Experiment: NL-CCM; low oxygen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06100 and MPMX19_06101 are separated by 152 nucleotides MPMX19_06101 and MPMX19_06102 are separated by 228 nucleotides
MPMX19_06100: MPMX19_06100 - Electron transfer flavoprotein-ubiquinone oxidoreductase, at 281,854 to 283,503
_06100
MPMX19_06101: MPMX19_06101 - hypothetical protein, at 283,656 to 284,546
_06101
MPMX19_06102: MPMX19_06102 - Membrane-bound lytic murein transglycosylase C, at 284,775 to 287,072
_06102
Position (kb) 283
284
285 Strain fitness (log2 ratio) -2
-1
0
1 at 283.534 kb on - strand at 283.534 kb on - strand at 283.534 kb on - strand at 283.556 kb on - strand at 283.583 kb on - strand at 283.583 kb on - strand at 283.583 kb on - strand at 283.583 kb on - strand at 283.583 kb on - strand at 283.583 kb on - strand at 283.583 kb on - strand at 283.583 kb on - strand at 283.583 kb on - strand at 283.613 kb on - strand at 283.613 kb on - strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.624 kb on + strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.625 kb on - strand at 283.644 kb on + strand at 283.644 kb on + strand at 283.644 kb on + strand at 283.645 kb on - strand at 283.645 kb on - strand at 283.645 kb on - strand at 283.645 kb on - strand at 283.645 kb on - strand at 283.645 kb on - strand at 283.666 kb on + strand at 283.666 kb on + strand at 283.666 kb on + strand at 283.666 kb on + strand at 283.666 kb on + strand at 283.666 kb on + strand at 283.666 kb on + strand at 283.666 kb on + strand at 284.591 kb on + strand at 284.591 kb on + strand at 284.591 kb on + strand at 284.591 kb on + strand at 284.591 kb on + strand at 284.592 kb on - strand at 284.691 kb on + strand at 284.691 kb on + strand at 284.692 kb on - strand at 284.692 kb on - strand at 284.763 kb on + strand at 284.803 kb on - strand at 284.868 kb on + strand at 284.868 kb on + strand at 284.868 kb on + strand at 284.869 kb on - strand at 285.334 kb on - strand, within MPMX19_06102 at 285.351 kb on + strand, within MPMX19_06102 at 285.352 kb on - strand, within MPMX19_06102
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; low oxygen remove 283,534 - -1.7 283,534 - -0.8 283,534 - -1.6 283,556 - -1.0 283,583 - -0.8 283,583 - -2.1 283,583 - -0.8 283,583 - -0.5 283,583 - -0.7 283,583 - -0.7 283,583 - -0.7 283,583 - -0.8 283,583 - +0.2 283,613 - -0.5 283,613 - -0.2 283,624 + +0.1 283,624 + -1.7 283,624 + -0.0 283,624 + -0.2 283,624 + -1.0 283,624 + -0.4 283,624 + +1.0 283,624 + -1.3 283,624 + -1.2 283,624 + +0.5 283,624 + -0.7 283,624 + -0.1 283,624 + -1.0 283,624 + -1.7 283,624 + -0.0 283,624 + +0.3 283,624 + -0.5 283,624 + -0.8 283,624 + -0.2 283,624 + -2.5 283,624 + +0.2 283,624 + -0.1 283,624 + -0.8 283,624 + -0.5 283,624 + -1.5 283,624 + -0.8 283,624 + +0.8 283,625 - -0.0 283,625 - -1.0 283,625 - +0.4 283,625 - -1.0 283,625 - +0.4 283,625 - -0.2 283,625 - -1.5 283,625 - -0.9 283,625 - -0.2 283,625 - +0.8 283,625 - -2.5 283,625 - +1.1 283,625 - +0.5 283,625 - -0.0 283,625 - -1.9 283,625 - +0.5 283,625 - +0.6 283,625 - +0.9 283,625 - -0.2 283,625 - -0.4 283,625 - -0.9 283,625 - +0.6 283,625 - -2.1 283,625 - -1.0 283,625 - +0.6 283,625 - +0.6 283,625 - -0.0 283,625 - -0.2 283,625 - -0.3 283,625 - +1.5 283,644 + -0.1 283,644 + -0.3 283,644 + +0.2 283,645 - +0.6 283,645 - -1.2 283,645 - -1.2 283,645 - +1.4 283,645 - -0.5 283,645 - +0.5 283,666 + -2.2 283,666 + -0.5 283,666 + -1.7 283,666 + -0.4 283,666 + +0.2 283,666 + -0.3 283,666 + -0.9 283,666 + -0.2 284,591 + -1.0 284,591 + +0.2 284,591 + -0.2 284,591 + -1.3 284,591 + -1.2 284,592 - -0.6 284,691 + -1.4 284,691 + +0.0 284,692 - -0.8 284,692 - -0.6 284,763 + -1.4 284,803 - +0.8 284,868 + -0.4 284,868 + +0.5 284,868 + -1.2 284,869 - -0.5 285,334 - MPMX19_06102 0.24 -0.5 285,351 + MPMX19_06102 0.25 -0.0 285,352 - MPMX19_06102 0.25 +0.2
Or see this region's nucleotide sequence