Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02206

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,307,601	+				+0.4
2,307,601	+				-1.9
2,307,602	-				+0.1
2,307,602	-				+0.8
2,307,806	+				-0.4
2,307,806	+				-1.0
2,307,806	+				-0.5
2,307,806	+				-1.0
2,307,806	+				-0.1
2,307,806	+				-1.3
2,307,806	+				-1.3
2,307,806	+				-0.5
2,307,806	+				+0.3
2,307,806	+				-1.1
2,307,806	+				-0.2
2,307,806	+				-0.1
2,307,806	+				-0.8
2,307,806	+				-2.2
2,307,806	+				+0.1
2,307,806	+				-0.6
2,307,806	+				+0.5
2,307,806	+				+1.0
2,307,806	+				-0.8
2,307,806	+				-0.6
2,307,806	+				-0.4
2,307,806	+				+0.6
2,307,806	+				-0.6
2,307,807	-				-0.4
2,307,807	-				+0.2
2,307,807	-				-1.5
2,307,807	-				-0.8
2,307,807	-				-0.3
2,307,807	-				-2.4
2,307,807	-				-1.8
2,307,807	-				-0.4
2,307,807	-				-3.1
2,307,807	-				+0.0
2,307,807	-				+0.1
2,307,807	-				+1.1
2,307,807	-				+0.7
2,307,807	-				-0.2
2,307,807	-				-1.8
2,307,807	-				+0.3
2,307,807	-				-0.1
2,307,807	-				-0.7
2,307,807	-				-0.1
2,307,807	-				+1.0
2,307,857	+				+0.1
2,307,857	+				-1.2
2,307,857	+				-0.0
2,307,857	+				-1.0
2,307,857	+				-0.1
2,307,857	+				-0.8
2,307,857	+				-0.7
2,307,857	+				+0.0
2,307,857	+				-1.2
2,307,857	+				-0.1
2,307,857	+				+0.7
2,307,857	+				-0.3
2,307,857	+				+0.4
2,307,857	+				-0.5
2,307,857	+				+0.4
2,307,857	+				+0.8
2,307,857	+				+1.2
2,307,858	-				-1.0
2,307,858	-				+0.4
2,307,858	-				-0.5
2,307,858	-				-1.8
2,307,858	-				-1.1
2,307,858	-				-0.5
2,307,858	-				+0.2
2,307,858	-				-2.5
2,307,858	-				+0.8
2,308,097	+		MPMX19_02205	0.45	-2.0
2,308,097	+		MPMX19_02205	0.45	-0.0
2,308,097	+		MPMX19_02205	0.45	-1.3
2,308,097	+		MPMX19_02205	0.45	+1.2
2,308,097	+		MPMX19_02205	0.45	+0.7
2,308,097	+		MPMX19_02205	0.45	-0.7
2,308,097	+		MPMX19_02205	0.45	-2.1
2,308,097	+		MPMX19_02205	0.45	-0.8
2,308,098	-		MPMX19_02205	0.45	-0.8
2,308,098	-		MPMX19_02205	0.45	+1.1
2,308,098	-		MPMX19_02205	0.45	-1.7
2,308,098	-		MPMX19_02205	0.45	+0.4
2,308,098	-		MPMX19_02205	0.45	-0.5
2,308,098	-		MPMX19_02205	0.45	-1.0
2,308,098	-		MPMX19_02205	0.45	-1.2
2,308,098	-		MPMX19_02205	0.45	-0.1
2,308,098	-		MPMX19_02205	0.45	-0.8
2,308,130	+		MPMX19_02205	0.50	-0.1
2,308,131	-		MPMX19_02205	0.50	-0.6
2,308,140	+		MPMX19_02205	0.51	+0.4
2,308,141	-		MPMX19_02205	0.52	-0.5
2,308,234	+		MPMX19_02205	0.66	-1.1
2,308,234	+		MPMX19_02205	0.66	-1.3
