Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_00135 and GEMAOFIL_00136 are separated by 69 nucleotides GEMAOFIL_00136 and GEMAOFIL_00137 are separated by 87 nucleotides GEMAOFIL_00137 and GEMAOFIL_00138 overlap by 10 nucleotides
GEMAOFIL_00135: GEMAOFIL_00135 - Major cardiolipin synthase ClsA, at 153,037 to 154,476
_00135
GEMAOFIL_00136: GEMAOFIL_00136 - Ubiquinone biosynthesis O-methyltransferase, mitochondrial, at 154,546 to 155,730
_00136
GEMAOFIL_00137: GEMAOFIL_00137 - hypothetical protein, at 155,818 to 156,606
_00137
GEMAOFIL_00138: GEMAOFIL_00138 - hypothetical protein, at 156,597 to 157,442
_00138
Position (kb) 154
155
156 Strain fitness (log2 ratio) -1
0
1 at 153.575 kb on - strand, within GEMAOFIL_00135 at 153.717 kb on - strand, within GEMAOFIL_00135 at 153.770 kb on - strand, within GEMAOFIL_00135 at 153.807 kb on + strand, within GEMAOFIL_00135 at 153.902 kb on + strand, within GEMAOFIL_00135 at 153.903 kb on - strand, within GEMAOFIL_00135 at 153.945 kb on - strand, within GEMAOFIL_00135 at 153.971 kb on - strand, within GEMAOFIL_00135 at 154.165 kb on + strand, within GEMAOFIL_00135 at 154.166 kb on - strand, within GEMAOFIL_00135 at 154.166 kb on - strand, within GEMAOFIL_00135 at 154.166 kb on - strand, within GEMAOFIL_00135 at 154.223 kb on + strand, within GEMAOFIL_00135 at 154.223 kb on + strand, within GEMAOFIL_00135 at 154.224 kb on - strand, within GEMAOFIL_00135 at 154.302 kb on + strand, within GEMAOFIL_00135 at 154.525 kb on + strand at 154.526 kb on - strand at 154.526 kb on - strand at 154.526 kb on - strand at 154.553 kb on + strand at 154.553 kb on + strand at 154.553 kb on + strand at 154.554 kb on - strand at 154.557 kb on + strand at 154.557 kb on + strand at 154.557 kb on + strand at 154.558 kb on - strand at 154.653 kb on - strand at 154.683 kb on + strand, within GEMAOFIL_00136 at 154.683 kb on + strand, within GEMAOFIL_00136 at 154.769 kb on + strand, within GEMAOFIL_00136 at 154.770 kb on - strand, within GEMAOFIL_00136 at 154.872 kb on - strand, within GEMAOFIL_00136 at 154.920 kb on + strand, within GEMAOFIL_00136 at 154.978 kb on + strand, within GEMAOFIL_00136 at 154.979 kb on - strand, within GEMAOFIL_00136 at 154.992 kb on - strand, within GEMAOFIL_00136 at 155.183 kb on - strand, within GEMAOFIL_00136 at 155.246 kb on + strand, within GEMAOFIL_00136 at 155.247 kb on - strand, within GEMAOFIL_00136 at 155.247 kb on - strand, within GEMAOFIL_00136 at 155.349 kb on - strand, within GEMAOFIL_00136 at 155.379 kb on - strand, within GEMAOFIL_00136 at 155.734 kb on + strand at 155.735 kb on - strand at 155.735 kb on - strand at 155.770 kb on - strand at 155.808 kb on + strand at 155.809 kb on - strand at 155.819 kb on + strand at 155.871 kb on + strand at 155.872 kb on - strand at 155.872 kb on - strand at 155.872 kb on - strand at 155.900 kb on + strand, within GEMAOFIL_00137 at 155.900 kb on + strand, within GEMAOFIL_00137 at 155.900 kb on + strand, within GEMAOFIL_00137 at 155.996 kb on + strand, within GEMAOFIL_00137 at 155.996 kb on + strand, within GEMAOFIL_00137 at 155.997 kb on - strand, within GEMAOFIL_00137 at 155.997 kb on - strand, within GEMAOFIL_00137 at 156.004 kb on + strand, within GEMAOFIL_00137 at 156.004 kb on + strand, within GEMAOFIL_00137 at 156.004 kb on + strand, within GEMAOFIL_00137 at 156.005 kb on - strand, within GEMAOFIL_00137 at 156.005 kb on - strand, within GEMAOFIL_00137 at 156.118 kb on + strand, within