Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02393

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,515,576	+		MPMX19_02392	0.55	-1.8
2,515,576	+		MPMX19_02392	0.55	-0.8
2,515,576	+		MPMX19_02392	0.55	-2.3
2,515,577	-		MPMX19_02392	0.55	+0.5
2,515,577	-		MPMX19_02392	0.55	-1.2
2,515,577	-		MPMX19_02392	0.55	-0.1
2,515,577	-		MPMX19_02392	0.55	-1.9
2,515,577	-		MPMX19_02392	0.55	-1.1
2,515,577	-		MPMX19_02392	0.55	-0.9
2,515,735	+		MPMX19_02392	0.68	-1.1
2,515,735	+		MPMX19_02392	0.68	-1.1
2,515,735	+		MPMX19_02392	0.68	-0.9
2,515,736	-		MPMX19_02392	0.68	-0.2
2,515,736	-		MPMX19_02392	0.68	-0.3
2,515,736	-		MPMX19_02392	0.68	+0.2
2,515,747	+		MPMX19_02392	0.69	-1.1
2,515,747	+		MPMX19_02392	0.69	-0.5
2,515,747	+		MPMX19_02392	0.69	-2.6
2,515,747	+		MPMX19_02392	0.69	+0.5
2,515,748	-		MPMX19_02392	0.69	-2.1
2,515,804	+		MPMX19_02392	0.74	+0.9
2,515,804	+		MPMX19_02392	0.74	-1.3
2,515,804	+		MPMX19_02392	0.74	-0.6
2,515,804	+		MPMX19_02392	0.74	-1.3
2,515,804	+		MPMX19_02392	0.74	-1.3
2,515,805	-		MPMX19_02392	0.74	-1.5
2,515,805	-		MPMX19_02392	0.74	-0.6
2,515,805	-		MPMX19_02392	0.74	-0.3
2,515,805	-		MPMX19_02392	0.74	-0.4
2,515,805	-		MPMX19_02392	0.74	-0.3
2,515,805	-		MPMX19_02392	0.74	+0.3
2,515,805	-		MPMX19_02392	0.74	+0.2
2,515,805	-		MPMX19_02392	0.74	-0.3
2,515,805	-		MPMX19_02392	0.74	+0.2
2,515,805	-		MPMX19_02392	0.74	-0.3
2,515,805	-		MPMX19_02392	0.74	-0.8
2,515,805	-		MPMX19_02392	0.74	-0.9
2,515,805	-		MPMX19_02392	0.74	+0.0
2,515,805	-		MPMX19_02392	0.74	+0.9
2,515,850	+		MPMX19_02392	0.78	-0.2
2,515,850	+		MPMX19_02392	0.78	-0.4
2,515,850	+		MPMX19_02392	0.78	-0.6
2,515,850	+		MPMX19_02392	0.78	+0.3
2,515,850	+		MPMX19_02392	0.78	-0.9
2,515,851	-		MPMX19_02392	0.78	+0.3
2,515,851	-		MPMX19_02392	0.78	-0.9
2,515,851	-		MPMX19_02392	0.78	+0.5
2,515,851	-		MPMX19_02392	0.78	+0.1
2,515,851	-		MPMX19_02392	0.78	-0.8
2,515,851	-		MPMX19_02392	0.78	-0.5
2,515,851	-		MPMX19_02392	0.78	-1.1
2,515,852	+		MPMX19_02392	0.78	+1.1
2,515,852	+		MPMX19_02392	0.78	-0.7
2,515,852	+		MPMX19_02392	0.78	-0.5
2,515,852	+		MPMX19_02392	0.78	-0.6
2,515,852	+		MPMX19_02392	0.78	-1.3
2,515,852	+		MPMX19_02392	0.78	-2.3
2,515,852	+		MPMX19_02392	0.78	-1.6
2,515,852	+		MPMX19_02392	0.78	-0.6
2,515,852	+		MPMX19_02392	0.78	-1.6
2,515,852	+		MPMX19_02392	0.78	-0.8
2,515,852	+		MPMX19_02392	0.78	-0.1
2,515,853	-		MPMX19_02392	0.78	-1.1