2,308,234	+		MPMX19_02205	0.66	-1.7
2,308,234	+		MPMX19_02205	0.66	-1.3
2,308,234	+		MPMX19_02205	0.66	-1.2
2,308,234	+		MPMX19_02205	0.66	-2.1
2,308,234	+		MPMX19_02205	0.66	-0.3
2,308,235	-		MPMX19_02205	0.66	+0.2
2,308,235	-		MPMX19_02205	0.66	-0.1
2,308,235	-		MPMX19_02205	0.66	-1.1
2,308,235	-		MPMX19_02205	0.66	-0.2
2,308,235	-		MPMX19_02205	0.66	-0.9
2,308,235	-		MPMX19_02205	0.66	-0.8
2,308,235	-		MPMX19_02205	0.66	-0.9
2,308,235	-		MPMX19_02205	0.66	+1.9
2,308,235	-		MPMX19_02205	0.66	+0.2
2,308,313	+		MPMX19_02205	0.78	-0.5
2,308,313	+		MPMX19_02205	0.78	-0.4
2,308,313	+		MPMX19_02205	0.78	-1.2
2,308,313	+		MPMX19_02205	0.78	-0.7
2,308,314	-		MPMX19_02205	0.78	+1.1
2,308,383	+		MPMX19_02205	0.89	+0.4
2,308,383	+		MPMX19_02205	0.89	-0.8
2,308,383	+		MPMX19_02205	0.89	-0.4
2,308,383	+		MPMX19_02205	0.89	+0.6
2,308,383	+		MPMX19_02205	0.89	-0.6
2,308,383	+		MPMX19_02205	0.89	-0.5
2,308,383	+		MPMX19_02205	0.89	+0.5
2,308,383	+		MPMX19_02205	0.89	-0.8
2,308,383	+		MPMX19_02205	0.89	-1.1
2,308,383	+		MPMX19_02205	0.89	+1.7
2,308,383	+		MPMX19_02205	0.89	-0.7
2,308,384	-		MPMX19_02205	0.89	-0.7
2,308,384	-		MPMX19_02205	0.89	-1.2
2,308,384	-		MPMX19_02205	0.89	-0.3
2,308,384	-		MPMX19_02205	0.89	-0.7
2,308,384	-		MPMX19_02205	0.89	-0.2
2,308,384	-		MPMX19_02205	0.89	+0.3
2,308,384	-		MPMX19_02205	0.89	-1.1
2,308,478	+				-1.0
2,308,479	+				-0.8
2,308,479	+				-1.2
2,308,479	+				-1.0
2,308,479	+				-0.5
2,308,479	+				-0.7
2,308,480	-				-0.7
2,308,480	-				+0.1
2,308,480	-				-0.8
2,308,480	-				+0.1
2,308,480	-				-2.4
2,308,480	-				-1.2
2,308,486	-				-0.2
2,308,496	+				+0.0
2,308,496	+				-1.3
2,308,496	+				+0.5
2,308,496	+				-0.2
2,308,497	-				-1.7
2,308,497	-				-0.1
2,308,497	-				-0.2
2,308,659	+		MPMX19_02206	0.10	-0.9
2,308,660	-		MPMX19_02206	0.10	-1.5
2,308,660	-		MPMX19_02206	0.10	-0.4
2,308,660	-		MPMX19_02206	0.10	-0.2
2,308,660	-		MPMX19_02206	0.10	-0.8
2,308,660	-		MPMX19_02206	0.10	+0.7
2,308,660	-		MPMX19_02206	0.10	-0.8
2,308,660	-		MPMX19_02206	0.10	-1.3
2,308,660	-		MPMX19_02206	0.10	-0.6
2,308,660	-		MPMX19_02206	0.10	-0.3
2,308,815	+		MPMX19_02206	0.28	-1.6
2,308,815	+		MPMX19_02206	0.28	-1.7
2,308,815	+		MPMX19_02206	0.28	+1.7
2,308,815	+		MPMX19_02206	0.28	-0.1
2,308,815	+		MPMX19_02206	0.28	-0.2
2,308,815	+		MPMX19_02206	0.28	-0.2
2,308,815	+		MPMX19_02206	0.28	-2.4
2,308,815	+		MPMX19_02206	0.28	+0.7
