Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04719

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
106,680	+		MPMX19_04718	0.29	+0.5
106,680	+		MPMX19_04718	0.29	+0.6
106,681	-		MPMX19_04718	0.29	-0.9
106,681	-		MPMX19_04718	0.29	-1.9
106,817	-		MPMX19_04718	0.39	+0.1
106,817	-		MPMX19_04718	0.39	-0.2
106,817	-		MPMX19_04718	0.39	+1.0
106,817	-		MPMX19_04718	0.39	-0.8
106,818	+		MPMX19_04718	0.40	-0.4
106,818	+		MPMX19_04718	0.40	+0.7
106,818	+		MPMX19_04718	0.40	-2.9
106,818	+		MPMX19_04718	0.40	-2.0
106,819	-		MPMX19_04718	0.40	-1.5
106,819	-		MPMX19_04718	0.40	-0.5
106,819	-		MPMX19_04718	0.40	-1.4
106,819	-		MPMX19_04718	0.40	-0.0
106,918	+		MPMX19_04718	0.47	-0.5
106,919	-		MPMX19_04718	0.47	+0.6
106,967	-		MPMX19_04718	0.51	+1.4
106,967	-		MPMX19_04718	0.51	-0.8
107,026	+		MPMX19_04718	0.56	+0.3
107,026	+		MPMX19_04718	0.56	-0.2
107,026	+		MPMX19_04718	0.56	-0.1
107,026	+		MPMX19_04718	0.56	-0.2
107,026	+		MPMX19_04718	0.56	-1.0
107,026	+		MPMX19_04718	0.56	-0.3
107,026	+		MPMX19_04718	0.56	-0.6
107,027	-		MPMX19_04718	0.56	-0.7
107,052	+		MPMX19_04718	0.58	-1.6
107,052	+		MPMX19_04718	0.58	+0.4
107,052	+		MPMX19_04718	0.58	-0.4
107,052	+		MPMX19_04718	0.58	-0.4
107,099	+		MPMX19_04718	0.61	-0.5
107,099	+		MPMX19_04718	0.61	+0.5
107,100	-		MPMX19_04718	0.62	-0.4
107,100	-		MPMX19_04718	0.62	+0.3
107,100	-		MPMX19_04718	0.62	-0.8
107,100	-		MPMX19_04718	0.62	+0.2
107,467	+				+0.2
107,468	-				-1.8
107,468	-				-0.7
107,483	-				-1.4
107,483	-				-0.4
107,483	-				+1.0
107,492	-				+0.1
107,492	-				-0.7
107,527	+				-0.4
107,527	+				+0.7
107,527	+				-1.7
107,527	+				-1.4
107,527	+				-0.8
107,527	+				-0.6
107,527	+				-0.9
107,527	+				-1.0
107,527	+				-0.3
107,527	+				+0.2
107,527	+				-0.5
107,528	-				-0.2
107,528	-				-0.5
107,528	-				+0.9
107,528	-				-0.5
107,528	-				+0.6
107,528	-				-1.8
107,528	-				-2.3
107,858	-		MPMX19_04719	0.16	+0.2
107,885	+		MPMX19_04719	0.19	-0.8
107,885	+		MPMX19_04719	0.19	-0.0
107,886	-		MPMX19_04719	0.19	-0.2
107,886	-		MPMX19_04719	0.19	-0.0
107,886	-		MPMX19_04719	0.19	+0.6
108,347	+		MPMX19_04719	0.60	+0.1
108,347	+		MPMX19_04719	0.60	+1.8
108,347	+		MPMX19_04719	0.60	+0.3
108,347	+		MPMX19_04719	0.60	-0.6
108,347	+		MPMX19_04719	0.60	+0.2
108,347	+		MPMX19_04719	0.60	+0.2
108,347	+		MPMX19_04719	0.60	+0.4
108,347	+		MPMX19_04719	0.60	-0.8
108,347	+		MPMX19_04719	0.60	-0.6
108,347	+		MPMX19_04719	0.60	+0.9
108,347	+		MPMX19_04719	0.60	-0.1
108,347	+		MPMX19_04719	0.60	-0.2
108,347	+		MPMX19_04719	0.60	+0.8
108,348	-		MPMX19_04719	0.60	-0.7
108,348	-		MPMX19_04719	0.60	+1.0
108,348	-		MPMX19_04719	0.60	-0.7
108,348	-		MPMX19_04719	0.60	-0.8
108,348	-		MPMX19_04719	0.60	+0.5
108,348	-		MPMX19_04719	0.60	-0.2
108,348	-		MPMX19_04719	0.60	+0.4
108,348	-		MPMX19_04719	0.60	+0.2
108,348	-		MPMX19_04719	0.60	+0.3
108,348	-		MPMX19_04719	0.60	+0.0
108,348	-		MPMX19_04719	0.60	-0.3
108,348	-		MPMX19_04719	0.60	+0.0
108,348	-		MPMX19_04719	0.60	+0.2
108,348	-		MPMX19_04719	0.60	-0.5
108,795	-				+0.8
108,841	+				+1.8
