Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_02794 and GEMAOFIL_02795 are separated by 160 nucleotides GEMAOFIL_02795 and GEMAOFIL_02796 are separated by 232 nucleotides GEMAOFIL_02796 and GEMAOFIL_02797 overlap by 4 nucleotides
GEMAOFIL_02794: GEMAOFIL_02794 - hypothetical protein, at 3,060,565 to 3,061,854
_02794
GEMAOFIL_02795: GEMAOFIL_02795 - Thiol peroxidase, at 3,062,015 to 3,062,515
_02795
GEMAOFIL_02796: GEMAOFIL_02796 - Multidrug resistance protein MdtA, at 3,062,748 to 3,064,046
_02796
GEMAOFIL_02797: GEMAOFIL_02797 - Multidrug resistance protein MdtB, at 3,064,043 to 3,067,144
_02797
Position (kb)
3062
3063
3064
3065 Strain fitness (log2 ratio)
-2
-1
0
1 at 3061.776 kb on + strand at 3061.776 kb on + strand at 3061.776 kb on + strand at 3061.776 kb on + strand at 3061.777 kb on - strand at 3061.777 kb on - strand at 3061.818 kb on - strand at 3062.002 kb on - strand at 3062.002 kb on - strand at 3062.363 kb on + strand, within GEMAOFIL_02795 at 3062.546 kb on + strand at 3062.559 kb on - strand at 3062.633 kb on + strand at 3062.657 kb on - strand at 3062.657 kb on - strand at 3062.668 kb on - strand at 3062.671 kb on + strand at 3062.672 kb on - strand at 3062.672 kb on - strand at 3062.894 kb on + strand, within GEMAOFIL_02796 at 3062.988 kb on + strand, within GEMAOFIL_02796 at 3062.988 kb on + strand, within GEMAOFIL_02796 at 3062.988 kb on + strand, within GEMAOFIL_02796 at 3062.989 kb on - strand, within GEMAOFIL_02796 at 3062.989 kb on - strand, within GEMAOFIL_02796 at 3062.989 kb on - strand, within GEMAOFIL_02796 at 3063.882 kb on - strand, within GEMAOFIL_02796 at 3064.428 kb on - strand, within GEMAOFIL_02797 at 3064.428 kb on - strand, within GEMAOFIL_02797 at 3064.428 kb on - strand, within GEMAOFIL_02797
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,061,776 + -1.0 3,061,776 + +0.1 3,061,776 + +0.0 3,061,776 + -1.6 3,061,777 - +0.4 3,061,777 - -0.0 3,061,818 - +0.2 3,062,002 - +0.4 3,062,002 - +0.5 3,062,363 + GEMAOFIL_02795 0.69 +0.2 3,062,546 + -2.0 3,062,559 - +0.1 3,062,633 + -0.0 3,062,657 - +0.7 3,062,657 - -0.3 3,062,668 - +0.1 3,062,671 + -0.6 3,062,672 - +0.4 3,062,672 - +1.2 3,062,894 + GEMAOFIL_02796 0.11 -0.7 3,062,988 + GEMAOFIL_02796 0.18 +0.1 3,062,988 + GEMAOFIL_02796 0.18 -1.8 3,062,988 + GEMAOFIL_02796 0.18 -2.0 3,062,989 - GEMAOFIL_02796 0.19 -0.8 3,062,989 - GEMAOFIL_02796 0.19 -0.7 3,062,989 - GEMAOFIL_02796 0.19 -2.4 3,063,882 - GEMAOFIL_02796 0.87 -0.3 3,064,428 - GEMAOFIL_02797 0.12 -0.4 3,064,428 - GEMAOFIL_02797 0.12 +0.5 3,064,428 - GEMAOFIL_02797 0.12 -0.3
Or see this region's nucleotide sequence