2,308,815	+		MPMX19_02206	0.28	-0.3
2,308,815	+		MPMX19_02206	0.28	+0.8
2,308,816	-		MPMX19_02206	0.28	+0.3
2,308,816	-		MPMX19_02206	0.28	-0.4
2,308,816	-		MPMX19_02206	0.28	-0.3
2,308,816	-		MPMX19_02206	0.28	-1.3
2,308,816	-		MPMX19_02206	0.28	+1.1
2,308,816	-		MPMX19_02206	0.28	-0.5
2,308,816	-		MPMX19_02206	0.28	-0.1
2,308,816	-		MPMX19_02206	0.28	-1.2
2,308,816	-		MPMX19_02206	0.28	-0.5
2,308,816	-		MPMX19_02206	0.28	-0.3
2,308,816	-		MPMX19_02206	0.28	-1.3
2,308,956	+		MPMX19_02206	0.43	-1.0
2,308,956	+		MPMX19_02206	0.43	-0.5
2,308,956	+		MPMX19_02206	0.43	+0.9
2,308,956	+		MPMX19_02206	0.43	+0.0
2,308,956	+		MPMX19_02206	0.43	-0.4
2,308,956	+		MPMX19_02206	0.43	-0.2
2,308,956	+		MPMX19_02206	0.43	+0.6
2,308,956	+		MPMX19_02206	0.43	+0.6
2,308,956	+		MPMX19_02206	0.43	-0.3
2,308,957	-		MPMX19_02206	0.43	-0.9
2,308,957	-		MPMX19_02206	0.43	-1.0
2,308,957	-		MPMX19_02206	0.43	-0.3
2,308,957	-		MPMX19_02206	0.43	+0.3
2,308,957	-		MPMX19_02206	0.43	+1.3
2,308,957	-		MPMX19_02206	0.43	-2.8
2,309,181	+		MPMX19_02206	0.68	-0.8
2,309,181	+		MPMX19_02206	0.68	+0.3
2,309,181	+		MPMX19_02206	0.68	+2.0
2,309,181	+		MPMX19_02206	0.68	+0.3
2,309,181	+		MPMX19_02206	0.68	-0.4
2,309,181	+		MPMX19_02206	0.68	+0.7
2,309,181	+		MPMX19_02206	0.68	+0.3
2,309,181	+		MPMX19_02206	0.68	-0.5
2,309,181	+		MPMX19_02206	0.68	+0.1
2,309,181	+		MPMX19_02206	0.68	-0.5
2,309,182	-		MPMX19_02206	0.68	+0.9
2,309,182	-		MPMX19_02206	0.68	-1.5
2,309,182	-		MPMX19_02206	0.68	-0.1
2,309,376	+		MPMX19_02206	0.89	+0.9
2,309,485	-				-0.2
2,309,485	-				+0.5
2,309,520	+				+1.1
2,309,520	+				-0.2
2,309,520	+				+2.1
2,309,520	+				-1.3
2,309,521	-				-0.5
2,309,521	-				-2.7
2,309,521	-				+0.8
2,309,521	-				-0.1
2,309,521	-				-0.3
2,309,521	-				+0.7
2,309,521	-				-0.5
2,309,521	-				+0.2
2,309,521	-				+0.8
2,309,539	-				-0.3
2,309,551	+				+0.9
2,309,551	+				-1.4
2,309,552	-				-1.2
2,309,552	-				-0.1
2,309,570	+				-0.1
2,309,570	+				-1.0
2,309,571	-				+0.3
2,309,571	-				-1.7
2,309,571	-				+1.2
2,309,571	-				+0.0
2,309,571	-				-0.6
2,309,571	-				+0.4
2,309,571	-				-1.1
2,310,119	+		MPMX19_02207	0.85	-1.3
2,310,119	+		MPMX19_02207	0.85	-1.3
2,310,137	+		MPMX19_02207	0.88	-0.3
2,310,138	-		MPMX19_02207	0.88	-1.3
2,310,138	-		MPMX19_02207	0.88	-1.8
2,310,138	-		MPMX19_02207	0.88	-0.6
2,310,138	-		MPMX19_02207	0.88	-1.7
2,310,138	-		MPMX19_02207	0.88	-1.0
2,310,138	-		MPMX19_02207	0.88	-2.0