Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02586

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,702,523	+		MPMX19_02585	0.30	-2.2
2,702,523	+		MPMX19_02585	0.30	+0.7
2,702,523	+		MPMX19_02585	0.30	+0.5
2,702,524	-		MPMX19_02585	0.30	+0.7
2,702,524	-		MPMX19_02585	0.30	-0.6
2,702,524	-		MPMX19_02585	0.30	+1.1
2,702,628	+		MPMX19_02585	0.38	+1.9
2,702,862	+		MPMX19_02585	0.56	-0.6
2,702,862	+		MPMX19_02585	0.56	+0.5
2,702,862	+		MPMX19_02585	0.56	-1.0
2,702,863	-		MPMX19_02585	0.56	+0.5
2,702,863	-		MPMX19_02585	0.56	+0.5
2,702,863	-		MPMX19_02585	0.56	-1.3
2,702,863	-		MPMX19_02585	0.56	-0.6
2,702,863	-		MPMX19_02585	0.56	-1.1
2,702,863	-		MPMX19_02585	0.56	+1.0
2,702,863	-		MPMX19_02585	0.56	-1.0
2,703,315	+		MPMX19_02585	0.90	+0.8
2,703,315	+		MPMX19_02585	0.90	+0.6
2,703,315	+		MPMX19_02585	0.90	+1.1
2,703,315	+		MPMX19_02585	0.90	-0.0
2,703,315	+		MPMX19_02585	0.90	-0.6
2,703,315	+		MPMX19_02585	0.90	+1.8
2,703,315	+		MPMX19_02585	0.90	-1.8
2,703,315	+		MPMX19_02585	0.90	-0.5
2,703,315	+		MPMX19_02585	0.90	+0.2
2,703,315	+		MPMX19_02585	0.90	+0.9
2,703,315	+		MPMX19_02585	0.90	-0.3
2,703,315	+		MPMX19_02585	0.90	+0.7
2,703,315	+		MPMX19_02585	0.90	+1.5
2,703,315	+		MPMX19_02585	0.90	-0.3
2,703,315	+		MPMX19_02585	0.90	+1.7
2,703,315	+		MPMX19_02585	0.90	+0.5
2,703,315	+		MPMX19_02585	0.90	+0.7
2,703,315	+		MPMX19_02585	0.90	-0.5
2,703,315	+		MPMX19_02585	0.90	-0.3
2,703,315	+		MPMX19_02585	0.90	+0.1
2,703,315	+		MPMX19_02585	0.90	+1.3
2,703,315	+		MPMX19_02585	0.90	+0.3
2,703,316	-		MPMX19_02585	0.90	+1.1
2,703,316	-		MPMX19_02585	0.90	-0.9
2,703,316	-		MPMX19_02585	0.90	+0.3
2,703,316	-		MPMX19_02585	0.90	-0.0
2,703,316	-		MPMX19_02585	0.90	+0.3
2,703,316	-		MPMX19_02585	0.90	-0.6
2,703,316	-		MPMX19_02585	0.90	-0.8
2,703,316	-		MPMX19_02585	0.90	-0.8
2,703,316	-		MPMX19_02585	0.90	-0.0
2,703,316	-		MPMX19_02585	0.90	-0.2
2,703,316	-		MPMX19_02585	0.90	+0.2
2,703,316	-		MPMX19_02585	0.90	+2.4
2,703,316	-		MPMX19_02585	0.90	+0.9
2,703,316	-		MPMX19_02585	0.90	+0.3
2,703,316	-		MPMX19_02585	0.90	+0.8
2,703,316	-		MPMX19_02585	0.90	+0.4
2,703,316	-		MPMX19_02585	0.90	-0.5
2,703,316	-		MPMX19_02585	0.90	-0.3
2,703,316	-		MPMX19_02585	0.90	+1.1
2,703,316	-		MPMX19_02585	0.90	-0.2
2,703,316	-		MPMX19_02585	0.90	+0.3
2,703,316	-		MPMX19_02585	0.90	-0.3
2,703,316	-		MPMX19_02585	0.90	-0.8
2,703,316	-		MPMX19_02585	0.90	+1.0
2,703,316	-		MPMX19_02585	0.90	+1.1
2,703,316	-		MPMX19_02585	0.90	+0.2
2,703,316	-		MPMX19_02585	0.90	+0.1
