Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02171

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,270,223	-		MPMX19_02170	0.13	-0.3
2,270,234	+		MPMX19_02170	0.14	-0.1
2,270,234	+		MPMX19_02170	0.14	-0.3
2,270,234	+		MPMX19_02170	0.14	+0.0
2,270,234	+		MPMX19_02170	0.14	-0.2
2,270,234	+		MPMX19_02170	0.14	-1.7
2,270,234	+		MPMX19_02170	0.14	-0.2
2,270,234	+		MPMX19_02170	0.14	-0.5
2,270,235	-		MPMX19_02170	0.14	+1.2
2,270,235	-		MPMX19_02170	0.14	-0.1
2,270,235	-		MPMX19_02170	0.14	-0.6
2,270,235	-		MPMX19_02170	0.14	-1.5
2,270,235	-		MPMX19_02170	0.14	+0.5
2,270,235	-		MPMX19_02170	0.14	+1.2
2,270,235	-		MPMX19_02170	0.14	+1.9
2,270,235	-		MPMX19_02170	0.14	+0.5
2,270,235	-		MPMX19_02170	0.14	-0.3
2,270,235	-		MPMX19_02170	0.14	+0.9
2,270,235	-		MPMX19_02170	0.14	-1.1
2,270,235	-		MPMX19_02170	0.14	-2.6
2,270,235	-		MPMX19_02170	0.14	-0.1
2,270,237	+		MPMX19_02170	0.14	+0.2
2,270,237	+		MPMX19_02170	0.14	+0.1
2,270,237	+		MPMX19_02170	0.14	+1.6
2,270,237	+		MPMX19_02170	0.14	-0.6
2,270,237	+		MPMX19_02170	0.14	-0.8
2,270,237	+		MPMX19_02170	0.14	-1.5
2,270,238	-		MPMX19_02170	0.14	-1.6
2,270,238	-		MPMX19_02170	0.14	-0.1
2,270,238	-		MPMX19_02170	0.14	+0.3
2,270,238	-		MPMX19_02170	0.14	-0.6
2,270,238	-		MPMX19_02170	0.14	-1.3
2,270,238	-		MPMX19_02170	0.14	-0.1
2,270,258	+		MPMX19_02170	0.16	-0.0
2,270,258	+		MPMX19_02170	0.16	-0.4
2,270,303	+		MPMX19_02170	0.20	-0.1
2,270,315	+		MPMX19_02170	0.22	+0.4
2,270,315	+		MPMX19_02170	0.22	+0.1
2,270,315	+		MPMX19_02170	0.22	+0.2
2,270,315	+		MPMX19_02170	0.22	-0.8
2,270,315	+		MPMX19_02170	0.22	-0.6
2,270,315	+		MPMX19_02170	0.22	-0.3
2,270,315	+		MPMX19_02170	0.22	-3.1
2,270,316	-		MPMX19_02170	0.22	-1.6
2,270,316	-		MPMX19_02170	0.22	-1.1
2,270,316	-		MPMX19_02170	0.22	-0.5
2,270,316	-		MPMX19_02170	0.22	+0.4
2,270,316	-		MPMX19_02170	0.22	+0.0
2,270,316	-		MPMX19_02170	0.22	+0.3
2,270,316	-		MPMX19_02170	0.22	-1.8
2,270,316	-		MPMX19_02170	0.22	-1.1
2,270,316	-		MPMX19_02170	0.22	+0.2
2,270,316	-		MPMX19_02170	0.22	+0.7
2,270,369	+		MPMX19_02170	0.27	-2.1
2,270,369	+		MPMX19_02170	0.27	+0.3
2,270,370	-		MPMX19_02170	0.27	+0.2
2,270,370	-		MPMX19_02170	0.27	+0.3
2,270,375	+		MPMX19_02170	0.27	-0.8
2,270,376	-		MPMX19_02170	0.27	-1.1
2,270,390	+		MPMX19_02170	0.28	+1.2
2,270,390	+		MPMX19_02170	0.28	-0.9
2,270,390	+		MPMX19_02170	0.28	-2.4
2,270,390	+		MPMX19_02170	0.28	+1.5
2,270,390	+		MPMX19_02170	0.28	+0.8
2,270,390	+		MPMX19_02170	0.28	-0.2
2,270,390	+		MPMX19_02170	0.28	-0.1
2,270,390	+		MPMX19_02170	0.28	-0.7
