Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_00015 and GEMAOFIL_00016 are separated by 85 nucleotides GEMAOFIL_00016 and GEMAOFIL_00017 are separated by 229 nucleotides GEMAOFIL_00017 and GEMAOFIL_00018 are separated by 69 nucleotides GEMAOFIL_00018 and GEMAOFIL_00019 are separated by 11 nucleotides
GEMAOFIL_00015: GEMAOFIL_00015 - putative MFS-type transporter YcaD, at 14,703 to 15,845
_00015
GEMAOFIL_00016: GEMAOFIL_00016 - NADP/NAD-dependent aldehyde dehydrogenase PuuC, at 15,931 to 17,424
_00016
GEMAOFIL_00017: GEMAOFIL_00017 - hypothetical protein, at 17,654 to 18,016
_00017
GEMAOFIL_00018: GEMAOFIL_00018 - 50S ribosomal protein L33, at 18,086 to 18,241
_00018
GEMAOFIL_00019: GEMAOFIL_00019 - 50S ribosomal protein L28, at 18,253 to 18,486
_00019
Position (kb) 15
16
17
18 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 14.941 kb on - strand, within GEMAOFIL_00015 at 15.074 kb on - strand, within GEMAOFIL_00015 at 15.074 kb on - strand, within GEMAOFIL_00015 at 15.178 kb on + strand, within GEMAOFIL_00015 at 15.178 kb on + strand, within GEMAOFIL_00015 at 15.178 kb on + strand, within GEMAOFIL_00015 at 15.179 kb on - strand, within GEMAOFIL_00015 at 15.179 kb on - strand, within GEMAOFIL_00015 at 15.179 kb on - strand, within GEMAOFIL_00015 at 15.333 kb on + strand, within GEMAOFIL_00015 at 15.436 kb on + strand, within GEMAOFIL_00015 at 15.436 kb on + strand, within GEMAOFIL_00015 at 15.436 kb on + strand, within GEMAOFIL_00015 at 15.448 kb on + strand, within GEMAOFIL_00015 at 15.739 kb on + strand at 15.807 kb on + strand at 15.807 kb on + strand at 15.807 kb on + strand at 15.829 kb on + strand at 15.830 kb on - strand at 15.830 kb on - strand at 15.875 kb on + strand at 15.876 kb on - strand at 15.933 kb on - strand at 15.933 kb on - strand at 15.966 kb on - strand at 16.052 kb on + strand at 16.113 kb on + strand, within GEMAOFIL_00016 at 16.114 kb on - strand, within GEMAOFIL_00016 at 16.145 kb on + strand, within GEMAOFIL_00016 at 16.145 kb on + strand, within GEMAOFIL_00016 at 16.145 kb on + strand, within GEMAOFIL_00016 at 16.146 kb on - strand, within GEMAOFIL_00016 at 16.146 kb on - strand, within GEMAOFIL_00016 at 16.146 kb on - strand, within GEMAOFIL_00016 at 16.194 kb on + strand, within GEMAOFIL_00016 at 16.194 kb on + strand, within GEMAOFIL_00016 at 16.195 kb on - strand, within GEMAOFIL_00016 at 16.195 kb on - strand, within GEMAOFIL_00016 at 16.195 kb on - strand, within GEMAOFIL_00016 at 16.195 kb on - strand, within GEMAOFIL_00016 at 16.195 kb on - strand, within GEMAOFIL_00016 at 16.281 kb on - strand, within GEMAOFIL_00016 at 16.281 kb on - strand, within GEMAOFIL_00016 at 16.281 kb on - strand, within GEMAOFIL_00016 at 16.602 kb on + strand, within GEMAOFIL_00016 at 16.633 kb on + strand, within GEMAOFIL_00016 at 16.634 kb on - strand, within GEMAOFIL_00016 at 16.634 kb on - strand, within GEMAOFIL_00016 at 16.634 kb on - strand, within GEMAOFIL_00016 at 17.010 kb on - strand, within GEMAOFIL_00016 at 17.342 kb on + strand at 17.358 kb on - strand at 17.441 kb on + strand at 17.442 kb on - strand at 17.442 kb on - strand at 17.448 kb on + strand at 17.448 kb on + strand at 17.449 kb on - strand at 17.449 kb on - strand at 17.533 kb on - strand at 17.559 kb on - strand at 17.559 kb on - strand at 17.561 kb on - strand at 17.561 kb on - strand at 17.569 kb on + strand at 17.570 kb on - strand at 17.570 kb on - strand at 17.611 kb on + strand at 17.611 kb on + strand at 17.759 