Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00074

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
78,356	+		MPMX19_00073	0.60	-0.4
78,356	+		MPMX19_00073	0.60	-1.5
78,356	+		MPMX19_00073	0.60	-0.8
78,356	+		MPMX19_00073	0.60	-0.5
78,356	+		MPMX19_00073	0.60	-1.7
78,356	+		MPMX19_00073	0.60	-0.1
78,356	+		MPMX19_00073	0.60	+1.0
78,356	+		MPMX19_00073	0.60	+0.9
78,356	+		MPMX19_00073	0.60	-0.5
78,356	+		MPMX19_00073	0.60	+0.3
78,357	-		MPMX19_00073	0.60	+0.5
78,357	-		MPMX19_00073	0.60	-0.9
78,357	-		MPMX19_00073	0.60	-1.4
78,366	+		MPMX19_00073	0.61	-0.5
78,366	+		MPMX19_00073	0.61	-0.8
78,366	+		MPMX19_00073	0.61	+0.1
78,366	+		MPMX19_00073	0.61	-0.6
78,366	+		MPMX19_00073	0.61	-0.9
78,367	-		MPMX19_00073	0.61	+0.3
78,367	-		MPMX19_00073	0.61	-1.1
78,384	+		MPMX19_00073	0.62	+0.3
78,384	+		MPMX19_00073	0.62	+0.2
78,385	-		MPMX19_00073	0.62	-0.1
78,385	-		MPMX19_00073	0.62	-0.8
78,385	-		MPMX19_00073	0.62	-1.0
78,385	-		MPMX19_00073	0.62	-0.1
78,591	+		MPMX19_00073	0.75	-0.7
78,591	+		MPMX19_00073	0.75	-0.9
78,592	-		MPMX19_00073	0.75	-1.1
78,592	-		MPMX19_00073	0.75	+0.6
78,592	-		MPMX19_00073	0.75	+0.1
78,678	+		MPMX19_00073	0.80	+0.2
78,678	+		MPMX19_00073	0.80	+0.2
78,678	+		MPMX19_00073	0.80	-0.6
78,678	+		MPMX19_00073	0.80	+1.0
78,679	-		MPMX19_00073	0.80	+1.1
78,679	-		MPMX19_00073	0.80	+0.4
78,679	-		MPMX19_00073	0.80	+1.1
78,679	-		MPMX19_00073	0.80	-0.5
78,679	-		MPMX19_00073	0.80	-0.3
78,679	-		MPMX19_00073	0.80	-0.1
78,679	-		MPMX19_00073	0.80	-0.2
78,679	-		MPMX19_00073	0.80	+1.1
78,679	-		MPMX19_00073	0.80	+0.7
78,679	-		MPMX19_00073	0.80	-2.5
78,762	+		MPMX19_00073	0.85	-2.5
78,762	+		MPMX19_00073	0.85	-0.2
78,762	+		MPMX19_00073	0.85	-1.0
78,762	+		MPMX19_00073	0.85	-1.3
78,762	+		MPMX19_00073	0.85	-0.3
78,762	+		MPMX19_00073	0.85	-0.1
78,762	+		MPMX19_00073	0.85	-0.1
78,763	-		MPMX19_00073	0.85	-0.9
78,763	-		MPMX19_00073	0.85	+1.8
78,763	-		MPMX19_00073	0.85	+0.6
78,763	-		MPMX19_00073	0.85	+1.5
78,763	-		MPMX19_00073	0.85	+0.8
78,763	-		MPMX19_00073	0.85	-1.1
78,763	-		MPMX19_00073	0.85	+0.6
78,763	-		MPMX19_00073	0.85	-0.6
78,763	-		MPMX19_00073	0.85	-0.2
78,763	-		MPMX19_00073	0.85	-1.8
78,763	-		MPMX19_00073	0.85	-0.2
78,763	-		MPMX19_00073	0.85	+0.3
78,763	-		MPMX19_00073	0.85	+0.5
78,763	-		MPMX19_00073	0.85	-0.3
78,763	-		MPMX19_00073	0.85	-0.9
78,763	-		MPMX19_00073	0.85	-0.1
78,763	-		MPMX19_00073	0.85	-2.6
78,763	-		MPMX19_00073	0.85	+1.0
78,763	-		MPMX19_00073	0.85	-1.4
78,763	-		MPMX19_00073	0.85	-0.6
78,763	-		MPMX19_00073	0.85	-1.7
78,763	-		MPMX19_00073	0.85	+0.3
78,978	+				+0.0
78,978	+				+0.0
78,978	+				-0.2
78,978	+				+0.2
78,978	+				-1.5
78,978	+				+0.1
78,978	+				-0.2
78,978	+				-0.7
78,978	+				-0.8
78,978	+				+0.0
78,978	+				+0.3
78,979	-				-2.1
78,979	-				-1.5
78,979	-				+0.7
78,979	-				-0.2
78,979	-				+0.1
78,979	-				-1.2
78,979	-				+0.7
78,979	-				+1.0
78,979	-				+0.2
78,979	-				+0.2
79,008	+				-0.3
79,008	+				-1.7
79,008	+				-0.7
79,008	+				-0.2
79,008	+				-1.8
79,008	+				-1.7
79,008	+				-0.2
79,008	+				-0.5
79,008	+				-0.8
79,008	+				-0.3
79,009	-				+0.3
79,009	-				-0.9
79,009	-				-0.8
79,184	+				+0.6
79,184	+				+0.4
79,184	+				+0.5
