Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02097

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,193,265	+				-0.5
2,193,265	+				-0.3
2,193,266	-				-0.8
2,193,266	-				-1.5
2,193,266	-				-0.1
2,193,266	-				+0.2
2,193,308	+				+0.6
2,193,704	+		MPMX19_02096	0.59	-0.7
2,193,704	+		MPMX19_02096	0.59	+1.2
2,193,704	+		MPMX19_02096	0.59	-1.2
2,193,704	+		MPMX19_02096	0.59	+0.3
2,193,704	+		MPMX19_02096	0.59	-0.5
2,193,704	+		MPMX19_02096	0.59	-0.7
2,193,704	+		MPMX19_02096	0.59	-1.1
2,193,704	+		MPMX19_02096	0.59	-0.8
2,193,704	+		MPMX19_02096	0.59	+0.5
2,193,704	+		MPMX19_02096	0.59	-0.1
2,193,704	+		MPMX19_02096	0.59	+1.0
2,193,704	+		MPMX19_02096	0.59	+0.5
2,193,704	+		MPMX19_02096	0.59	-0.4
2,193,705	-		MPMX19_02096	0.60	+0.5
2,193,705	-		MPMX19_02096	0.60	-1.2
2,193,705	-		MPMX19_02096	0.60	+0.6
2,193,705	-		MPMX19_02096	0.60	-0.0
2,193,705	-		MPMX19_02096	0.60	+0.9
2,193,705	-		MPMX19_02096	0.60	-0.2
2,193,705	-		MPMX19_02096	0.60	-1.1
2,193,705	-		MPMX19_02096	0.60	-0.6
2,193,705	-		MPMX19_02096	0.60	-0.5
2,193,705	-		MPMX19_02096	0.60	+0.4
2,193,705	-		MPMX19_02096	0.60	+0.3
2,193,705	-		MPMX19_02096	0.60	-0.6
2,193,705	-		MPMX19_02096	0.60	+0.1
2,193,705	-		MPMX19_02096	0.60	-1.5
2,193,705	-		MPMX19_02096	0.60	+0.0
2,193,711	+		MPMX19_02096	0.61	-0.1
2,193,711	+		MPMX19_02096	0.61	+0.7
2,193,712	-		MPMX19_02096	0.61	-0.1
2,193,781	+		MPMX19_02096	0.74	-2.5
2,193,781	+		MPMX19_02096	0.74	+0.5
2,193,781	+		MPMX19_02096	0.74	-0.1
2,193,781	+		MPMX19_02096	0.74	-2.0
2,193,781	+		MPMX19_02096	0.74	-0.0
2,193,781	+		MPMX19_02096	0.74	-0.5
2,193,781	+		MPMX19_02096	0.74	-1.1
2,193,782	-		MPMX19_02096	0.74	-0.1
2,193,782	-		MPMX19_02096	0.74	+0.2
2,193,858	+		MPMX19_02096	0.88	-1.5
2,193,858	+		MPMX19_02096	0.88	+0.1
2,193,858	+		MPMX19_02096	0.88	-0.6
2,193,858	+		MPMX19_02096	0.88	-0.4
2,193,858	+		MPMX19_02096	0.88	-0.7
2,193,859	-		MPMX19_02096	0.88	+0.4
2,193,859	-		MPMX19_02096	0.88	-0.7
2,193,859	-		MPMX19_02096	0.88	-0.8
2,193,859	-		MPMX19_02096	0.88	+0.5
2,193,859	-		MPMX19_02096	0.88	+0.8
2,193,859	-		MPMX19_02096	0.88	-0.0
2,193,859	-		MPMX19_02096	0.88	-1.1
2,193,859	-		MPMX19_02096	0.88	-1.7
2,193,921	+				-2.7
2,193,921	+				-1.3
2,193,922	-				+1.1
2,193,922	-				-0.3
2,193,951	+				+0.7
2,193,951	+				-0.3
2,193,951	+				-0.2
2,193,952	-				+0.5
2,193,952	-				+0.1
2,193,952	-				-0.1
2,193,952	-				+0.3
2,193,952	-				-0.1
2,193,952	-				-0.1
2,193,952	-				-0.2
2,193,969	-				-1.1
2,193,969	-				+0.3
2,193,969	-				+0.5
2,194,080	-				-1.7
2,194,080	-				+1.1
2,194,302	+				-0.4
2,194,302	+				-0.7
2,194,302	+				-0.6
