Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01984

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
2,065,689	+				-0.2
2,065,690	-				+1.1
2,065,690	-				-0.2
2,065,690	-				-0.5
2,065,690	-				-2.0
2,065,690	-				-1.0
2,066,528	+		MPMX19_01983	0.86	-0.0
2,066,528	+		MPMX19_01983	0.86	+0.4
2,066,528	+		MPMX19_01983	0.86	+0.4
2,066,528	+		MPMX19_01983	0.86	-0.8
2,066,528	+		MPMX19_01983	0.86	-1.2
2,066,528	+		MPMX19_01983	0.86	+0.4
2,066,528	+		MPMX19_01983	0.86	-0.2
2,066,528	+		MPMX19_01983	0.86	+0.3
2,066,528	+		MPMX19_01983	0.86	+1.2
2,066,528	+		MPMX19_01983	0.86	-1.3
2,066,528	+		MPMX19_01983	0.86	-0.3
2,066,528	+		MPMX19_01983	0.86	-0.8
2,066,528	+		MPMX19_01983	0.86	-0.9
2,066,528	+		MPMX19_01983	0.86	+0.0
2,066,529	-		MPMX19_01983	0.86	-1.7
2,066,529	-		MPMX19_01983	0.86	+0.9
2,066,529	-		MPMX19_01983	0.86	+0.0
2,066,529	-		MPMX19_01983	0.86	-0.2
2,066,529	-		MPMX19_01983	0.86	-0.3
2,066,529	-		MPMX19_01983	0.86	+0.1
2,066,529	-		MPMX19_01983	0.86	-0.7
2,066,529	-		MPMX19_01983	0.86	+0.6
2,066,529	-		MPMX19_01983	0.86	+2.2
2,067,036	+		MPMX19_01984	0.50	-1.3
2,067,036	+		MPMX19_01984	0.50	+0.6
2,067,036	+		MPMX19_01984	0.50	+0.1
2,067,036	+		MPMX19_01984	0.50	+0.1
2,067,036	+		MPMX19_01984	0.50	-0.8
2,067,036	+		MPMX19_01984	0.50	-1.0
2,067,037	-		MPMX19_01984	0.50	+0.6
2,067,037	-		MPMX19_01984	0.50	+0.6
2,067,037	-		MPMX19_01984	0.50	-0.3
2,067,037	-		MPMX19_01984	0.50	-1.1
2,067,037	-		MPMX19_01984	0.50	-1.0
2,067,143	+		MPMX19_01984	0.64	-1.3
2,067,143	+		MPMX19_01984	0.64	+0.2
2,067,143	+		MPMX19_01984	0.64	-0.2
2,067,143	+		MPMX19_01984	0.64	-0.5
2,067,144	-		MPMX19_01984	0.64	+0.8
2,067,144	-		MPMX19_01984	0.64	-0.1
2,067,144	-		MPMX19_01984	0.64	+0.8
2,067,144	-		MPMX19_01984	0.64	-1.3
2,067,174	+		MPMX19_01984	0.68	+1.3
2,067,174	+		MPMX19_01984	0.68	+0.5
2,067,175	-		MPMX19_01984	0.68	-0.2
2,067,189	+		MPMX19_01984	0.70	+0.9
2,067,189	+		MPMX19_01984	0.70	-0.1
2,067,189	+		MPMX19_01984	0.70	-1.1
2,067,189	+		MPMX19_01984	0.70	-0.9
2,067,189	+		MPMX19_01984	0.70	+0.2
2,067,189	+		MPMX19_01984	0.70	-1.8
2,067,189	+		MPMX19_01984	0.70	-1.6
2,067,189	+		MPMX19_01984	0.70	+1.0
2,067,189	+		MPMX19_01984	0.70	+0.7
2,067,189	+		MPMX19_01984	0.70	+1.2
2,067,189	+		MPMX19_01984	0.70	+0.8
2,067,189	+		MPMX19_01984	0.70	+0.3
2,067,189	+		MPMX19_01984	0.70	+0.7
2,067,189	+		MPMX19_01984	0.70	-0.1
2,067,189	+		MPMX19_01984	0.70	-1.1
2,067,189	+		MPMX19_01984	0.70	-0.7
2,067,189	+		MPMX19_01984	0.70	-1.3
2,067,189	+		MPMX19_01984	0.70	-0.3
2,067,189	+		MPMX19_01984	0.70	-1.8
2,067,189	+		MPMX19_01984	0.70	-0.2
2,067,190	-		MPMX19_01984	0.70	-0.4
2,067,190	-		MPMX19_01984	0.70	-0.1
2,067,190	-		MPMX19_01984	0.70	-0.4
2,067,190	-		MPMX19_01984	0.70	+0.2
2,067,190	-		MPMX19_01984	0.70	-0.5
2,067,190	-		MPMX19_01984	0.70	+0.9
2,067,190	-		MPMX19_01984	0.70	-0.2
2,067,190	-		MPMX19_01984	0.70	+0.4