2,703,316	-		MPMX19_02585	0.90	+0.7
2,703,316	-		MPMX19_02585	0.90	-0.9
2,703,316	-		MPMX19_02585	0.90	-0.5
2,703,316	-		MPMX19_02585	0.90	-0.2
2,703,316	-		MPMX19_02585	0.90	+0.7
2,703,316	-		MPMX19_02585	0.90	+0.7
2,703,316	-		MPMX19_02585	0.90	+0.4
2,703,316	-		MPMX19_02585	0.90	+0.2
2,703,316	-		MPMX19_02585	0.90	-0.3
2,703,316	-		MPMX19_02585	0.90	-0.6
2,703,316	-		MPMX19_02585	0.90	+0.5
2,703,316	-		MPMX19_02585	0.90	-0.8
2,703,316	-		MPMX19_02585	0.90	-0.6
2,703,316	-		MPMX19_02585	0.90	+0.3
2,703,316	-		MPMX19_02585	0.90	-1.3
2,703,566	+		MPMX19_02586	0.13	-0.9
2,703,566	+		MPMX19_02586	0.13	+1.0
2,703,566	+		MPMX19_02586	0.13	+1.3
2,703,566	+		MPMX19_02586	0.13	-2.3
2,703,566	+		MPMX19_02586	0.13	+0.5
2,703,567	-		MPMX19_02586	0.13	-0.5
2,703,567	-		MPMX19_02586	0.13	-0.7
2,703,567	-		MPMX19_02586	0.13	-0.9
2,703,567	-		MPMX19_02586	0.13	+0.3
2,703,567	-		MPMX19_02586	0.13	+0.7
2,703,567	-		MPMX19_02586	0.13	-0.0
2,703,747	-		MPMX19_02586	0.35	+0.4
2,703,830	+		MPMX19_02586	0.45	+0.2
2,703,830	+		MPMX19_02586	0.45	-0.5
2,703,830	+		MPMX19_02586	0.45	+1.1
2,703,830	+		MPMX19_02586	0.45	-0.3
2,703,830	+		MPMX19_02586	0.45	+0.8
2,703,830	+		MPMX19_02586	0.45	+0.7
2,703,830	+		MPMX19_02586	0.45	+0.4
2,703,830	+		MPMX19_02586	0.45	+0.7
2,703,830	+		MPMX19_02586	0.45	-0.2
2,703,830	+		MPMX19_02586	0.45	+0.3
2,703,830	+		MPMX19_02586	0.45	+0.2
2,703,830	+		MPMX19_02586	0.45	+0.5
2,703,830	+		MPMX19_02586	0.45	-0.3
2,703,830	+		MPMX19_02586	0.45	-1.0
2,703,830	+		MPMX19_02586	0.45	-1.0
2,703,831	-		MPMX19_02586	0.45	+0.6
2,703,831	-		MPMX19_02586	0.45	+0.0
2,703,831	-		MPMX19_02586	0.45	+0.5
2,703,831	-		MPMX19_02586	0.45	+0.8
2,703,831	-		MPMX19_02586	0.45	+0.2
2,703,831	-		MPMX19_02586	0.45	+0.1
2,703,831	-		MPMX19_02586	0.45	-0.0
2,703,831	-		MPMX19_02586	0.45	-0.1
2,703,831	-		MPMX19_02586	0.45	-1.6
2,703,845	+		MPMX19_02586	0.47	+0.1
2,704,118	+		MPMX19_02586	0.80	-0.8
2,704,118	+		MPMX19_02586	0.80	-0.5
2,704,118	+		MPMX19_02586	0.80	-0.3
2,704,118	+		MPMX19_02586	0.80	-0.5
2,704,118	+		MPMX19_02586	0.80	+0.3
2,704,118	+		MPMX19_02586	0.80	+0.1
2,704,118	+		MPMX19_02586	0.80	+0.5
2,704,118	+		MPMX19_02586	0.80	-0.2
2,704,118	+		MPMX19_02586	0.80	-2.3
2,704,118	+		MPMX19_02586	0.80	-0.9
2,704,118	+		MPMX19_02586	0.80	+0.8
2,704,119	-		MPMX19_02586	0.80	+0.3
2,704,119	-		MPMX19_02586	0.80	-0.5
2,704,119	-		MPMX19_02586	0.80	+0.1
2,704,119	-		MPMX19_02586	0.80	-0.8
2,704,119	-		MPMX19_02586	0.80	+0.5
