Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_03089 and GEMAOFIL_03090 are separated by 339 nucleotides GEMAOFIL_03090 and GEMAOFIL_03091 overlap by 16 nucleotides GEMAOFIL_03091 and GEMAOFIL_03092 are separated by 9 nucleotides
GEMAOFIL_03089: GEMAOFIL_03089 - Ribose import ATP-binding protein RbsA, at 3,392,267 to 3,393,799
_03089
GEMAOFIL_03090: GEMAOFIL_03090 - Sensor histidine kinase RcsC, at 3,394,139 to 3,395,485
_03090
GEMAOFIL_03091: GEMAOFIL_03091 - Polar-differentiation response regulator DivK, at 3,395,470 to 3,395,853
_03091
GEMAOFIL_03092: GEMAOFIL_03092 - Protein-glutamate methylesterase/protein-glutamine glutaminase, at 3,395,863 to 3,397,104
_03092
Position (kb) 3394
3395
3396 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 3393.180 kb on + strand, within GEMAOFIL_03089 at 3393.206 kb on - strand, within GEMAOFIL_03089 at 3393.206 kb on - strand, within GEMAOFIL_03089 at 3393.207 kb on + strand, within GEMAOFIL_03089 at 3393.207 kb on + strand, within GEMAOFIL_03089 at 3393.207 kb on + strand, within GEMAOFIL_03089 at 3393.208 kb on - strand, within GEMAOFIL_03089 at 3393.208 kb on - strand, within GEMAOFIL_03089 at 3393.489 kb on + strand, within GEMAOFIL_03089 at 3393.489 kb on + strand, within GEMAOFIL_03089 at 3393.490 kb on - strand, within GEMAOFIL_03089 at 3393.579 kb on + strand, within GEMAOFIL_03089 at 3393.580 kb on - strand, within GEMAOFIL_03089 at 3393.820 kb on + strand at 3393.878 kb on + strand at 3393.878 kb on + strand at 3393.944 kb on + strand at 3394.026 kb on + strand at 3394.462 kb on - strand, within GEMAOFIL_03090 at 3394.505 kb on + strand, within GEMAOFIL_03090 at 3394.505 kb on + strand, within GEMAOFIL_03090 at 3394.506 kb on - strand, within GEMAOFIL_03090 at 3394.506 kb on - strand, within GEMAOFIL_03090 at 3394.506 kb on - strand, within GEMAOFIL_03090 at 3394.820 kb on + strand, within GEMAOFIL_03090 at 3394.821 kb on - strand, within GEMAOFIL_03090 at 3395.069 kb on + strand, within GEMAOFIL_03090 at 3395.070 kb on - strand, within GEMAOFIL_03090 at 3395.070 kb on - strand, within GEMAOFIL_03090 at 3395.118 kb on + strand, within GEMAOFIL_03090 at 3395.119 kb on - strand, within GEMAOFIL_03090 at 3395.139 kb on + strand, within GEMAOFIL_03090 at 3395.164 kb on - strand, within GEMAOFIL_03090 at 3395.184 kb on - strand, within GEMAOFIL_03090 at 3395.770 kb on + strand, within GEMAOFIL_03091 at 3395.771 kb on - strand, within GEMAOFIL_03091 at 3395.771 kb on - strand, within GEMAOFIL_03091 at 3395.771 kb on - strand, within GEMAOFIL_03091 at 3395.771 kb on - strand, within GEMAOFIL_03091 at 3395.804 kb on - strand, within GEMAOFIL_03091 at 3395.850 kb on - strand at 3395.971 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 3,393,180 + GEMAOFIL_03089 0.60 -0.1 3,393,206 - GEMAOFIL_03089 0.61 +0.3 3,393,206 - GEMAOFIL_03089 0.61 -2.8 3,393,207 + GEMAOFIL_03089 0.61 -0.3 3,393,207 + GEMAOFIL_03089 0.61 -1.1 3,393,207 + GEMAOFIL_03089 0.61 -3.4 3,393,208 - GEMAOFIL_03089 0.61 +0.2 3,393,208 - GEMAOFIL_03089 0.61 -0.4 3,393,489 + GEMAOFIL_03089 0.80 -0.3 3,393,489 + GEMAOFIL_03089 0.80 +0.8 3,393,490 - GEMAOFIL_03089 0.80 +0.1 3,393,579 + GEMAOFIL_03089 0.86 +0.3 3,393,580 - GEMAOFIL_03089 0.86 +0.7 3,393,820 + -1.2 3,393,878 + +0.4 3,393,878 + +0.0 3,393,944 + +0.8 3,394,026 + +0.5 3,394,462 - GEMAOFIL_03090 0.24 +1.3 3,394,505 + GEMAOFIL_03090 0.27 +0.3 3,394,505 + GEMAOFIL_03090 0.27 -0.0 3,394,506 - GEMAOFIL_03090 0.27 +0.3 3,394,506 - GEMAOFIL_03090 0.27 +0.1 3,394,506 - GEMAOFIL_03090 0.27 +0.9 3,394,820 + GEMAOFIL_03090 0.51 -3.2 3,394,821 - GEMAOFIL_03090 0.51 +0.6 3,395,069 + GEMAOFIL_03090 0.69 -0.3 3,395,070 - GEMAOFIL_03090 0.69 +1.1 3,395,070 - GEMAOFIL_03090 0.69 -0.2 3,395,118 + GEMAOFIL_03090 0.73 -0.7 3,395,119 - GEMAOFIL_03090 0.73 -0.8 3,395,139 + GEMAOFIL_03090 0.74 +0.8 3,395,164 - GEMAOFIL_03090 0.76 -0.2 3,395,184 - GEMAOFIL_03090 0.78 -0.3 3,395,770 + GEMAOFIL_03091 0.78 +1.5 3,395,771 - GEMAOFIL_03091 0.78 +0.3 3,395,771 - GEMAOFIL_03091 0.78 +0.5 3,395,771 - GEMAOFIL_03091 0.78 +0.4 3,395,771 - GEMAOFIL_03091 0.78 +0.0 3,395,804 - GEMAOFIL_03091 0.87 -0.0 3,395,850 - +0.0 3,395,971 - +1.1
Or see this region's nucleotide sequence