Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_03932 and GEMAOFIL_03933 are separated by 99 nucleotides GEMAOFIL_03933 and GEMAOFIL_03934 overlap by 4 nucleotides GEMAOFIL_03934 and GEMAOFIL_03935 are separated by 66 nucleotides
GEMAOFIL_03932: GEMAOFIL_03932 - tRNA-Val, at 4,368,603 to 4,368,678
_03932
GEMAOFIL_03933: GEMAOFIL_03933 - Galactitol 2-dehydrogenase, at 4,368,778 to 4,369,557
_03933
GEMAOFIL_03934: GEMAOFIL_03934 - O-succinylhomoserine sulfhydrylase, at 4,369,554 to 4,370,765
_03934
GEMAOFIL_03935: GEMAOFIL_03935 - Amidophosphoribosyltransferase, at 4,370,832 to 4,372,337
_03935
Position (kb) 4369
4370
4371 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 4369.076 kb on + strand, within GEMAOFIL_03933 at 4369.077 kb on - strand, within GEMAOFIL_03933 at 4369.248 kb on + strand, within GEMAOFIL_03933 at 4369.249 kb on - strand, within GEMAOFIL_03933 at 4369.249 kb on - strand, within GEMAOFIL_03933 at 4369.644 kb on - strand at 4370.341 kb on + strand, within GEMAOFIL_03934 at 4370.342 kb on - strand, within GEMAOFIL_03934 at 4370.342 kb on - strand, within GEMAOFIL_03934 at 4370.629 kb on + strand, within GEMAOFIL_03934 at 4370.630 kb on - strand, within GEMAOFIL_03934 at 4370.778 kb on + strand at 4370.779 kb on - strand at 4370.795 kb on + strand at 4370.796 kb on - strand at 4370.801 kb on - strand at 4370.843 kb on - strand at 4371.035 kb on - strand, within GEMAOFIL_03935 at 4371.169 kb on + strand, within GEMAOFIL_03935 at 4371.527 kb on - strand, within GEMAOFIL_03935
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 4,369,076 + GEMAOFIL_03933 0.38 +0.3 4,369,077 - GEMAOFIL_03933 0.38 -1.8 4,369,248 + GEMAOFIL_03933 0.60 -0.7 4,369,249 - GEMAOFIL_03933 0.60 -0.6 4,369,249 - GEMAOFIL_03933 0.60 -0.3 4,369,644 - -0.4 4,370,341 + GEMAOFIL_03934 0.65 -4.1 4,370,342 - GEMAOFIL_03934 0.65 -2.2 4,370,342 - GEMAOFIL_03934 0.65 -3.0 4,370,629 + GEMAOFIL_03934 0.89 -4.5 4,370,630 - GEMAOFIL_03934 0.89 -3.9 4,370,778 + -5.4 4,370,779 - -2.1 4,370,795 + -1.9 4,370,796 - -1.2 4,370,801 - +0.3 4,370,843 - -1.1 4,371,035 - GEMAOFIL_03935 0.13 -2.1 4,371,169 + GEMAOFIL_03935 0.22 -1.7 4,371,527 - GEMAOFIL_03935 0.46 -2.1
Or see this region's nucleotide sequence