2,515,853	-		MPMX19_02392	0.78	-0.8
2,515,853	-		MPMX19_02392	0.78	+0.4
2,515,853	-		MPMX19_02392	0.78	+0.0
2,515,853	-		MPMX19_02392	0.78	-0.3
2,515,853	-		MPMX19_02392	0.78	-0.1
2,515,853	-		MPMX19_02392	0.78	-0.1
2,515,853	-		MPMX19_02392	0.78	-1.5
2,515,853	-		MPMX19_02392	0.78	-2.3
2,515,853	-		MPMX19_02392	0.78	+0.9
2,515,853	-		MPMX19_02392	0.78	-2.8
2,515,853	-		MPMX19_02392	0.78	-1.4
2,515,927	+		MPMX19_02392	0.84	-1.5
2,515,927	+		MPMX19_02392	0.84	-0.5
2,515,927	+		MPMX19_02392	0.84	-2.4
2,515,927	+		MPMX19_02392	0.84	-0.6
2,515,927	+		MPMX19_02392	0.84	-1.7
2,515,927	+		MPMX19_02392	0.84	-1.1
2,515,927	+		MPMX19_02392	0.84	-0.3
2,515,928	-		MPMX19_02392	0.84	+0.1
2,515,928	-		MPMX19_02392	0.84	-0.1
2,515,928	-		MPMX19_02392	0.84	-0.6
2,515,928	-		MPMX19_02392	0.84	-0.8
2,515,928	-		MPMX19_02392	0.84	-1.5
2,515,928	-		MPMX19_02392	0.84	-1.0
2,515,928	-		MPMX19_02392	0.84	-0.5
2,515,928	-		MPMX19_02392	0.84	-0.4
2,515,928	-		MPMX19_02392	0.84	-1.9
2,515,928	-		MPMX19_02392	0.84	-0.7
2,515,985	+		MPMX19_02392	0.89	-1.0
2,516,139	+				-0.2
2,516,139	+				-1.2
2,516,139	+				+0.2
2,516,139	+				-0.8
2,516,210	+				-1.9
2,516,210	+				-0.6
2,516,210	+				+1.0
2,516,210	+				-0.5
2,516,210	+				-0.9
2,516,210	+				-1.5
2,516,210	+				-0.6
2,516,210	+				-1.6
2,516,211	-				+0.2
2,516,211	-				-1.1
2,516,211	-				-0.5
2,516,211	-				-0.5
2,516,211	-				+0.3
2,516,211	-				-0.1
2,516,211	-				-0.8
2,516,211	-				-0.5
2,516,211	-				+0.4
2,516,211	-				-1.0
2,516,211	-				-0.3
2,516,211	-				-0.7
2,516,211	-				-0.5
2,516,211	-				+0.4
2,516,211	-				-0.4
2,516,211	-				+0.5
2,516,222	-				-1.0
2,516,295	+				-0.4
2,516,295	+				-0.9
2,516,315	+				-0.9
2,516,316	-				-0.6
2,516,382	+				-0.6
2,516,382	+				-1.4
2,516,382	+				-1.6
2,516,382	+				-1.8
2,516,383	-				+0.2
2,516,389	+				-0.9
2,516,465	+				-1.6
2,516,465	+				-1.3
2,516,465	+				-0.9
2,516,465	+				+2.0
2,516,465	+				-0.5
2,516,465	+				+0.1
2,516,465	+				-1.0
2,516,466	-				-0.2
2,516,466	-				+0.4
2,516,466	-				-1.7
2,516,466	-				+0.2
2,516,615	+		MPMX19_02393	0.26	-1.1
2,516,615	+		MPMX19_02393	0.26	-0.6
2,516,615	+		MPMX19_02393	0.26	-0.2
2,516,615	+		MPMX19_02393	0.26	-0.1
2,516,615	+		MPMX19_02393	0.26	-0.6
2,516,615	+		MPMX19_02393	0.26	-1.8
2,516,615	+		MPMX19_02393	0.26	+0.8
2,516,615	+		MPMX19_02393	0.26	-0.3
2,516,615	+		MPMX19_02393	0.26	-2.1
2,516,615	+		MPMX19_02393	0.26	-1.4