2,194,302	+				-0.8
2,194,303	-				+0.2
2,194,303	-				-0.7
2,194,303	-				-0.5
2,194,303	-				-0.6
2,194,530	+		MPMX19_02097	0.20	-0.4
2,194,530	+		MPMX19_02097	0.20	-0.8
2,194,530	+		MPMX19_02097	0.20	-0.4
2,194,530	+		MPMX19_02097	0.20	-0.7
2,194,530	+		MPMX19_02097	0.20	-0.5
2,194,530	+		MPMX19_02097	0.20	-1.5
2,194,530	+		MPMX19_02097	0.20	+0.4
2,194,530	+		MPMX19_02097	0.20	-0.7
2,194,530	+		MPMX19_02097	0.20	+0.3
2,194,530	+		MPMX19_02097	0.20	-1.3
2,194,530	+		MPMX19_02097	0.20	-0.6
2,194,530	+		MPMX19_02097	0.20	-0.2
2,194,530	+		MPMX19_02097	0.20	-0.3
2,194,530	+		MPMX19_02097	0.20	-0.2
2,194,530	+		MPMX19_02097	0.20	+1.2
2,194,530	+		MPMX19_02097	0.20	-0.3
2,194,530	+		MPMX19_02097	0.20	+0.9
2,194,531	-		MPMX19_02097	0.20	-0.8
2,194,531	-		MPMX19_02097	0.20	+0.5
2,194,531	-		MPMX19_02097	0.20	-0.7
2,194,531	-		MPMX19_02097	0.20	-1.0
2,194,531	-		MPMX19_02097	0.20	+0.5
2,194,531	-		MPMX19_02097	0.20	-0.5
2,194,531	-		MPMX19_02097	0.20	-0.3
2,194,531	-		MPMX19_02097	0.20	+0.7
2,194,531	-		MPMX19_02097	0.20	+1.2
2,194,531	-		MPMX19_02097	0.20	+0.5
2,195,223	+		MPMX19_02097	0.66	-0.2
2,195,223	+		MPMX19_02097	0.66	-2.1
2,195,223	+		MPMX19_02097	0.66	-0.8
2,195,223	+		MPMX19_02097	0.66	-0.2
2,195,223	+		MPMX19_02097	0.66	+0.5
2,195,223	+		MPMX19_02097	0.66	+0.4
2,195,223	+		MPMX19_02097	0.66	-0.4
2,195,223	+		MPMX19_02097	0.66	+0.1
2,195,223	+		MPMX19_02097	0.66	-1.2
2,195,223	+		MPMX19_02097	0.66	-0.5
2,195,224	-		MPMX19_02097	0.66	+0.6
2,195,224	-		MPMX19_02097	0.66	+0.9
2,195,224	-		MPMX19_02097	0.66	-0.8
2,195,224	-		MPMX19_02097	0.66	-0.4
2,195,224	-		MPMX19_02097	0.66	-1.8
2,195,224	-		MPMX19_02097	0.66	-0.4
2,195,224	-		MPMX19_02097	0.66	+0.8
2,195,224	-		MPMX19_02097	0.66	-1.7
2,195,224	-		MPMX19_02097	0.66	-0.1
2,195,227	+		MPMX19_02097	0.66	+1.1
2,195,227	+		MPMX19_02097	0.66	+1.7
2,195,227	+		MPMX19_02097	0.66	-0.1
2,195,227	+		MPMX19_02097	0.66	+0.9
2,195,227	+		MPMX19_02097	0.66	+0.9
2,195,227	+		MPMX19_02097	0.66	-0.8
2,195,227	+		MPMX19_02097	0.66	-0.2
2,195,227	+		MPMX19_02097	0.66	-2.1
2,195,227	+		MPMX19_02097	0.66	-1.3
2,195,227	+		MPMX19_02097	0.66	-2.3
2,195,227	+		MPMX19_02097	0.66	+0.4
2,195,227	+		MPMX19_02097	0.66	+0.8
2,195,227	+		MPMX19_02097	0.66	+1.8
2,195,227	+		MPMX19_02097	0.66	+0.0
2,195,227	+		MPMX19_02097	0.66	-1.0
2,195,227	+		MPMX19_02097	0.66	+1.0
2,195,227	+		MPMX19_02097	0.66	-0.3
2,195,227	+		MPMX19_02097	0.66	-1.3
2,195,227	+		MPMX19_02097	0.66	-0.8
2,195,227	+		MPMX19_02097	0.66	-0.3
2,195,228	-		MPMX19_02097	0.66	+0.6
2,195,228	-		MPMX19_02097	0.66	-1.0
2,195,228	-		MPMX19_02097	0.66	-0.9
2,195,228	-		MPMX19_02097	0.66	-0.3