GEMAOFIL_00137 at 156.118 kb on + strand, within GEMAOFIL_00137 at 156.118 kb on + strand, within GEMAOFIL_00137 at 156.119 kb on - strand, within GEMAOFIL_00137 at 156.344 kb on + strand, within GEMAOFIL_00137 at 156.371 kb on + strand, within GEMAOFIL_00137 at 156.371 kb on + strand, within GEMAOFIL_00137 at 156.372 kb on - strand, within GEMAOFIL_00137 at 156.372 kb on - strand, within GEMAOFIL_00137 at 156.372 kb on - strand, within GEMAOFIL_00137 at 156.414 kb on - strand, within GEMAOFIL_00137 at 156.443 kb on - strand, within GEMAOFIL_00137 at 156.464 kb on + strand, within GEMAOFIL_00137 at 156.464 kb on + strand, within GEMAOFIL_00137 at 156.477 kb on - strand, within GEMAOFIL_00137 at 156.477 kb on - strand, within GEMAOFIL_00137 at 156.565 kb on + strand at 156.566 kb on - strand at 156.566 kb on - strand at 156.566 kb on - strand at 156.566 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 153,575 - GEMAOFIL_00135 0.37 +0.3 153,717 - GEMAOFIL_00135 0.47 +0.4 153,770 - GEMAOFIL_00135 0.51 +0.9 153,807 + GEMAOFIL_00135 0.53 -0.3 153,902 + GEMAOFIL_00135 0.60 +0.3 153,903 - GEMAOFIL_00135 0.60 +0.2 153,945 - GEMAOFIL_00135 0.63 -0.7 153,971 - GEMAOFIL_00135 0.65 -0.1 154,165 + GEMAOFIL_00135 0.78 -1.5 154,166 - GEMAOFIL_00135 0.78 +0.2 154,166 - GEMAOFIL_00135 0.78 +0.3 154,166 - GEMAOFIL_00135 0.78 +0.2 154,223 + GEMAOFIL_00135 0.82 -0.5 154,223 + GEMAOFIL_00135 0.82 -1.5 154,224 - GEMAOFIL_00135 0.82 +0.8 154,302 + GEMAOFIL_00135 0.88 -0.3 154,525 + -0.6 154,526 - +0.2 154,526 - -0.3 154,526 - -0.0 154,553 + +1.0 154,553 + +0.4 154,553 + -0.4 154,554 - +0.5 154,557 + +1.1 154,557 + +0.8 154,557 + +0.0 154,558 - +0.1 154,653 - -0.8 154,683 + GEMAOFIL_00136 0.12 -0.3 154,683 + GEMAOFIL_00136 0.12 -0.4 154,769 + GEMAOFIL_00136 0.19 -0.3 154,770 - GEMAOFIL_00136 0.19 +0.3 154,872 - GEMAOFIL_00136 0.28 -0.4 154,920 + GEMAOFIL_00136 0.32 +1.0 154,978 + GEMAOFIL_00136 0.36 -0.5 154,979 - GEMAOFIL_00136 0.37 +0.8 154,992 - GEMAOFIL_00136 0.38 -0.3 155,183 - GEMAOFIL_00136 0.54 -0.2 155,246 + GEMAOFIL_00136 0.59 -0.0 155,247 - GEMAOFIL_00136 0.59 +0.6 155,247 - GEMAOFIL_00136 0.59 +0.2 155,349 - GEMAOFIL_00136 0.68 +0.7 155,379 - GEMAOFIL_00136 0.70 +0.5 155,734 + -0.8 155,735 - +0.0 155,735 - +0.7 155,770 - -0.3 155,808 + -0.3 155,809 - +0.2 155,819 + +0.2 155,871 + +0.5 155,872 - -0.3 155,872 - +0.9 155,872 - -0.0 155,900 + GEMAOFIL_00137 0.10 -0.2 155,900 + GEMAOFIL_00137 0.10 +0.2 155,900 + GEMAOFIL_00137 0.10 +0.3 155,996 + GEMAOFIL_00137 0.23 +0.9 155,996 + GEMAOFIL_00137 0.23 +0.4 155,997 - GEMAOFIL_00137 0.23 -0.9 155,997 - GEMAOFIL_00137 0.23 -0.2 156,004 + GEMAOFIL_00137 0.24 -0.0 156,004 + GEMAOFIL_00137 0.24 +0.6 156,004 + GEMAOFIL_00137 0.24 -0.2 156,005 - GEMAOFIL_00137 0.24 -0.1 156,005 - GEMAOFIL_00137 0.24 +0.9 156,118 + GEMAOFIL_00137 0.38 +0.1 156,118 + GEMAOFIL_00137 0.38 -0.6 156,118 + GEMAOFIL_00137 0.38 +0.8 156,119 - GEMAOFIL_00137 0.38 +0.0 156,344 + GEMAOFIL_00137 0.67 +0.8 156,371 + GEMAOFIL_00137 0.70 +0.5 156,371 + GEMAOFIL_00137 0.70 +0.8 156,372 - GEMAOFIL_00137 0.70 +1.1 156,372 - GEMAOFIL_00137 0.70 +0.0 156,372 - GEMAOFIL_00137 0.70 +0.5 156,414 - GEMAOFIL_00137 0.76 +0.5 156,443 - GEMAOFIL_00137 0.79 +1.0 156,464 + GEMAOFIL_00137 0.82 +0.5 156,464 + GEMAOFIL_00137 0.82 -0.6 156,477 - GEMAOFIL_00137 0.84 -0.2 156,477 - GEMAOFIL_00137 0.84 -0.1 156,565 + +0.9 156,566 - -1.7 156,566 - +0.3 156,566 - +0.2 156,566 - +0.8
Or see this region's nucleotide sequence