Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02486

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,605,937	+				-0.8
2,605,937	+				+0.1
2,605,937	+				+0.3
2,605,937	+				+1.0
2,605,937	+				+1.2
2,605,938	-				-1.3
2,605,965	-				-1.4
2,605,965	-				-0.3
2,606,635	+				-1.4
2,606,635	+				-1.0
2,606,635	+				+0.9
2,606,635	+				-0.3
2,606,645	+				-0.2
2,606,645	+				+1.6
2,606,645	+				+0.4
2,606,645	+				-1.0
2,606,646	-				-1.0
2,606,646	-				-0.4
2,606,646	-				-0.7
2,606,646	-				-0.3
2,606,651	+				-0.0
2,606,651	+				+0.4
2,606,651	+				+0.6
2,606,651	+				-0.4
2,606,651	+				-0.2
2,606,651	+				+0.6
2,606,651	+				-0.6
2,606,651	+				+0.7
2,606,651	+				+2.0
2,606,651	+				+0.6
2,606,651	+				+0.7
2,606,651	+				-0.3
2,606,652	-				-0.3
2,606,652	-				-0.5
2,606,652	-				+1.1
2,606,652	-				-0.6
2,606,720	+				+0.5
2,606,720	+				-1.3
2,606,721	-				+0.2
2,606,721	-				-1.3
2,606,721	-				-1.1
2,606,721	-				-0.6
2,606,721	-				-0.8
2,606,721	-				-0.8
2,606,725	+				-0.5
2,606,725	+				-1.8
2,606,725	+				+0.1
2,606,725	+				-1.9
2,606,726	-				+0.2
2,606,726	-				+0.9
2,606,726	-				-0.7
2,606,726	-				-0.0
2,606,726	-				-1.7
2,606,759	+				-0.0
2,606,759	+				-0.2
2,606,760	-				-0.1
2,606,760	-				+0.6
2,606,760	-				-2.1
2,606,760	-				-1.1
2,606,772	+				-2.0
2,606,772	+				-0.6
2,606,773	-				-0.8
2,606,773	-				-0.8
2,606,773	-				-1.3
2,606,773	-				-0.9
2,606,773	-				-0.7
2,606,885	+		MPMX19_02486	0.21	-0.2
2,606,885	+		MPMX19_02486	0.21	+1.0
2,606,885	+		MPMX19_02486	0.21	-1.1
2,606,885	+		MPMX19_02486	0.21	-1.4
2,606,885	+		MPMX19_02486	0.21	-1.6
2,606,886	-		MPMX19_02486	0.22	+0.1
2,606,886	-		MPMX19_02486	0.22	-1.0
2,606,886	-		MPMX19_02486	0.22	-0.8
2,606,886	-		MPMX19_02486	0.22	-1.2
2,606,960	-		MPMX19_02486	0.42	-1.4
2,607,170	+				-1.8
2,607,170	+				-1.1
2,607,170	+				+0.1
2,607,171	-				-0.8
2,607,268	+				-0.8
2,607,268	+				-0.7
2,607,268	+				-0.5
2,607,268	+				-1.3
2,607,268	+				-0.4
2,607,268	+				+0.9
2,607,268	+				-0.1
2,607,268	+				-0.4
2,607,268	+				-0.6
2,607,268	+				-1.0
2,607,268	+				-1.0
2,607,268	+				-1.7
2,607,268	+				+0.2
2,607,268	+				-0.0
2,607,268	+				-0.8
2,607,268	+				+0.7
2,607,268	+				-0.6
2,607,268	+				+0.1
2,607,268	+				-0.3
2,607,268	+				+0.2
2,607,269	-				+1.0
2,607,269	-				-0.0
2,607,269	-				+0.8
2,607,269	-				-0.1
2,607,269	-				+0.1
2,607,269	-				-0.4
2,607,269	-				-0.0
2,607,269	-				+0.0
2,607,269	-				+0.4
2,607,269	-				-0.2
2,607,269	-				+0.6
2,607,274	+				-0.4
2,607,274	+				+1.8
2,607,274	+				-0.3
2,607,274	+				-0.9
2,607,274	+				-0.0
2,607,274	+				-1.3
2,607,274	+				-0.0
2,607,274	+				+0.1
2,607,275	-				-0.8
2,607,275	-				+0.2
2,607,275	-				-1.6
2,607,275	-				+0.9
2,607,275	-				-0.4
2,607,275	-				-0.2
2,607,275	-				+0.6
2,607,275	-				+0.4
2,607,301	+		MPMX19_02487	0.13	-0.6
2,607,301	+		MPMX19_02487	0.13	-0.6
2,607,301	+		MPMX19_02487	0.13	-1.4
2,607,301	+		MPMX19_02487	0.13	+1.0
2,607,301	+		MPMX19_02487	0.13	+0.2
2,607,301	+		MPMX19_02487	0.13	-0.3
2,607,301	+		MPMX19_02487	0.13	-0.2
2,607,301	+		MPMX19_02487	0.13	+0.3
2,607,301	+		MPMX19_02487	0.13	+0.3
2,607,302	-		MPMX19_02487	0.13	-0.4
2,607,302	-		MPMX19_02487	0.13	+1.6
