435,397 - -0.8 435,397 - -0.7 435,397 - -0.4 435,397 - -1.4 435,397 - -0.2 435,461 - -1.2 435,554 - GFF392 0.27 -0.6 435,604 - GFF392 0.45 -1.4 435,610 + GFF392 0.47 +0.2 435,663 - GFF392 0.66 -1.2 435,686 - GFF392 0.74 -0.6 435,686 - GFF392 0.74 -1.3 435,708 - GFF392 0.82 -1.1 435,745 - +0.4 435,745 - -1.1 435,794 - -0.9 435,794 - -1.7 435,813 + -0.5 435,813 + -0.1 435,813 + -0.1 435,813 + -0.3 435,813 + -0.6 435,814 - -0.7 435,814 - -0.7 435,814 - -1.1 435,814 - -1.4 435,814 - -0.9 435,814 - -0.4 435,815 + +0.9 435,815 + -0.1 435,815 + -2.0 435,824 + +0.5 435,851 - -1.2 435,857 + -0.2 435,857 + -0.9 435,858 - -0.1 435,994 + -1.1 435,994 + -1.3 436,020 + -1.2 436,031 - +0.6 436,071 + +0.6 436,071 + -0.3 436,085 + -1.1 436,085 + -0.8 436,085 + +1.7 436,085 + -1.1 436,086 - -1.9 436,098 + GFF393 0.10 -1.7 436,099 - GFF393 0.10 +0.9 436,099 - GFF393 0.10 -0.7 436,099 - GFF393 0.10 -1.1 436,099 - GFF393 0.10 +0.1 436,102 + GFF393 0.10 +0.5 436,102 + GFF393 0.10 -0.9 436,102 + GFF393 0.10 -0.1 436,103 - GFF393 0.11 -0.7 436,108 + GFF393 0.11 -0.9 436,108 + GFF393 0.11 +0.1 436,108 + GFF393 0.11 +0.5 436,133 + GFF393 0.12 -0.3 436,157 + GFF393 0.14 -1.9 436,158 - GFF393 0.14 -2.1 436,158 - GFF393 0.14 -0.4 436,158 - GFF393 0.14 +1.5 436,158 - GFF393 0.14 -0.7 436,250 + GFF393 0.19 -1.1 436,250 + GFF393 0.19 +0.9 436,250 + GFF393 0.19 +1.7 436,251 - GFF393 0.19 -0.6 436,324 + GFF393 0.24 -0.1 436,325 - GFF393 0.24 -1.7 436,325 - GFF393 0.24 -1.4 436,336 + GFF393 0.25 -0.1 436,397 + GFF393 0.28 +0.2 436,397 + GFF393 0.28 -2.1 436,398 - GFF393 0.28 -1.7 436,398 - GFF393 0.28 -0.1 436,398 - GFF393 0.28 -0.9 436,398 - GFF393 0.28 +0.3 436,458 + GFF393 0.32 -0.9 436,459 - GFF393 0.32 -1.3 436,459 - GFF393 0.32 +0.2 436,487 + GFF393 0.34 -0.3 436,621 + GFF393 0.42 +0.2 436,621 - GFF393 0.42 -0.7 436,632 + GFF393 0.43 -0.9 436,632 + GFF393 0.43 -0.6 436,636 + GFF393 0.43 +0.4 436,636 + GFF393 0.43 +0.9 436,636 + GFF393 0.43 +0.3 436,684 + GFF393 0.46 -0.6 436,685 - GFF393 0.46 -0.2 436,733 + GFF393 0.49 -1.0 436,733 + GFF393 0.49 -0.7 436,733 + GFF393 0.49 -0.9 436,733 + GFF393 0.49 +0.2 436,733 + GFF393 0.49 -0.3 436,734 - GFF393 0.49 -0.0 436,735 + GFF393 0.49 -1.7 436,751 + GFF393 0.50 -0.9 436,751 + GFF393 0.50 -0.9 436,751 + GFF393 0.50 +1.2 436,751 + GFF393 0.50 -0.7 436,752 - GFF393 0.50 -1.3 436,752 - GFF393 0.50 +0.6 436,752 - GFF393 0.50 -0.3 436,752 - GFF393 0.50 -0.3 436,752 - GFF393 0.50 +1.2 436,752 - GFF393 0.50 -1.4 436,752 - GFF393 0.50 -0.8 436,754 + GFF393 0.50 -0.1 436,754 + GFF393 0.50 -1.0 436,755 - GFF393 0.50 +0.6 436,755 - GFF393 0.50 -1.1 436,755 - GFF393 0.50 -1.1 436,755 - GFF393 0.50 -0.9 436,856 + GFF393 0.56 -0.1 436,857 - GFF393 0.56 -1.1 436,857 - GFF393 0.56 -1.1 436,857 - GFF393 0.56 -1.0 436,857 - GFF393 0.56 +0.2 436,908 + GFF393 0.59 +0.0 436,909 - GFF393 0.59 +0.2 436,940 - GFF393 0.61 -1.5 437,067 + GFF393 0.69 -1.2 437,067 + GFF393 0.69 +0.2 437,101 + GFF393 0.71 -2.1 437,101 + GFF393 0.71 +0.5 437,101 + GFF393 0.71 -1.1 437,101 + GFF393 0.71 -0.6 437,102 - GFF393 0.71 -0.2 437,102 - GFF393 0.71 -2.3 437,102 - GFF393 0.71 +0.6 437,102 - GFF393 0.71 +0.0 437,102 - GFF393 0.71 +0.1 437,102 - GFF393 0.71 -1.6 437,118 + GFF393 0.72 -0.2 437,119 - GFF393 0.72 -0.9 437,286 - GFF393 0.82 -0.2 437,300 + GFF393 0.83 -0.7 437,301 - GFF393 0.83 -0.3 437,312 - GFF393 0.84 -0.8 437,334 + GFF393 0.85 -1.1 437,335 - GFF393 0.85 +0.4 437,372 - GFF393 0.87 -0.4 437,431 + -1.7 437,446 - -0.1 437,446 - -2.3 437,491 + -1.0 437,491 + +0.2 437,511 - -1.8 437,701 + +0.6 437,735 - -1.9 437,748 - +0.1 437,751 + -1.3 437,804 + -0.4 437,804 + -0.1 437,804 + +0.4 437,804 + +0.5 437,805 - +0.3 437,828 - -0.6 437,828 - -0.1 437,828 - -1.8 437,828 - -0.6 437,828 - -0.1 437,889 + -0.3 437,889 + +1.2 437,889 + -0.5 437,889 + -1.5 437,889 + -1.5 437,890 - +0.1 437,890 - -0.9 437,890 - +0.6 437,890 - -0.1 437,890 - -0.5 437,890 - +0.1 437,890 - -0.1 437,890 - -0.1 437,891 + -0.6 437,891 + -0.9 437,891 + -0.1 437,891 + +0.1 437,891 + -1.3 437,891 + -0.9 437,892 - -0.1 437,892 - +0.5 437,892 - -0.5 437,892 - -0.3 437,892 - -0.3 437,892 - +0.1 437,893 + +0.5 437,893 + -0.9 437,893 + -0.1 437,893 + +0.9 437,893 + -1.8 437,893 + -0.1 437,894 - -1.2 437,894 - -1.4 437,911 - -1.1 437,953 + +0.4 437,954 - -1.1 437,991 + +0.2 437,992 - GFF394 0.10 -2.0 438,032 + GFF394 0.12 -0.1 438,033 - GFF394 0.13 -1.2 438,043 + GFF394 0.13 +0.1 438,144 - GFF394 0.19 -0.3 438,218 - GFF394 0.24 -1.4 438,313 + GFF394 0.30 -0.0 438,357 - GFF394 0.32 -0.5 438,361 + GFF394 0.33 -2.6 438,362 - GFF394 0.33 +0.3 438,401 - GFF394 0.35 -0.9 438,465 - GFF394 0.39 -0.1 438,523 + GFF394 0.43 -1.2 438,523 + GFF394 0.43 -1.2 438,524 - GFF394 0.43 -1.1 438,524 - GFF394 0.43 -0.9 438,524 - GFF394 0.43 -1.3
Or see this region's nucleotide sequence