2,195,228	-		MPMX19_02097	0.66	-2.1
2,195,228	-		MPMX19_02097	0.66	-0.3
2,195,228	-		MPMX19_02097	0.66	-0.5
2,195,228	-		MPMX19_02097	0.66	+0.1
2,195,228	-		MPMX19_02097	0.66	-0.3
2,195,228	-		MPMX19_02097	0.66	+2.5
2,195,228	-		MPMX19_02097	0.66	-0.4
2,195,228	-		MPMX19_02097	0.66	-0.1
2,195,228	-		MPMX19_02097	0.66	+0.3
2,195,228	-		MPMX19_02097	0.66	-1.1
2,195,228	-		MPMX19_02097	0.66	-0.1
2,195,228	-		MPMX19_02097	0.66	-0.5
2,195,228	-		MPMX19_02097	0.66	+0.4
2,195,228	-		MPMX19_02097	0.66	-1.0
2,195,304	+		MPMX19_02097	0.72	-1.7
2,195,304	+		MPMX19_02097	0.72	+2.2
2,195,304	+		MPMX19_02097	0.72	-1.5
2,195,305	-		MPMX19_02097	0.72	-0.5
2,195,364	+		MPMX19_02097	0.76	+0.2
2,195,364	+		MPMX19_02097	0.76	+0.5
2,195,364	+		MPMX19_02097	0.76	+0.2
2,195,364	+		MPMX19_02097	0.76	-0.4
2,195,365	-		MPMX19_02097	0.76	+1.5
2,195,365	-		MPMX19_02097	0.76	-0.3
2,195,365	-		MPMX19_02097	0.76	-1.0
2,195,365	-		MPMX19_02097	0.76	+2.1
2,195,365	-		MPMX19_02097	0.76	+0.8
2,195,886	+		MPMX19_02098	0.12	+1.1
2,195,887	-		MPMX19_02098	0.12	-1.3
2,195,887	-		MPMX19_02098	0.12	-0.8
2,195,945	+		MPMX19_02098	0.21	+0.6
2,195,945	+		MPMX19_02098	0.21	-0.1
2,195,945	+		MPMX19_02098	0.21	-1.8
2,195,945	+		MPMX19_02098	0.21	+0.2
2,195,945	+		MPMX19_02098	0.21	+1.2
2,195,945	+		MPMX19_02098	0.21	+0.8
2,195,945	+		MPMX19_02098	0.21	-0.3
2,195,945	+		MPMX19_02098	0.21	-0.1
2,195,945	+		MPMX19_02098	0.21	-0.7
2,195,945	+		MPMX19_02098	0.21	-0.3
2,195,945	+		MPMX19_02098	0.21	-0.3
2,195,945	+		MPMX19_02098	0.21	-0.0
2,195,945	+		MPMX19_02098	0.21	-0.2
2,195,945	+		MPMX19_02098	0.21	-1.0
2,195,946	+		MPMX19_02098	0.21	-1.4
2,195,946	-		MPMX19_02098	0.21	+0.4
2,195,946	-		MPMX19_02098	0.21	-1.1
2,195,946	-		MPMX19_02098	0.21	-0.2
2,195,946	-		MPMX19_02098	0.21	-1.3
2,195,946	-		MPMX19_02098	0.21	+0.4
2,195,946	-		MPMX19_02098	0.21	-0.8
2,195,946	-		MPMX19_02098	0.21	-1.6
2,195,946	-		MPMX19_02098	0.21	-0.3
2,195,946	-		MPMX19_02098	0.21	-0.8
2,195,946	-		MPMX19_02098	0.21	+0.6
2,195,946	-		MPMX19_02098	0.21	-0.3
2,195,946	-		MPMX19_02098	0.21	-0.8
2,195,951	+		MPMX19_02098	0.22	-0.3
2,195,951	+		MPMX19_02098	0.22	-0.0
2,195,951	+		MPMX19_02098	0.22	+1.1
2,195,951	+		MPMX19_02098	0.22	-1.0
2,195,951	+		MPMX19_02098	0.22	-0.4
2,195,951	+		MPMX19_02098	0.22	-0.1
2,195,951	+		MPMX19_02098	0.22	+0.2
2,195,952	-		MPMX19_02098	0.22	-1.0
2,195,952	-		MPMX19_02098	0.22	+0.9
2,195,952	-		MPMX19_02098	0.22	-2.7
2,195,952	-		MPMX19_02098	0.22	+0.9
2,195,952	-		MPMX19_02098	0.22	-1.2
2,195,952	-		MPMX19_02098	0.22	-1.0
2,195,952	-		MPMX19_02098	0.22	-1.3
2,195,987	+		MPMX19_02098	0.28	+0.2