2,516,615	+		MPMX19_02393	0.26	-2.2
2,516,615	+		MPMX19_02393	0.26	-0.6
2,516,615	+		MPMX19_02393	0.26	+0.2
2,516,616	-		MPMX19_02393	0.26	-0.2
2,516,616	-		MPMX19_02393	0.26	-0.9
2,516,616	-		MPMX19_02393	0.26	+0.1
2,516,616	-		MPMX19_02393	0.26	+0.2
2,516,616	-		MPMX19_02393	0.26	+0.1
2,516,616	-		MPMX19_02393	0.26	-0.6
2,516,616	-		MPMX19_02393	0.26	-0.6
2,516,616	-		MPMX19_02393	0.26	+0.2
2,516,924	+				-0.5
2,516,924	+				-2.2
2,516,924	+				-1.9
2,516,925	-				-0.8
2,516,936	+				-0.8
2,516,936	+				-0.5
2,516,936	+				-0.4
2,516,937	-				-0.3
2,516,937	-				+1.2
2,516,937	-				-0.3
2,517,016	-				+0.3
2,517,022	+				+1.1
2,517,022	+				-1.3
2,517,022	+				-1.2
2,517,022	+				-2.2
2,517,022	+				-0.5
2,517,022	+				+0.6
2,517,022	+				+1.5
2,517,022	+				+0.5
2,517,022	+				-0.5
2,517,022	+				-3.0
2,517,022	+				-1.1
2,517,022	+				-1.1
2,517,022	+				+0.1
2,517,022	+				-1.8
2,517,022	+				-0.4
2,517,022	+				+0.5
2,517,022	+				+1.3
2,517,022	+				-0.6
2,517,022	+				+1.1
2,517,022	+				-0.1
2,517,022	+				+0.8
2,517,022	+				-1.1
2,517,022	+				+0.0
2,517,022	+				-0.1
2,517,022	+				+0.2
2,517,023	-				-0.8
2,517,023	-				-1.1
2,517,023	-				-0.6
2,517,023	-				+0.4
2,517,023	-				-0.6
2,517,023	-				-0.9
2,517,023	-				+0.5
2,517,023	-				+0.5
2,517,023	-				-1.4
2,517,023	-				+0.4
2,517,023	-				-0.4
2,517,023	-				-0.3
2,517,023	-				-1.3
2,517,023	-				+0.5
2,517,023	-				-2.4
2,517,023	-				-0.4
2,517,023	-				-1.9
2,517,023	-				-1.0
2,517,023	-				-1.3
2,517,023	-				+0.0
2,517,023	-				+0.3
2,517,023	-				-0.9
2,517,023	-				-2.1
2,517,023	-				+0.5
2,517,023	-				-1.1
2,517,023	-				-0.1
2,517,073	+				+0.4
2,517,073	+				+0.2
2,517,220	+		MPMX19_02394	0.18	-0.1
2,517,220	+		MPMX19_02394	0.18	-0.2
2,517,220	+		MPMX19_02394	0.18	-0.3
2,517,220	+		MPMX19_02394	0.18	-0.4
2,517,220	+		MPMX19_02394	0.18	+1.1
2,517,220	+		MPMX19_02394	0.18	+0.1
2,517,220	+		MPMX19_02394	0.18	-0.6
2,517,220	+		MPMX19_02394	0.18	-0.1
2,517,220	+		MPMX19_02394	0.18	-1.5
2,517,221	-		MPMX19_02394	0.18	+0.4
2,517,221	-		MPMX19_02394	0.18	-0.8
2,517,221	-		MPMX19_02394	0.18	-1.2
2,517,221	-		MPMX19_02394	0.18	+1.1
2,517,221	-		MPMX19_02394	0.18	-0.5
2,517,221	-		MPMX19_02394	0.18	+0.8
2,517,221	-		MPMX19_02394	0.18	+0.9
2,517,221	-		MPMX19_02394	0.18	-0.8
2,517,221	-		MPMX19_02394	0.18	-1.7
2,517,221	-		MPMX19_02394	0.18	-1.2