2,067,190	-		MPMX19_01984	0.70	-1.0
2,067,190	-		MPMX19_01984	0.70	+0.5
2,067,190	-		MPMX19_01984	0.70	-0.8
2,067,190	-		MPMX19_01984	0.70	+0.5
2,067,190	-		MPMX19_01984	0.70	-0.4
2,067,190	-		MPMX19_01984	0.70	+0.1
2,067,190	-		MPMX19_01984	0.70	-0.4
2,067,190	-		MPMX19_01984	0.70	-0.5
2,067,190	-		MPMX19_01984	0.70	+0.6
2,067,223	-		MPMX19_01984	0.75	-1.1
2,067,276	+		MPMX19_01984	0.82	-0.6
2,067,276	+		MPMX19_01984	0.82	-0.5
2,067,277	-		MPMX19_01984	0.82	-1.1
2,067,277	-		MPMX19_01984	0.82	-0.4
2,067,277	-		MPMX19_01984	0.82	+0.5
2,067,277	-		MPMX19_01984	0.82	+1.3
2,067,306	+		MPMX19_01984	0.86	+0.1
2,067,306	+		MPMX19_01984	0.86	-1.2
2,067,306	+		MPMX19_01984	0.86	+0.4
2,067,306	+		MPMX19_01984	0.86	-0.1
2,067,306	+		MPMX19_01984	0.86	-0.3
2,067,306	+		MPMX19_01984	0.86	+0.4
2,067,306	+		MPMX19_01984	0.86	-0.2
2,067,306	+		MPMX19_01984	0.86	+0.3
2,067,306	+		MPMX19_01984	0.86	-2.1
2,067,306	+		MPMX19_01984	0.86	+0.9
2,067,306	+		MPMX19_01984	0.86	-0.6
2,067,306	+		MPMX19_01984	0.86	+0.7
2,067,306	+		MPMX19_01984	0.86	+0.3
2,067,306	+		MPMX19_01984	0.86	-1.1
2,067,306	+		MPMX19_01984	0.86	+1.0
2,067,306	+		MPMX19_01984	0.86	+0.4
2,067,306	+		MPMX19_01984	0.86	-0.7
2,067,306	+		MPMX19_01984	0.86	-0.7
2,067,306	+		MPMX19_01984	0.86	-0.0
2,067,306	+		MPMX19_01984	0.86	-1.9
2,067,306	+		MPMX19_01984	0.86	-0.4
2,067,306	+		MPMX19_01984	0.86	-1.0
2,067,307	-		MPMX19_01984	0.86	+1.5
2,067,307	-		MPMX19_01984	0.86	-0.4
2,067,307	-		MPMX19_01984	0.86	-0.6
2,067,307	-		MPMX19_01984	0.86	+0.1
2,067,307	-		MPMX19_01984	0.86	+1.1
2,067,307	-		MPMX19_01984	0.86	-0.5
2,067,307	-		MPMX19_01984	0.86	-1.4
2,067,307	-		MPMX19_01984	0.86	+0.2
2,067,307	-		MPMX19_01984	0.86	-1.8
2,067,307	-		MPMX19_01984	0.86	-1.5
2,067,307	-		MPMX19_01984	0.86	-0.6
2,067,307	-		MPMX19_01984	0.86	-0.2
2,067,309	+		MPMX19_01984	0.86	-1.3
2,067,309	+		MPMX19_01984	0.86	+0.2
2,067,309	+		MPMX19_01984	0.86	+0.6
2,067,309	+		MPMX19_01984	0.86	+0.2
2,067,310	-		MPMX19_01984	0.86	-0.8
2,067,310	-		MPMX19_01984	0.86	-0.3
2,067,310	-		MPMX19_01984	0.86	-0.2
2,067,310	-		MPMX19_01984	0.86	+1.1
2,067,432	+				-0.1
2,067,433	-				+0.5
2,067,433	-				-0.3
2,067,451	+				-1.7
2,067,513	+				-0.6
2,067,514	-				+0.0
2,067,514	-				+1.1
2,067,514	-				-0.6
2,067,514	-				+0.6
2,067,514	-				-1.0
2,067,550	+				+0.1
2,067,550	+				-2.3
2,067,550	+				+1.0
2,067,550	+				+0.0
2,067,550	+				-0.6
2,067,550	+				+0.1
2,067,550	+				+0.0
2,067,550	+				-0.3
2,067,550	+				+0.1
2,067,550	+				+0.4
2,067,550	+				-0.6
2,067,550	+				+0.1
2,067,550	+				+0.5
2,067,550	+				+0.4
2,067,550	+				+0.3
2,067,551	-				+0.2
2,067,551	-				-0.2
2,067,551	-				+1.7
2,067,551	-				-0.6
2,067,551	-				+0.6
2,067,551	-				+0.4
2,067,551	-				-1.1
2,067,551	-				-0.0
2,067,551	-				-1.0
2,067,551	-				-0.7
2,067,552	+				+0.1
2,067,552	+				+0.5
2,067,552	+				+0.2
2,067,552	+				+0.8