2,270,390	+		MPMX19_02170	0.28	+0.0
2,270,390	+		MPMX19_02170	0.28	-1.0
2,270,390	+		MPMX19_02170	0.28	+0.1
2,270,390	+		MPMX19_02170	0.28	+0.1
2,270,390	+		MPMX19_02170	0.28	-1.0
2,270,390	+		MPMX19_02170	0.28	-1.3
2,270,390	+		MPMX19_02170	0.28	-2.0
2,270,390	+		MPMX19_02170	0.28	-1.1
2,270,391	-		MPMX19_02170	0.29	-1.3
2,270,391	-		MPMX19_02170	0.29	-1.0
2,270,391	-		MPMX19_02170	0.29	-2.2
2,270,391	-		MPMX19_02170	0.29	-0.2
2,270,391	-		MPMX19_02170	0.29	-0.7
2,270,391	-		MPMX19_02170	0.29	-0.1
2,270,391	-		MPMX19_02170	0.29	-1.8
2,270,391	-		MPMX19_02170	0.29	+0.0
2,270,391	-		MPMX19_02170	0.29	+0.3
2,270,391	-		MPMX19_02170	0.29	-2.4
2,270,391	-		MPMX19_02170	0.29	-1.0
2,270,391	-		MPMX19_02170	0.29	-1.0
2,270,391	-		MPMX19_02170	0.29	-1.3
2,270,391	-		MPMX19_02170	0.29	+0.0
2,270,391	-		MPMX19_02170	0.29	-0.3
2,270,391	-		MPMX19_02170	0.29	-2.0
2,270,391	-		MPMX19_02170	0.29	-0.1
2,270,391	-		MPMX19_02170	0.29	+1.1
2,270,391	-		MPMX19_02170	0.29	-0.5
2,270,483	+		MPMX19_02170	0.37	-0.3
2,270,483	+		MPMX19_02170	0.37	-0.8
2,270,483	+		MPMX19_02170	0.37	-0.5
2,270,483	+		MPMX19_02170	0.37	+0.8
2,270,483	+		MPMX19_02170	0.37	+1.4
2,270,483	+		MPMX19_02170	0.37	-0.7
2,270,483	+		MPMX19_02170	0.37	-1.2
2,270,483	+		MPMX19_02170	0.37	-2.0
2,270,483	+		MPMX19_02170	0.37	-0.5
2,270,484	-		MPMX19_02170	0.37	+0.5
2,270,484	-		MPMX19_02170	0.37	-1.5
2,270,484	-		MPMX19_02170	0.37	-0.2
2,270,484	-		MPMX19_02170	0.37	-0.8
2,270,484	-		MPMX19_02170	0.37	+1.5
2,270,484	-		MPMX19_02170	0.37	-1.1
2,270,484	-		MPMX19_02170	0.37	+0.1
2,270,484	-		MPMX19_02170	0.37	-0.8
2,270,484	-		MPMX19_02170	0.37	+0.3
2,270,484	-		MPMX19_02170	0.37	-0.7
2,270,570	+		MPMX19_02170	0.45	-0.9
2,270,570	+		MPMX19_02170	0.45	+0.8
2,270,571	-		MPMX19_02170	0.45	+0.2
2,270,571	-		MPMX19_02170	0.45	-1.6
2,270,571	-		MPMX19_02170	0.45	-0.8
2,270,571	-		MPMX19_02170	0.45	-0.3
2,270,571	-		MPMX19_02170	0.45	-0.2
2,270,771	+		MPMX19_02170	0.64	-0.1
2,270,771	+		MPMX19_02170	0.64	+0.0
2,270,771	+		MPMX19_02170	0.64	-0.3
2,270,771	+		MPMX19_02170	0.64	-1.6
2,270,771	+		MPMX19_02170	0.64	-1.1
2,270,771	+		MPMX19_02170	0.64	-1.7
2,270,771	+		MPMX19_02170	0.64	-1.5
2,270,771	+		MPMX19_02170	0.64	-0.4
2,270,771	+		MPMX19_02170	0.64	-1.1
2,270,772	-		MPMX19_02170	0.64	+0.9
2,270,772	-		MPMX19_02170	0.64	-0.2
2,270,772	-		MPMX19_02170	0.64	-0.8
2,270,772	-		MPMX19_02170	0.64	+0.5
2,270,772	-		MPMX19_02170	0.64	+0.2
2,270,772	-		MPMX19_02170	0.64	-1.4
2,271,960	+		MPMX19_02171	0.47	-0.5
2,271,960	+		MPMX19_02171	0.47	-1.2
2,271,960	+		MPMX19_02171	0.47	-1.9