2,517,221	-		MPMX19_02394	0.18	-1.4
2,517,221	-		MPMX19_02394	0.18	-0.7
2,517,221	-		MPMX19_02394	0.18	-0.3
2,517,221	-		MPMX19_02394	0.18	-0.6
2,517,221	-		MPMX19_02394	0.18	+0.1
2,517,268	+		MPMX19_02394	0.22	-0.5
2,517,268	+		MPMX19_02394	0.22	+0.9
2,517,268	+		MPMX19_02394	0.22	+1.2
2,517,268	+		MPMX19_02394	0.22	+0.4
2,517,268	+		MPMX19_02394	0.22	+0.5
2,517,268	+		MPMX19_02394	0.22	-0.2
2,517,268	+		MPMX19_02394	0.22	-1.0
2,517,268	+		MPMX19_02394	0.22	-2.6
2,517,268	+		MPMX19_02394	0.22	-1.3
2,517,268	+		MPMX19_02394	0.22	-0.3
2,517,268	+		MPMX19_02394	0.22	-0.6
2,517,268	+		MPMX19_02394	0.22	-1.4
2,517,268	+		MPMX19_02394	0.22	+0.5
2,517,268	+		MPMX19_02394	0.22	+0.5
2,517,268	+		MPMX19_02394	0.22	-1.1
2,517,268	+		MPMX19_02394	0.22	-1.1
2,517,268	+		MPMX19_02394	0.22	-0.2
2,517,268	+		MPMX19_02394	0.22	+0.3
2,517,268	+		MPMX19_02394	0.22	-0.7
2,517,268	+		MPMX19_02394	0.22	-0.6
2,517,268	+		MPMX19_02394	0.22	-0.2
2,517,268	+		MPMX19_02394	0.22	+0.7
2,517,268	+		MPMX19_02394	0.22	-0.1
2,517,268	+		MPMX19_02394	0.22	+0.4
2,517,269	-		MPMX19_02394	0.22	-0.4
2,517,269	-		MPMX19_02394	0.22	+1.5
2,517,269	-		MPMX19_02394	0.22	+0.3
2,517,269	-		MPMX19_02394	0.22	-0.7
2,517,269	-		MPMX19_02394	0.22	-0.5
2,517,269	-		MPMX19_02394	0.22	-1.5
2,517,269	-		MPMX19_02394	0.22	-0.9
2,517,269	-		MPMX19_02394	0.22	+0.3
2,517,269	-		MPMX19_02394	0.22	+0.2
2,517,269	-		MPMX19_02394	0.22	-0.1
2,517,269	-		MPMX19_02394	0.22	+0.5
2,517,269	-		MPMX19_02394	0.22	-0.2
2,517,269	-		MPMX19_02394	0.22	+0.9
2,517,269	-		MPMX19_02394	0.22	-0.2
2,517,269	-		MPMX19_02394	0.22	+0.6
2,517,269	-		MPMX19_02394	0.22	+0.3
2,517,269	-		MPMX19_02394	0.22	+1.9
2,517,269	-		MPMX19_02394	0.22	-2.2
2,517,269	-		MPMX19_02394	0.22	+0.2
2,517,269	-		MPMX19_02394	0.22	-1.3
2,517,269	-		MPMX19_02394	0.22	+1.5
2,517,269	-		MPMX19_02394	0.22	-0.6
2,517,269	-		MPMX19_02394	0.22	+0.5
2,517,269	-		MPMX19_02394	0.22	-0.6
2,517,269	-		MPMX19_02394	0.22	+0.9
2,517,269	-		MPMX19_02394	0.22	-0.4
2,517,269	-		MPMX19_02394	0.22	+0.2
2,517,269	-		MPMX19_02394	0.22	-0.4
2,517,269	-		MPMX19_02394	0.22	-0.4
2,517,269	-		MPMX19_02394	0.22	-0.2
2,517,269	-		MPMX19_02394	0.22	-2.1
2,517,269	-		MPMX19_02394	0.22	-0.1
2,517,269	-		MPMX19_02394	0.22	+1.2
2,517,269	-		MPMX19_02394	0.22	-0.2
2,517,269	-		MPMX19_02394	0.22	+0.1
2,517,269	-		MPMX19_02394	0.22	-0.1
2,517,269	-		MPMX19_02394	0.22	+0.2
2,517,269	-		MPMX19_02394	0.22	-0.8