2,704,119	-		MPMX19_02586	0.80	+1.5
2,704,119	-		MPMX19_02586	0.80	-0.8
2,704,119	-		MPMX19_02586	0.80	-0.4
2,704,119	-		MPMX19_02586	0.80	-0.2
2,704,119	-		MPMX19_02586	0.80	+0.7
2,704,119	-		MPMX19_02586	0.80	+1.3
2,704,119	-		MPMX19_02586	0.80	+0.1
2,704,119	-		MPMX19_02586	0.80	-0.0
2,704,119	-		MPMX19_02586	0.80	-0.7
2,704,119	-		MPMX19_02586	0.80	-0.6
2,704,119	-		MPMX19_02586	0.80	+1.2
2,704,119	-		MPMX19_02586	0.80	+2.1
2,704,119	-		MPMX19_02586	0.80	+1.5
2,704,119	-		MPMX19_02586	0.80	+0.3
2,704,119	-		MPMX19_02586	0.80	-0.8
2,704,119	-		MPMX19_02586	0.80	+0.1
2,704,119	-		MPMX19_02586	0.80	+0.1
2,704,119	-		MPMX19_02586	0.80	-0.3
2,704,119	-		MPMX19_02586	0.80	-0.0
2,704,119	-		MPMX19_02586	0.80	-0.0
2,704,119	-		MPMX19_02586	0.80	+0.2
2,704,119	-		MPMX19_02586	0.80	+1.0
2,704,119	-		MPMX19_02586	0.80	-0.3
2,704,262	+				-0.0
2,704,262	+				+0.3
2,704,262	+				+0.4
2,704,262	+				+0.1
2,704,262	+				-1.2
2,704,262	+				+0.2
2,704,262	+				+1.5
2,704,262	+				+0.7
2,704,263	-				+0.2
2,704,263	-				-0.3
2,704,263	-				-0.6
2,704,263	-				+0.5
2,704,263	-				+0.8
2,704,263	-				-1.5
2,704,263	-				+0.7
2,704,263	-				-0.5
2,704,263	-				+0.5
2,704,263	-				+1.0
2,704,263	-				+1.0
2,704,263	-				+0.5
2,704,263	-				+0.4
2,704,263	-				+1.0
2,704,277	+				+1.9
2,704,277	+				+1.5
2,704,277	+				-0.9
2,704,277	+				-0.3
2,704,278	-				+0.1
2,704,278	-				-0.6
2,704,457	+		MPMX19_02587	0.15	+0.2
2,704,457	+		MPMX19_02587	0.15	+0.7
2,704,457	+		MPMX19_02587	0.15	-0.3
2,704,457	+		MPMX19_02587	0.15	-0.8
2,704,457	+		MPMX19_02587	0.15	-0.6
2,704,457	+		MPMX19_02587	0.15	-1.1
2,704,457	+		MPMX19_02587	0.15	-1.0
2,704,457	+		MPMX19_02587	0.15	-0.4
2,704,457	+		MPMX19_02587	0.15	+0.2
2,704,457	+		MPMX19_02587	0.15	+1.1
2,704,457	+		MPMX19_02587	0.15	+0.7
2,704,457	+		MPMX19_02587	0.15	-0.9
2,704,458	-		MPMX19_02587	0.15	-1.0
2,704,458	-		MPMX19_02587	0.15	-1.9
2,704,458	-		MPMX19_02587	0.15	+0.1
2,704,458	-		MPMX19_02587	0.15	-0.8
2,704,458	-		MPMX19_02587	0.15	-0.3
2,704,703	+		MPMX19_02587	0.48	+0.4
2,704,703	+		MPMX19_02587	0.48	+0.3
2,704,703	+		MPMX19_02587	0.48	-0.0
2,704,703	+		MPMX19_02587	0.48	+0.7
2,704,703	+		MPMX19_02587	0.48	-0.5
2,704,703	+		MPMX19_02587	0.48	-1.0
2,704,703	+		MPMX19_02587	0.48	-0.2
2,704,703	+		MPMX19_02587	0.48	+0.9
2,704,703	+		MPMX19_02587	0.48	+0.1
2,704,703	+		MPMX19_02587	0.48	+0.2
2,704,703	+		MPMX19_02587	0.48	-0.3
2,704,703	+		MPMX19_02587	0.48	+1.3
2,704,703	+		MPMX19_02587	0.48	-0.0
