Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00689

Experiment: NL-CCM; low oxygen

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00688 and MPMX19_00689 are separated by 69 nucleotidesMPMX19_00689 and MPMX19_00690 are separated by 73 nucleotides MPMX19_00688: MPMX19_00688 - Methyl-accepting chemotaxis protein, at 709,323 to 711,011 _00688 MPMX19_00689: MPMX19_00689 - Glyceraldehyde-3-phosphate dehydrogenase 1, at 711,081 to 712,103 _00689 MPMX19_00690: MPMX19_00690 - Transketolase 1, at 712,177 to 714,171 _00690 Position (kb) 711 712 713Strain fitness (log2 ratio) -2 -1 0 1at 711.082 kb on + strandat 711.082 kb on + strandat 711.082 kb on + strandat 711.082 kb on + strandat 711.082 kb on + strandat 711.082 kb on + strandat 711.082 kb on + strandat 711.082 kb on + strandat 711.082 kb on + strandat 711.082 kb on + strandat 711.082 kb on + strandat 711.082 kb on + strandat 711.082 kb on + strandat 711.082 kb on + strandat 711.083 kb on - strandat 711.083 kb on - strandat 711.083 kb on - strandat 711.083 kb on - strandat 711.083 kb on - strandat 711.083 kb on - strandat 711.083 kb on - strandat 711.083 kb on - strandat 711.083 kb on - strandat 711.148 kb on + strandat 711.148 kb on + strandat 711.149 kb on - strandat 711.149 kb on - strandat 711.259 kb on + strand, within MPMX19_00689at 711.259 kb on + strand, within MPMX19_00689at 711.259 kb on + strand, within MPMX19_00689at 711.259 kb on + strand, within MPMX19_00689at 711.260 kb on - strand, within MPMX19_00689at 711.260 kb on - strand, within MPMX19_00689at 711.260 kb on - strand, within MPMX19_00689at 711.260 kb on - strand, within MPMX19_00689at 712.039 kb on + strandat 712.039 kb on + strandat 712.096 kb on - strandat 712.179 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM; low oxygen
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711,082 + +0.1
711,082 + -0.6
711,082 + +0.2
711,082 + +0.8
711,082 + +1.7
711,082 + +0.0
711,082 + -1.7
711,082 + -1.8
711,082 + +0.2
711,082 + -1.0
711,082 + +0.7
711,082 + -0.1
711,082 + -0.7
711,082 + -0.6
711,083 - -0.5
711,083 - +0.5
711,083 - -0.8
711,083 - +0.0
711,083 - -0.7
711,083 - -0.1
711,083 - -0.2
711,083 - -0.9
711,083 - -0.5
711,148 + -1.3
711,148 + -0.2
711,149 - -0.7
711,149 - -1.1
711,259 + MPMX19_00689 0.17 +0.5
711,259 + MPMX19_00689 0.17 -0.8
711,259 + MPMX19_00689 0.17 -0.2
711,259 + MPMX19_00689 0.17 -0.5
711,260 - MPMX19_00689 0.17 -1.0
711,260 - MPMX19_00689 0.17 -2.2
711,260 - MPMX19_00689 0.17 -0.5
711,260 - MPMX19_00689 0.17 +0.2
712,039 + -0.2
712,039 + +1.5
712,096 - -1.3
712,179 - -1.5

Or see this region's nucleotide sequence