2,517,269	-		MPMX19_02394	0.22	-0.2
2,517,269	-		MPMX19_02394	0.22	-0.1
2,517,269	-		MPMX19_02394	0.22	+0.5
2,517,269	-		MPMX19_02394	0.22	-1.2
2,517,269	-		MPMX19_02394	0.22	-1.0
2,517,269	-		MPMX19_02394	0.22	+1.2
2,517,364	+		MPMX19_02394	0.31	-0.7
2,517,364	+		MPMX19_02394	0.31	+0.2
2,517,364	+		MPMX19_02394	0.31	-0.3
2,517,364	+		MPMX19_02394	0.31	+0.3
2,517,364	+		MPMX19_02394	0.31	-1.8
2,517,364	+		MPMX19_02394	0.31	-0.7
2,517,364	+		MPMX19_02394	0.31	+0.9
2,517,364	+		MPMX19_02394	0.31	-0.3
2,517,364	+		MPMX19_02394	0.31	-0.1
2,517,364	+		MPMX19_02394	0.31	-0.1
2,517,364	+		MPMX19_02394	0.31	+0.2
2,517,364	+		MPMX19_02394	0.31	-0.5
2,517,364	+		MPMX19_02394	0.31	-1.9
2,517,364	+		MPMX19_02394	0.31	+0.4
2,517,364	+		MPMX19_02394	0.31	+0.1
2,517,364	+		MPMX19_02394	0.31	-0.9
2,517,364	+		MPMX19_02394	0.31	-0.3
2,517,364	+		MPMX19_02394	0.31	+1.3
2,517,365	-		MPMX19_02394	0.31	+0.8
2,517,365	-		MPMX19_02394	0.31	-1.1
2,517,365	-		MPMX19_02394	0.31	+1.7
2,517,365	-		MPMX19_02394	0.31	-0.5
2,517,365	-		MPMX19_02394	0.31	+0.2
2,517,365	-		MPMX19_02394	0.31	-2.3
2,517,365	-		MPMX19_02394	0.31	+1.1
2,517,365	-		MPMX19_02394	0.31	-0.5
2,517,365	-		MPMX19_02394	0.31	-0.6
2,517,365	-		MPMX19_02394	0.31	-0.8
2,517,365	-		MPMX19_02394	0.31	-0.5
2,517,365	-		MPMX19_02394	0.31	+0.4
2,517,365	-		MPMX19_02394	0.31	+0.3
2,517,365	-		MPMX19_02394	0.31	-0.3
2,517,365	-		MPMX19_02394	0.31	-2.1
2,517,365	-		MPMX19_02394	0.31	-0.4
2,517,365	-		MPMX19_02394	0.31	-1.4
2,517,365	-		MPMX19_02394	0.31	+0.5
2,517,478	+		MPMX19_02394	0.41	+0.1
2,517,478	+		MPMX19_02394	0.41	+0.0
2,517,478	+		MPMX19_02394	0.41	-0.5
2,517,478	+		MPMX19_02394	0.41	+1.5
2,517,478	+		MPMX19_02394	0.41	+2.5
2,517,478	+		MPMX19_02394	0.41	-0.9
2,517,478	+		MPMX19_02394	0.41	+0.1
2,517,478	+		MPMX19_02394	0.41	+0.6
2,517,479	-		MPMX19_02394	0.41	+0.9
2,517,479	-		MPMX19_02394	0.41	-0.6
2,517,479	-		MPMX19_02394	0.41	-0.6
2,517,479	-		MPMX19_02394	0.41	-0.8
2,517,479	-		MPMX19_02394	0.41	+0.1
2,517,479	-		MPMX19_02394	0.41	-0.1
2,517,479	-		MPMX19_02394	0.41	-0.5
2,517,479	-		MPMX19_02394	0.41	-0.7
2,517,479	-		MPMX19_02394	0.41	-0.2
2,517,479	-		MPMX19_02394	0.41	-0.1
2,517,601	+		MPMX19_02394	0.52	-0.1
2,517,602	-		MPMX19_02394	0.52	+0.7
2,517,602	-		MPMX19_02394	0.52	-0.6
2,517,602	-		MPMX19_02394	0.52	-1.6
2,517,602	-		MPMX19_02394	0.52	-0.7
2,517,602	-		MPMX19_02394	0.52	-0.9