2,607,302	-		MPMX19_02487	0.13	+0.6
2,607,302	-		MPMX19_02487	0.13	-2.6
2,607,302	-		MPMX19_02487	0.13	+0.6
2,607,435	-		MPMX19_02487	0.28	-0.0
2,607,587	-		MPMX19_02487	0.46	-0.2
2,607,706	+		MPMX19_02487	0.59	+1.0
2,607,707	-		MPMX19_02487	0.60	-1.2
2,607,756	-		MPMX19_02487	0.65	-0.0
2,607,756	-		MPMX19_02487	0.65	-0.6
2,607,756	-		MPMX19_02487	0.65	-0.5
2,607,823	+		MPMX19_02487	0.73	+0.6
2,607,823	+		MPMX19_02487	0.73	+0.2
2,607,823	+		MPMX19_02487	0.73	+0.3
2,607,823	+		MPMX19_02487	0.73	-1.2
2,607,823	+		MPMX19_02487	0.73	+1.5
2,607,823	+		MPMX19_02487	0.73	-0.2
2,607,823	+		MPMX19_02487	0.73	-1.2
2,607,823	+		MPMX19_02487	0.73	-1.6
2,607,823	+		MPMX19_02487	0.73	-0.6
2,607,823	+		MPMX19_02487	0.73	+0.4
2,607,823	+		MPMX19_02487	0.73	+0.4
2,607,823	+		MPMX19_02487	0.73	-0.2
2,607,823	+		MPMX19_02487	0.73	+0.4
2,607,823	+		MPMX19_02487	0.73	-0.2
2,607,823	+		MPMX19_02487	0.73	-1.3
2,607,823	+		MPMX19_02487	0.73	+0.1
2,607,823	+		MPMX19_02487	0.73	-0.0
2,607,823	+		MPMX19_02487	0.73	+0.8
2,607,824	-		MPMX19_02487	0.73	-1.3
2,607,824	-		MPMX19_02487	0.73	-0.2
2,607,824	-		MPMX19_02487	0.73	+0.0
2,607,824	-		MPMX19_02487	0.73	+0.5
2,607,824	-		MPMX19_02487	0.73	-0.5
2,607,824	-		MPMX19_02487	0.73	-0.7
2,607,824	-		MPMX19_02487	0.73	-0.5
2,607,824	-		MPMX19_02487	0.73	-0.0
2,607,943	+		MPMX19_02487	0.87	-0.0
2,607,943	+		MPMX19_02487	0.87	-1.2
2,607,943	+		MPMX19_02487	0.87	-0.2
2,607,943	+		MPMX19_02487	0.87	-0.5
2,607,943	+		MPMX19_02487	0.87	-0.9
2,607,943	+		MPMX19_02487	0.87	-0.7
2,607,943	+		MPMX19_02487	0.87	+0.4
2,607,943	+		MPMX19_02487	0.87	-0.3
2,607,944	-		MPMX19_02487	0.87	-0.9
2,607,944	-		MPMX19_02487	0.87	-0.3
2,607,944	-		MPMX19_02487	0.87	-1.8
2,607,958	+		MPMX19_02487	0.88	+0.3
2,607,959	-		MPMX19_02487	0.89	-0.8
2,607,959	-		MPMX19_02487	0.89	+1.0
2,608,015	+				-1.0
2,608,015	+				-2.2
2,608,015	+				-0.9
2,608,016	-				-0.8
2,608,016	-				+0.4
2,608,016	-				-0.3
2,608,016	-				-0.1
2,608,039	+				-0.2
2,608,039	+				+0.7
2,608,039	+				-0.6
2,608,039	+				+0.1
2,608,039	+				-0.4
2,608,039	+				+0.3
2,608,039	+				-1.0
2,608,039	+				-0.8
2,608,039	+				-1.6
2,608,039	+				+0.5
2,608,039	+				-0.2
2,608,039	+				-0.8
2,608,039	+				-1.4
2,608,040	-				-1.4
2,608,040	-				-0.0
2,608,040	-				-0.9
2,608,040	-				+0.3
2,608,040	-				-0.5
2,608,040	-				-1.0
2,608,040	-				-1.6
2,608,040	-				+0.5
2,608,040	-				+0.4
2,608,040	-				+0.3
2,608,040	-				-0.3
2,608,040	-				-0.5
2,608,107	+				-1.2
2,608,107	+				+0.7
2,608,107	+				-1.0
2,608,107	+				-1.3
2,608,108	-				+0.2
2,608,108	-				-1.5
2,608,108	-				-0.6
2,608,108	-				-0.2
2,608,108	-				-0.5
2,608,108	-				+0.7
2,608,113	+				-0.6
2,608,113	+				-0.8
2,608,113	+				+0.3
2,608,114	-				-0.9
2,608,114	-				-2.0
2,608,114	-				+0.1
2,608,114	-				-2.3
2,608,114	-				-1.1
2,608,114	-				-0.3
2,608,126	+				-0.5
2,608,126	+				-2.2
2,608,126	+				-1.8
2,608,127	-				-0.4
2,608,127	-				-0.5
2,608,162	+				-0.8
2,608,162	+				+0.1
2,608,162	+				-0.3
2,608,162	+				-1.5
2,608,162	+				+0.5
2,608,162	+				+0.4
2,608,162	+				-0.0
2,608,162	+				-0.3
2,608,162	+				-2.5
2,608,163	-				+0.2
2,608,163	-				-0.7
2,608,163	-				-0.1
2,608,163	-				-0.7
2,608,163	-				-0.5
2,608,163	-				-0.3