2,704,704	-		MPMX19_02587	0.48	-0.5
2,704,704	-		MPMX19_02587	0.48	-1.0
2,704,704	-		MPMX19_02587	0.48	-0.0
2,704,704	-		MPMX19_02587	0.48	-0.6
2,704,704	-		MPMX19_02587	0.48	-0.1
2,704,704	-		MPMX19_02587	0.48	-0.2
2,704,704	-		MPMX19_02587	0.48	-0.2
2,704,704	-		MPMX19_02587	0.48	+0.1
2,704,704	-		MPMX19_02587	0.48	-0.8
2,704,704	-		MPMX19_02587	0.48	-1.8
2,704,704	-		MPMX19_02587	0.48	-0.8
2,704,704	-		MPMX19_02587	0.48	-0.1
2,704,704	-		MPMX19_02587	0.48	-0.3
2,704,704	-		MPMX19_02587	0.48	-0.8
2,704,705	+		MPMX19_02587	0.48	-2.0
2,704,705	+		MPMX19_02587	0.48	+1.0
2,704,705	+		MPMX19_02587	0.48	-0.2
2,704,705	+		MPMX19_02587	0.48	-1.3
2,704,705	+		MPMX19_02587	0.48	-0.0
2,704,705	+		MPMX19_02587	0.48	-0.3
2,704,705	+		MPMX19_02587	0.48	-0.6
2,704,705	+		MPMX19_02587	0.48	-0.5
2,704,705	+		MPMX19_02587	0.48	+1.5
2,704,705	+		MPMX19_02587	0.48	+0.5
2,704,705	+		MPMX19_02587	0.48	+0.3
2,704,706	-		MPMX19_02587	0.48	-2.2
2,704,706	-		MPMX19_02587	0.48	-1.3
2,704,706	-		MPMX19_02587	0.48	-0.5
2,704,706	-		MPMX19_02587	0.48	-1.6
2,704,706	-		MPMX19_02587	0.48	-1.0
2,704,706	-		MPMX19_02587	0.48	-0.0
2,704,706	-		MPMX19_02587	0.48	-0.9
2,704,706	-		MPMX19_02587	0.48	-1.0
2,704,706	-		MPMX19_02587	0.48	+1.0
2,704,706	-		MPMX19_02587	0.48	+0.5
2,704,706	-		MPMX19_02587	0.48	-0.9
2,704,706	-		MPMX19_02587	0.48	-1.4
2,704,706	-		MPMX19_02587	0.48	-1.0
2,704,706	-		MPMX19_02587	0.48	-0.0
2,704,857	+		MPMX19_02587	0.68	-0.5
2,704,857	+		MPMX19_02587	0.68	-0.9
2,704,857	+		MPMX19_02587	0.68	+0.2
2,704,857	+		MPMX19_02587	0.68	-0.9
2,704,857	+		MPMX19_02587	0.68	-0.6
2,704,857	+		MPMX19_02587	0.68	-0.0
2,704,857	+		MPMX19_02587	0.68	-0.8
2,704,857	+		MPMX19_02587	0.68	-0.0
2,704,857	+		MPMX19_02587	0.68	+0.4
2,704,857	+		MPMX19_02587	0.68	-2.8
2,704,857	+		MPMX19_02587	0.68	+0.1
2,704,857	+		MPMX19_02587	0.68	+0.3
2,704,857	+		MPMX19_02587	0.68	+0.1
2,704,857	+		MPMX19_02587	0.68	-0.2
2,704,858	-		MPMX19_02587	0.69	-0.0
2,704,858	-		MPMX19_02587	0.69	-0.3
2,704,858	-		MPMX19_02587	0.69	+0.5
2,704,858	-		MPMX19_02587	0.69	+1.5
2,704,858	-		MPMX19_02587	0.69	+0.4
2,704,858	-		MPMX19_02587	0.69	-1.3
2,704,858	-		MPMX19_02587	0.69	-0.4
2,704,858	-		MPMX19_02587	0.69	-0.0
2,704,858	-		MPMX19_02587	0.69	-1.4
2,704,858	-		MPMX19_02587	0.69	+0.2
2,704,858	-		MPMX19_02587	0.69	-0.8
2,704,858	-		MPMX19_02587	0.69	-1.8
2,704,858	-		MPMX19_02587	0.69	+0.0
2,704,858	-		MPMX19_02587	0.69	-1.7
2,704,858	-		MPMX19_02587	0.69	+1.1
2,704,858	-		MPMX19_02587	0.69	-1.2