79,184	+				+0.5
79,184	+				+1.1
79,184	+				-0.5
79,184	+				-0.2
79,184	+				+0.3
79,184	+				-1.0
79,184	+				+1.5
79,185	-				+0.1
79,185	-				-0.4
79,185	-				-1.6
79,185	-				+0.3
79,185	-				-1.4
79,185	-				+0.2
79,185	-				-1.1
79,185	-				-0.8
79,185	-				+1.5
79,185	-				+0.5
79,185	-				-0.3
79,185	-				-0.2
79,701	-		MPMX19_00074	0.74	+0.7
79,701	-		MPMX19_00074	0.74	-0.8
79,701	-		MPMX19_00074	0.74	-1.1
79,701	-		MPMX19_00074	0.74	-1.2
79,701	-		MPMX19_00074	0.74	-1.5
79,701	-		MPMX19_00074	0.74	+0.3
79,701	-		MPMX19_00074	0.74	-0.7
80,143	+		MPMX19_00075	0.21	+0.2
80,143	+		MPMX19_00075	0.21	+0.7
80,201	-		MPMX19_00075	0.27	-2.3
80,223	+		MPMX19_00075	0.29	-0.2
80,223	+		MPMX19_00075	0.29	-0.7
80,224	-		MPMX19_00075	0.29	+1.2
80,224	-		MPMX19_00075	0.29	-2.1
80,224	-		MPMX19_00075	0.29	-0.4
80,224	-		MPMX19_00075	0.29	-0.5
80,332	+		MPMX19_00075	0.41	-0.5
80,332	+		MPMX19_00075	0.41	-0.5
80,332	+		MPMX19_00075	0.41	-0.1
80,332	+		MPMX19_00075	0.41	-1.5
80,333	-		MPMX19_00075	0.41	-0.8
80,333	-		MPMX19_00075	0.41	-0.9
80,333	-		MPMX19_00075	0.41	-0.0
80,333	-		MPMX19_00075	0.41	-1.2
80,385	+		MPMX19_00075	0.47	-1.3
80,385	+		MPMX19_00075	0.47	-0.7
80,385	+		MPMX19_00075	0.47	+0.3
80,385	+		MPMX19_00075	0.47	+0.5
80,385	+		MPMX19_00075	0.47	+0.8
80,385	+		MPMX19_00075	0.47	-0.2
80,386	-		MPMX19_00075	0.47	-0.5
80,386	-		MPMX19_00075	0.47	-0.2
80,386	-		MPMX19_00075	0.47	-0.2
80,386	-		MPMX19_00075	0.47	-1.1
80,386	-		MPMX19_00075	0.47	-0.1
80,386	-		MPMX19_00075	0.47	-1.2
80,386	-		MPMX19_00075	0.47	-0.5
80,665	+		MPMX19_00075	0.77	-1.5
80,665	+		MPMX19_00075	0.77	+1.5
80,665	+		MPMX19_00075	0.77	-0.5
80,666	-		MPMX19_00075	0.77	+0.2
80,666	-		MPMX19_00075	0.77	+0.1
80,666	-		MPMX19_00075	0.77	-0.2
80,666	-		MPMX19_00075	0.77	-0.2
80,666	-		MPMX19_00075	0.77	+0.3
80,666	-		MPMX19_00075	0.77	-0.5
80,666	-		MPMX19_00075	0.77	-1.4
80,707	+		MPMX19_00075	0.82	+1.3
80,707	+		MPMX19_00075	0.82	+0.5
80,707	+		MPMX19_00075	0.82	-0.5
80,707	+		MPMX19_00075	0.82	-1.0
80,707	+		MPMX19_00075	0.82	-0.8
80,707	+		MPMX19_00075	0.82	-1.7
80,707	+		MPMX19_00075	0.82	-0.9
80,707	+		MPMX19_00075	0.82	-0.4
80,707	+		MPMX19_00075	0.82	+0.8
80,707	+		MPMX19_00075	0.82	-0.5
80,707	+		MPMX19_00075	0.82	+0.3
80,707	+		MPMX19_00075	0.82	+0.2
80,707	+		MPMX19_00075	0.82	-0.7
80,707	+		MPMX19_00075	0.82	+0.0
80,707	+		MPMX19_00075	0.82	+0.4
80,707	+		MPMX19_00075	0.82	+2.1
80,707	+		MPMX19_00075	0.82	-0.1
80,707	+		MPMX19_00075	0.82	-0.5
80,707	+		MPMX19_00075	0.82	+0.5
80,707	+		MPMX19_00075	0.82	-1.0
80,707	+		MPMX19_00075	0.82	+0.5
80,708	-		MPMX19_00075	0.82	-0.6
80,708	-		MPMX19_00075	0.82	+1.1
80,708	-		MPMX19_00075	0.82	+0.2
80,708	-		MPMX19_00075	0.82	-1.1
80,708	-		MPMX19_00075	0.82	-0.3
80,708	-		MPMX19_00075	0.82	-0.2
80,708	-		MPMX19_00075	0.82	+0.4
80,708	-		MPMX19_00075	0.82	-0.1
80,708	-		MPMX19_00075	0.82	+1.2
80,708	-		MPMX19_00075	0.82	-1.1
80,708	-		MPMX19_00075	0.82	+0.4
80,708	-		MPMX19_00075	0.82	-0.2
80,708	-		MPMX19_00075	0.82	-0.4
80,708	-		MPMX19_00075	0.82	-2.1
80,708	-		MPMX19_00075	0.82	-1.5
80,708	-		MPMX19_00075	0.82	+0.0
80,821	+				-0.8
80,821	+				-0.4
80,822	-				-0.6
80,822	-				-1.4
80,822	-				+0.1