108,842	-				-0.5
108,842	-				+0.5
108,842	-				-0.0
108,842	-				+0.5
109,189	+		MPMX19_04720	0.27	-1.2
109,189	+		MPMX19_04720	0.27	+1.5
109,189	+		MPMX19_04720	0.27	+0.8
109,189	+		MPMX19_04720	0.27	+0.8
109,189	+		MPMX19_04720	0.27	-0.5
109,189	+		MPMX19_04720	0.27	-1.7
109,189	+		MPMX19_04720	0.27	-0.4
109,189	+		MPMX19_04720	0.27	+1.1
109,189	+		MPMX19_04720	0.27	+0.1
109,189	+		MPMX19_04720	0.27	-0.3
109,190	-		MPMX19_04720	0.27	-1.2
109,190	-		MPMX19_04720	0.27	-2.1
109,190	-		MPMX19_04720	0.27	+0.1
109,190	-		MPMX19_04720	0.27	-0.8
109,190	-		MPMX19_04720	0.27	+0.8
109,190	-		MPMX19_04720	0.27	+0.0
109,252	+		MPMX19_04720	0.33	+0.2
109,252	+		MPMX19_04720	0.33	-0.8
109,253	-		MPMX19_04720	0.33	+1.0
109,253	-		MPMX19_04720	0.33	-0.1
109,253	-		MPMX19_04720	0.33	+0.8
109,253	-		MPMX19_04720	0.33	+0.2
109,253	-		MPMX19_04720	0.33	+0.0
109,273	+		MPMX19_04720	0.34	-0.4
109,273	+		MPMX19_04720	0.34	+0.2
109,273	+		MPMX19_04720	0.34	+1.3
109,274	-		MPMX19_04720	0.34	+0.2
109,274	-		MPMX19_04720	0.34	-0.0
109,364	-		MPMX19_04720	0.42	-0.5
109,364	-		MPMX19_04720	0.42	-0.2
109,423	+		MPMX19_04720	0.47	-0.6
109,423	+		MPMX19_04720	0.47	+0.2
109,423	+		MPMX19_04720	0.47	+0.8
109,423	+		MPMX19_04720	0.47	+0.3
109,423	+		MPMX19_04720	0.47	-0.4
109,423	+		MPMX19_04720	0.47	-0.1
109,423	+		MPMX19_04720	0.47	+0.3
109,423	+		MPMX19_04720	0.47	+0.6
109,424	-		MPMX19_04720	0.47	-1.9
109,424	-		MPMX19_04720	0.47	-1.5
109,424	-		MPMX19_04720	0.47	+0.0
109,424	-		MPMX19_04720	0.47	+0.9
109,424	-		MPMX19_04720	0.47	-0.2
109,424	-		MPMX19_04720	0.47	-0.0
109,424	-		MPMX19_04720	0.47	-0.5
109,424	-		MPMX19_04720	0.47	+0.6
109,424	-		MPMX19_04720	0.47	+0.2
109,424	-		MPMX19_04720	0.47	-0.1
109,424	-		MPMX19_04720	0.47	+0.8
109,424	-		MPMX19_04720	0.47	-0.7
109,424	-		MPMX19_04720	0.47	+0.0
109,424	-		MPMX19_04720	0.47	-0.1
109,424	-		MPMX19_04720	0.47	-0.9
109,424	-		MPMX19_04720	0.47	-0.5
109,424	-		MPMX19_04720	0.47	-1.0
109,756	+		MPMX19_04720	0.75	-0.0
109,756	+		MPMX19_04720	0.75	+0.9
109,756	+		MPMX19_04720	0.75	-0.0
109,756	+		MPMX19_04720	0.75	-2.2
109,756	+		MPMX19_04720	0.75	+1.2
109,756	+		MPMX19_04720	0.75	+0.5
109,756	+		MPMX19_04720	0.75	-0.5
109,756	+		MPMX19_04720	0.75	+1.6
109,756	+		MPMX19_04720	0.75	+0.4
109,757	-		MPMX19_04720	0.75	-2.0
109,757	-		MPMX19_04720	0.75	+0.0
109,757	-		MPMX19_04720	0.75	-0.0
109,757	-		MPMX19_04720	0.75	+0.8
109,757	-		MPMX19_04720	0.75	+1.2
109,757	-		MPMX19_04720	0.75	-0.0
109,757	-		MPMX19_04720	0.75	+0.2
109,757	-		MPMX19_04720	0.75	+2.1
109,757	-		MPMX19_04720	0.75	-0.7
109,757	-		MPMX19_04720	0.75	-0.4
109,757	-		MPMX19_04720	0.75	+0.3
109,757	-		MPMX19_04720	0.75	-0.5
109,757	-		MPMX19_04720	0.75	-0.2
109,757	-		MPMX19_04720	0.75	-0.4
109,757	-		MPMX19_04720	0.75	+0.2
109,757	-		MPMX19_04720	0.75	-0.4
109,757	-		MPMX19_04720	0.75	+0.8
109,757	-		MPMX19_04720	0.75	+0.0
109,757	-		MPMX19_04720	0.75	-0.7
109,757	-		MPMX19_04720	0.75	-0.2
109,759	+		MPMX19_04720	0.75	+0.9
109,760	-		MPMX19_04720	0.75	+0.6
109,781	-		MPMX19_04720	0.77	+0.5