kb on + strand, within GEMAOFIL_00017 at 17.759 kb on + strand, within GEMAOFIL_00017 at 17.760 kb on - strand, within GEMAOFIL_00017 at 17.768 kb on + strand, within GEMAOFIL_00017 at 17.769 kb on - strand, within GEMAOFIL_00017 at 17.769 kb on - strand, within GEMAOFIL_00017 at 17.837 kb on + strand, within GEMAOFIL_00017 at 17.837 kb on + strand, within GEMAOFIL_00017 at 17.837 kb on + strand, within GEMAOFIL_00017 at 17.852 kb on + strand, within GEMAOFIL_00017 at 17.853 kb on - strand, within GEMAOFIL_00017 at 17.853 kb on - strand, within GEMAOFIL_00017 at 17.967 kb on + strand, within GEMAOFIL_00017 at 17.968 kb on - strand, within GEMAOFIL_00017 at 17.968 kb on - strand, within GEMAOFIL_00017 at 17.990 kb on + strand at 17.991 kb on - strand at 18.108 kb on + strand, within GEMAOFIL_00018 at 18.167 kb on - strand, within GEMAOFIL_00018 at 18.193 kb on - strand, within GEMAOFIL_00018 at 18.193 kb on - strand, within GEMAOFIL_00018 at 18.255 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 14,941 - GEMAOFIL_00015 0.21 +0.2 15,074 - GEMAOFIL_00015 0.32 +0.1 15,074 - GEMAOFIL_00015 0.32 +0.1 15,178 + GEMAOFIL_00015 0.42 +0.0 15,178 + GEMAOFIL_00015 0.42 +1.8 15,178 + GEMAOFIL_00015 0.42 -2.3 15,179 - GEMAOFIL_00015 0.42 +0.7 15,179 - GEMAOFIL_00015 0.42 +0.3 15,179 - GEMAOFIL_00015 0.42 +0.1 15,333 + GEMAOFIL_00015 0.55 -0.4 15,436 + GEMAOFIL_00015 0.64 +0.5 15,436 + GEMAOFIL_00015 0.64 -0.1 15,436 + GEMAOFIL_00015 0.64 +0.2 15,448 + GEMAOFIL_00015 0.65 -0.1 15,739 + -0.0 15,807 + -0.1 15,807 + -0.1 15,807 + +0.0 15,829 + +0.3 15,830 - +0.3 15,830 - +0.3 15,875 + +0.4 15,876 - +0.5 15,933 - -2.0 15,933 - +0.1 15,966 - -0.2 16,052 + +0.2 16,113 + GEMAOFIL_00016 0.12 -0.5 16,114 - GEMAOFIL_00016 0.12 -0.2 16,145 + GEMAOFIL_00016 0.14 -0.9 16,145 + GEMAOFIL_00016 0.14 +0.2 16,145 + GEMAOFIL_00016 0.14 -0.7 16,146 - GEMAOFIL_00016 0.14 -0.4 16,146 - GEMAOFIL_00016 0.14 +0.2 16,146 - GEMAOFIL_00016 0.14 -0.5 16,194 + GEMAOFIL_00016 0.18 -0.3 16,194 + GEMAOFIL_00016 0.18 -0.4 16,195 - GEMAOFIL_00016 0.18 -0.9 16,195 - GEMAOFIL_00016 0.18 +0.9 16,195 - GEMAOFIL_00016 0.18 +0.1 16,195 - GEMAOFIL_00016 0.18 +1.0 16,195 - GEMAOFIL_00016 0.18 -0.3 16,281 - GEMAOFIL_00016 0.23 +0.0 16,281 - GEMAOFIL_00016 0.23 -0.2 16,281 - GEMAOFIL_00016 0.23 +0.2 16,602 + GEMAOFIL_00016 0.45 +0.0 16,633 + GEMAOFIL_00016 0.47 -1.5 16,634 - GEMAOFIL_00016 0.47 +0.8 16,634 - GEMAOFIL_00016 0.47 +0.3 16,634 - GEMAOFIL_00016 0.47 +0.5 17,010 - GEMAOFIL_00016 0.72 +0.4 17,342 + -1.0 17,358 - -1.7 17,441 + +0.2 17,442 - +0.5 17,442 - -1.0 17,448 + -0.6 17,448 + -0.6 17,449 - +0.4 17,449 - -0.4 17,533 - +1.0 17,559 - +0.2 17,559 - +0.9 17,561 - -0.6 17,561 - +0.1 17,569 + +0.6 17,570 - +0.4 17,570 - -0.6 17,611 + -0.1 17,611 + +0.4 17,759 + GEMAOFIL_00017 0.29 -2.9 17,759 + GEMAOFIL_00017 0.29 +0.4 17,760 - GEMAOFIL_00017 0.29 +0.0 17,768 + GEMAOFIL_00017 0.31 -0.1 17,769 - GEMAOFIL_00017 0.32 +1.2 17,769 - GEMAOFIL_00017 0.32 +0.3 17,837 + GEMAOFIL_00017 0.50 +0.2 17,837 + GEMAOFIL_00017 0.50 +0.1 17,837 + GEMAOFIL_00017 0.50 -0.6 17,852 + GEMAOFIL_00017 0.55 -2.0 17,853 - GEMAOFIL_00017 0.55 -0.1 17,853 - GEMAOFIL_00017 0.55 -0.6 17,967 + GEMAOFIL_00017 0.86 +0.7 17,968 - GEMAOFIL_00017 0.87 -0.9 17,968 - GEMAOFIL_00017 0.87 +0.5 17,990 + -0.1 17,991 - -0.8 18,108 + GEMAOFIL_00018 0.14 -0.8 18,167 - GEMAOFIL_00018 0.52 -1.7 18,193 - GEMAOFIL_00018 0.69 -1.0 18,193 - GEMAOFIL_00018 0.69 -0.2 18,255 - -0.6
Or see this region's nucleotide sequence