2,067,552	+				+0.6
2,067,552	+				-0.2
2,067,552	+				+0.2
2,067,552	+				-0.1
2,067,552	+				+0.2
2,067,552	+				+0.5
2,067,552	+				+1.2
2,067,552	+				+1.0
2,067,552	+				-0.4
2,067,552	+				-0.3
2,067,552	+				-0.3
2,067,552	+				-0.5
2,067,552	+				-2.0
2,067,552	+				+0.8
2,067,552	+				-0.2
2,067,552	+				-2.2
2,067,552	+				+0.8
2,067,552	+				-1.4
2,067,552	+				-1.3
2,067,552	+				-0.1
2,067,552	+				-0.5
2,067,552	+				-2.1
2,067,553	-				-0.7
2,067,553	-				-1.1
2,067,553	-				-0.7
2,067,553	-				-1.0
2,067,553	-				+0.5
2,067,553	-				-0.1
2,067,553	-				-0.7
2,067,553	-				-0.1
2,067,553	-				+0.1
2,067,553	-				-0.1
2,067,553	-				+0.1
2,067,553	-				-0.1
2,067,553	-				+0.1
2,067,553	-				-2.0
2,067,553	-				+0.2
2,067,553	-				+1.9
2,067,553	-				-0.4
2,067,553	-				-0.8
2,067,553	-				-0.3
2,067,553	-				+1.5
2,067,553	-				+0.2
2,067,553	-				+0.1
2,067,553	-				+0.0
2,067,553	-				-0.7
2,067,553	-				+0.3
2,067,599	+				-0.5
2,067,599	+				+0.1
2,067,599	+				-0.1
2,067,599	+				+0.2
2,067,600	-				-0.7
2,067,600	-				+0.4
2,067,600	-				-0.2
2,067,845	+		MPMX19_01985	0.44	-0.6
2,067,845	+		MPMX19_01985	0.44	-0.2
2,067,846	-		MPMX19_01985	0.44	-1.8
2,067,846	-		MPMX19_01985	0.44	-1.1
2,067,920	+		MPMX19_01985	0.55	-0.7
2,067,920	+		MPMX19_01985	0.55	+2.5
2,067,920	+		MPMX19_01985	0.55	+0.1
2,067,920	+		MPMX19_01985	0.55	+0.6
2,067,920	+		MPMX19_01985	0.55	-1.8
2,067,921	-		MPMX19_01985	0.55	-1.3
2,067,921	-		MPMX19_01985	0.55	-0.7
2,067,921	-		MPMX19_01985	0.55	-0.4
2,067,921	-		MPMX19_01985	0.55	-1.4
2,067,921	-		MPMX19_01985	0.55	+0.8
2,067,944	+		MPMX19_01985	0.59	+0.5
2,067,944	+		MPMX19_01985	0.59	-0.5
2,067,944	+		MPMX19_01985	0.59	-0.4
2,067,944	+		MPMX19_01985	0.59	-1.2
2,067,944	+		MPMX19_01985	0.59	+0.8
2,067,944	+		MPMX19_01985	0.59	+0.0
2,067,944	+		MPMX19_01985	0.59	-0.6
2,067,945	-		MPMX19_01985	0.59	+0.8
2,067,945	-		MPMX19_01985	0.59	+0.1
2,067,945	-		MPMX19_01985	0.59	+1.2
2,067,945	-		MPMX19_01985	0.59	-0.1
2,067,945	-		MPMX19_01985	0.59	-2.1
2,067,945	-		MPMX19_01985	0.59	-1.5
2,068,205	+				+0.5
2,068,205	+				+0.3
2,068,205	+				+0.9
2,068,205	+				+0.7
2,068,205	+				-0.3
2,068,205	+				+0.5
2,068,206	-				-0.1
2,068,206	-				+1.2
2,068,206	-				-1.0
2,068,206	-				+0.5
2,068,206	-				-1.5
2,068,206	-				-0.4
2,068,206	-				+1.3
2,068,206	-				-0.7
2,068,235	+				-0.1
2,068,236	-				-0.8
2,068,253	+				-1.3
2,068,253	+				+0.1
2,068,254	-				-1.1
2,068,254	-				-0.1
2,068,254	-				+0.5
2,068,254	-				-0.1
2,068,254	-				+0.3
2,068,254	-				-1.8
2,068,286	+				+0.7
2,068,286	+				+0.5
2,068,286	+				-1.6
2,068,286	+				+1.0
2,068,286	+				+0.2
2,068,286	+				-0.3
2,068,286	+				-0.5
2,068,286	+				+0.5
2,068,286	+				-0.1
2,068,286	+				-1.7
2,068,287	-				+0.4
2,068,287	-				-1.0
2,068,287	-				+0.8
2,068,287	-				+0.5
2,068,287	-				-0.1
2,068,287	-				-2.0