2,271,960	+		MPMX19_02171	0.47	-0.8
2,271,961	-		MPMX19_02171	0.47	-1.2
2,271,961	-		MPMX19_02171	0.47	-0.9
2,271,961	-		MPMX19_02171	0.47	-0.4
2,271,961	-		MPMX19_02171	0.47	-2.3
2,271,961	-		MPMX19_02171	0.47	+0.5
2,271,961	-		MPMX19_02171	0.47	-1.1
2,271,961	-		MPMX19_02171	0.47	+0.6
2,271,961	-		MPMX19_02171	0.47	-0.7
2,272,321	-		MPMX19_02171	0.69	-1.3
2,272,321	-		MPMX19_02171	0.69	-1.1
2,272,321	-		MPMX19_02171	0.69	+0.6
2,272,638	+		MPMX19_02171	0.88	+0.1
2,272,638	+		MPMX19_02171	0.88	-0.7
2,272,638	+		MPMX19_02171	0.88	+0.2
2,272,638	+		MPMX19_02171	0.88	+0.5
2,272,638	+		MPMX19_02171	0.88	-0.0
2,272,638	+		MPMX19_02171	0.88	-1.5
2,272,638	+		MPMX19_02171	0.88	-1.2
2,272,638	+		MPMX19_02171	0.88	-1.7
2,272,639	-		MPMX19_02171	0.88	-1.5
2,272,639	-		MPMX19_02171	0.88	+0.2
2,272,639	-		MPMX19_02171	0.88	-0.4
2,272,639	-		MPMX19_02171	0.88	-1.7
2,272,639	-		MPMX19_02171	0.88	-0.9
2,272,639	-		MPMX19_02171	0.88	-0.6
2,272,639	-		MPMX19_02171	0.88	+0.1
2,272,639	-		MPMX19_02171	0.88	-0.6
2,272,639	-		MPMX19_02171	0.88	-0.5
2,272,764	+				-1.9
2,272,764	+				+0.8
2,272,764	+				-0.5
2,272,764	+				-1.0
2,272,764	+				-0.7
2,272,764	+				-1.3
2,272,764	+				-1.0
2,272,764	+				-2.0
2,272,764	+				+0.7
2,272,764	+				-0.1
2,272,764	+				+0.7
2,272,765	-				-0.6
2,272,765	-				-0.8
2,272,765	-				-1.1
2,272,765	-				-2.6
2,272,765	-				+1.5
2,272,765	-				-1.7
2,272,765	-				-1.2
2,272,765	-				+0.9
2,272,765	-				+0.9
2,272,765	-				-0.5
2,272,765	-				+0.3
2,272,765	-				-1.5
2,272,765	-				+0.5
2,272,765	-				-2.0
2,272,765	-				-2.1
2,272,904	+				-0.8
2,272,904	+				+0.0
2,272,905	-				-0.5
2,272,905	-				-0.2
2,272,905	-				+0.3
2,272,914	-				-0.8
2,272,914	-				+0.2
2,272,914	-				-1.4
2,273,117	+				+0.4
2,273,117	+				+0.3
2,273,139	+				-0.3
2,273,140	-				-1.5
2,273,140	-				-0.1
2,273,145	-				-0.2
2,273,343	+		MPMX19_02172	0.16	-0.8
2,273,344	-		MPMX19_02172	0.16	+1.0
2,273,344	-		MPMX19_02172	0.16	-1.5
2,273,344	-		MPMX19_02172	0.16	+0.6
2,273,344	-		MPMX19_02172	0.16	+0.0
2,273,507	+		MPMX19_02172	0.33	-0.4
2,273,507	+		MPMX19_02172	0.33	-1.2
2,273,507	+		MPMX19_02172	0.33	-0.5
2,273,507	+		MPMX19_02172	0.33	+0.5
2,273,507	+		MPMX19_02172	0.33	+0.5
2,273,507	+		MPMX19_02172	0.33	+0.8
2,273,507	+		MPMX19_02172	0.33	+1.8
2,273,507	+		MPMX19_02172	0.33	+0.5
2,273,508	-		MPMX19_02172	0.33	-2.4
2,273,508	-		MPMX19_02172	0.33	-1.3
2,273,508	-		MPMX19_02172	0.33	-1.2
2,273,508	-		MPMX19_02172	0.33	+0.7
2,273,508	-		MPMX19_02172	0.33	-0.3
2,273,508	-		MPMX19_02172	0.33	-0.5