2,704,858	-		MPMX19_02587	0.69	-0.5
2,704,858	-		MPMX19_02587	0.69	+0.5
2,704,964	+		MPMX19_02587	0.83	-1.8
2,704,964	+		MPMX19_02587	0.83	-0.8
2,704,964	+		MPMX19_02587	0.83	-0.8
2,704,964	+		MPMX19_02587	0.83	-0.7
2,704,964	+		MPMX19_02587	0.83	-0.5
2,704,964	+		MPMX19_02587	0.83	-1.9
2,704,964	+		MPMX19_02587	0.83	-1.2
2,704,964	+		MPMX19_02587	0.83	-1.0
2,704,965	-		MPMX19_02587	0.83	-1.4
2,704,965	-		MPMX19_02587	0.83	-0.4
2,704,965	-		MPMX19_02587	0.83	-0.9
2,704,965	-		MPMX19_02587	0.83	+0.5
2,704,965	-		MPMX19_02587	0.83	-0.2
2,704,965	-		MPMX19_02587	0.83	+0.3
2,704,965	-		MPMX19_02587	0.83	-0.0
2,704,965	-		MPMX19_02587	0.83	+0.4
2,704,965	-		MPMX19_02587	0.83	+0.5
2,704,965	-		MPMX19_02587	0.83	-0.8
2,704,965	-		MPMX19_02587	0.83	-1.0
2,704,965	-		MPMX19_02587	0.83	-0.3
2,704,978	+		MPMX19_02587	0.85	-0.5
2,704,979	-		MPMX19_02587	0.85	+0.4
2,704,989	+		MPMX19_02587	0.86	-2.8
2,704,989	+		MPMX19_02587	0.86	-0.5
2,704,989	+		MPMX19_02587	0.86	-0.6
2,704,989	+		MPMX19_02587	0.86	-0.1
2,704,989	+		MPMX19_02587	0.86	-0.9
2,704,989	+		MPMX19_02587	0.86	-2.0
2,704,989	+		MPMX19_02587	0.86	-0.5
2,704,989	+		MPMX19_02587	0.86	-0.3
2,704,989	+		MPMX19_02587	0.86	-1.5
2,704,990	-		MPMX19_02587	0.86	-0.5
2,704,990	-		MPMX19_02587	0.86	-0.3
2,704,990	-		MPMX19_02587	0.86	-0.3
2,704,990	-		MPMX19_02587	0.86	+0.3
2,704,990	-		MPMX19_02587	0.86	+0.4
2,704,990	-		MPMX19_02587	0.86	-0.5
2,704,990	-		MPMX19_02587	0.86	+1.7
2,704,990	-		MPMX19_02587	0.86	+0.4
2,704,990	-		MPMX19_02587	0.86	-0.5
2,704,990	-		MPMX19_02587	0.86	-1.0
2,704,990	-		MPMX19_02587	0.86	-0.5
2,704,990	-		MPMX19_02587	0.86	-0.8
2,704,990	-		MPMX19_02587	0.86	+0.5
2,704,990	-		MPMX19_02587	0.86	-0.5
2,705,077	+				-1.2
2,705,090	+				-2.0
2,705,090	+				-0.4
2,705,090	+				+0.2
2,705,090	+				+0.7
2,705,090	+				-0.0
2,705,090	+				-0.8
2,705,090	+				-1.1
2,705,090	+				-0.0
2,705,090	+				-0.4
2,705,091	-				-0.0
2,705,091	-				-0.8
2,705,091	-				-0.2
2,705,091	-				-0.7
2,705,091	-				+0.0
2,705,091	-				-0.4
2,705,091	-				-2.1
2,705,091	-				-0.9
2,705,091	-				+0.4
2,705,091	-				-1.0
2,705,091	-				+1.1
2,705,091	-				-0.7
2,705,091	-				-1.2
2,705,091	-				-1.2
2,705,113	+				-0.3
2,705,113	+				-0.6
2,705,114	-				+0.4
2,705,114	-				-0.2
2,705,172	-				+0.1
2,705,172	-				+0.4
2,705,219	+		MPMX19_02588	0.13	+1.0
2,705,219	+		MPMX19_02588	0.13	-0.2
2,705,220	-		MPMX19_02588	0.13	+2.0
2,705,220	-		MPMX19_02588	0.13	-1.6
2,705,220	-		MPMX19_02588	0.13	+0.7