2,195,987	+		MPMX19_02098	0.28	+0.1
2,195,987	+		MPMX19_02098	0.28	+0.5
2,195,987	+		MPMX19_02098	0.28	+0.2
2,195,987	+		MPMX19_02098	0.28	-2.0
2,195,987	+		MPMX19_02098	0.28	+0.5
2,195,987	+		MPMX19_02098	0.28	-1.4
2,195,987	+		MPMX19_02098	0.28	+0.2
2,195,987	+		MPMX19_02098	0.28	-0.1
2,195,988	-		MPMX19_02098	0.28	-1.0
2,195,988	-		MPMX19_02098	0.28	+0.1
2,196,215	+		MPMX19_02098	0.65	-0.7
2,196,215	+		MPMX19_02098	0.65	+1.5
2,196,215	+		MPMX19_02098	0.65	-1.5
2,196,215	+		MPMX19_02098	0.65	-0.5
2,196,215	+		MPMX19_02098	0.65	+0.1
2,196,215	+		MPMX19_02098	0.65	-1.3
2,196,215	+		MPMX19_02098	0.65	+0.8
2,196,215	+		MPMX19_02098	0.65	-0.6
2,196,215	+		MPMX19_02098	0.65	+0.2
2,196,215	+		MPMX19_02098	0.65	-0.3
2,196,215	+		MPMX19_02098	0.65	-0.2
2,196,215	+		MPMX19_02098	0.65	-0.4
2,196,215	+		MPMX19_02098	0.65	+1.5
2,196,215	+		MPMX19_02098	0.65	-1.5
2,196,215	+		MPMX19_02098	0.65	-0.3
2,196,216	-		MPMX19_02098	0.65	+0.5
2,196,216	-		MPMX19_02098	0.65	-1.3
2,196,216	-		MPMX19_02098	0.65	+0.7
2,196,216	-		MPMX19_02098	0.65	-0.2
2,196,216	-		MPMX19_02098	0.65	-0.2
2,196,216	-		MPMX19_02098	0.65	+0.0
2,196,216	-		MPMX19_02098	0.65	-0.1
2,196,216	-		MPMX19_02098	0.65	-1.5
2,196,216	-		MPMX19_02098	0.65	-0.4
2,196,216	-		MPMX19_02098	0.65	-0.7
2,196,216	-		MPMX19_02098	0.65	-0.5
2,196,216	-		MPMX19_02098	0.65	-0.6
2,196,216	-		MPMX19_02098	0.65	-0.2
2,196,216	-		MPMX19_02098	0.65	-0.8
2,196,216	-		MPMX19_02098	0.65	-1.2
2,196,416	+				-0.5
2,196,416	+				-0.0
2,196,416	+				-0.4
2,196,416	+				+0.5
2,196,417	-				+0.1
2,196,417	-				-0.3
2,196,417	-				-0.3
2,196,417	-				-0.7
2,196,419	+				-1.1
2,196,419	+				-0.1
2,196,419	+				-0.8
2,196,419	+				+0.2
2,196,420	-				-0.9
2,196,420	-				+0.2
2,196,420	-				-1.6
2,196,420	-				-1.0
2,196,470	+				+0.1
2,196,471	-				+0.3
2,196,471	-				+0.1
2,196,471	-				-1.8
2,196,681	+		MPMX19_02099	0.21	-1.4
2,196,681	+		MPMX19_02099	0.21	-1.0
2,196,682	-		MPMX19_02099	0.21	-0.8
2,196,682	-		MPMX19_02099	0.21	+0.4
2,196,682	-		MPMX19_02099	0.21	-1.0
2,196,693	+		MPMX19_02099	0.22	-0.5
2,196,693	+		MPMX19_02099	0.22	-0.7
2,196,693	+		MPMX19_02099	0.22	-1.0
2,196,693	+		MPMX19_02099	0.22	-0.8
2,196,693	+		MPMX19_02099	0.22	-0.1
2,196,694	-		MPMX19_02099	0.22	+0.9
2,196,694	-		MPMX19_02099	0.22	-0.4
2,196,694	-		MPMX19_02099	0.22	-0.8
2,196,708	+		MPMX19_02099	0.24	+0.9
2,196,708	+		MPMX19_02099	0.24	-0.0
2,196,708	+		MPMX19_02099	0.24	-0.2
2,196,708	+		MPMX19_02099	0.24	+0.7
2,196,708	+		MPMX19_02099	0.24	-1.9
2,196,708	+		MPMX19_02099	0.24	-0.4
2,196,708	+		MPMX19_02099	0.24	-1.3
2,196,709	-		MPMX19_02099	0.24	-1.3