Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02782

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
14,585	+		MPMX19_02781	0.69	+0.8
14,585	+		MPMX19_02781	0.69	-0.6
14,585	+		MPMX19_02781	0.69	-1.5
14,585	+		MPMX19_02781	0.69	-1.1
14,585	+		MPMX19_02781	0.69	-0.6
14,585	+		MPMX19_02781	0.69	+0.4
14,585	+		MPMX19_02781	0.69	+0.1
14,585	+		MPMX19_02781	0.69	-0.4
14,585	+		MPMX19_02781	0.69	+0.6
14,585	+		MPMX19_02781	0.69	+2.0
14,585	+		MPMX19_02781	0.69	-1.8
14,585	+		MPMX19_02781	0.69	-0.1
14,585	+		MPMX19_02781	0.69	+0.4
14,585	+		MPMX19_02781	0.69	-0.8
14,585	+		MPMX19_02781	0.69	-0.3
14,585	+		MPMX19_02781	0.69	-1.5
14,585	+		MPMX19_02781	0.69	-1.3
14,586	-		MPMX19_02781	0.69	-1.8
14,586	-		MPMX19_02781	0.69	-0.1
14,586	-		MPMX19_02781	0.69	+0.8
14,586	-		MPMX19_02781	0.69	-1.1
14,586	-		MPMX19_02781	0.69	-0.9
14,586	-		MPMX19_02781	0.69	-0.2
14,586	-		MPMX19_02781	0.69	+0.9
14,586	-		MPMX19_02781	0.69	+0.4
14,586	-		MPMX19_02781	0.69	-1.1
14,586	-		MPMX19_02781	0.69	-0.5
14,586	-		MPMX19_02781	0.69	-1.3
14,586	-		MPMX19_02781	0.69	+0.8
14,586	-		MPMX19_02781	0.69	-0.2
14,793	+		MPMX19_02781	0.77	+2.5
14,793	+		MPMX19_02781	0.77	+0.7
14,793	+		MPMX19_02781	0.77	+0.3
14,793	+		MPMX19_02781	0.77	+0.8
14,794	-		MPMX19_02781	0.77	-0.3
14,794	-		MPMX19_02781	0.77	-0.2
14,794	-		MPMX19_02781	0.77	+0.6
15,087	+		MPMX19_02781	0.88	-0.1
15,087	+		MPMX19_02781	0.88	-1.5
15,087	+		MPMX19_02781	0.88	-0.7
15,087	+		MPMX19_02781	0.88	-1.8
15,087	+		MPMX19_02781	0.88	-0.5
15,087	+		MPMX19_02781	0.88	+1.8
15,087	+		MPMX19_02781	0.88	-1.4
15,087	+		MPMX19_02781	0.88	-2.2
15,088	-		MPMX19_02781	0.88	-0.6
15,088	-		MPMX19_02781	0.88	-1.3
15,088	-		MPMX19_02781	0.88	-1.2
15,186	+				-0.1
15,186	+				-0.8
15,186	+				-0.0
15,186	+				-0.4
15,186	+				-2.4
15,186	+				-1.2
15,186	+				+1.2
15,186	+				-1.6
15,186	+				+0.8
15,186	+				-0.8
15,186	+				-1.7
15,186	+				-0.4
15,186	+				+1.3
15,186	+				-1.8
15,186	+				-1.7
15,186	+				-0.1
15,186	+				-1.5
15,186	+				-2.1
15,186	+				+0.8
15,186	+				-0.6
15,186	+				+0.2
15,186	+				-0.8
15,186	+				-1.0
15,186	+				+0.3
15,186	+				-0.1
15,187	-				+0.0
15,187	-				-1.9
15,187	-				-0.1
15,187	-				-0.8
15,187	-				-0.1
15,187	-				-0.1
15,187	-				-0.5
15,187	-				-0.5
15,187	-				-1.1
15,472	+				-0.7
15,472	+				-0.9
15,494	+				-1.4
15,495	-				+0.0
15,724	+		MPMX19_02782	0.18	-0.2
15,724	+		MPMX19_02782	0.18	-1.9
15,724	+		MPMX19_02782	0.18	-0.0
15,724	+		MPMX19_02782	0.18	-0.0
15,724	+		MPMX19_02782	0.18	+0.0
15,725	-		MPMX19_02782	0.18	+0.4
15,725	-		MPMX19_02782	0.18	+0.8
15,725	-		MPMX19_02782	0.18	-0.5
15,725	-		MPMX19_02782	0.18	-0.5
15,725	-		MPMX19_02782	0.18	+0.6
15,725	-		MPMX19_02782	0.18	-0.6
15,889	+		MPMX19_02782	0.40	-0.7
15,890	-		MPMX19_02782	0.40	-0.6
15,890	-		MPMX19_02782	0.40	+0.6
15,890	-		MPMX19_02782	0.40	+1.6
15,890	-		MPMX19_02782	0.40	-1.7
15,890	-		MPMX19_02782	0.40	-0.2
16,027	+		MPMX19_02782	0.58	-0.2
16,028	-		MPMX19_02782	0.58	-0.0
16,028	-		MPMX19_02782	0.58	-0.6
16,028	-		MPMX19_02782	0.58	-1.0
16,028	-		MPMX19_02782	0.58	-0.4
16,028	-		MPMX19_02782	0.58	-0.6
16,028	-		MPMX19_02782	0.58	-1.9
16,028	-		MPMX19_02782	0.58	-2.2
16,084	+		MPMX19_02782	0.65	-1.7
16,084	+		MPMX19_02782	0.65	-0.1
16,084	+		MPMX19_02782	0.65	+0.1
16,084	+		MPMX19_02782	0.65	-0.5
16,084	+		MPMX19_02782	0.65	+0.5
16,084	+		MPMX19_02782	0.65	+0.2
16,084	+		MPMX19_02782	0.65	-1.7
16,084	+		MPMX19_02782	0.65	+0.0
16,084	+		MPMX19_02782	0.65	+1.2
16,085	-		MPMX19_02782	0.65	+1.2
16,085	-		MPMX19_02782	0.65	-0.2
16,085	-		MPMX19_02782	0.65	-1.1
16,085	-		MPMX19_02782	0.65	-0.7
16,085	-		MPMX19_02782	0.65	-0.7
16,126	+		MPMX19_02782	0.71	-0.1
16,126	+		MPMX19_02782	0.71	+0.1
16,127	-		MPMX19_02782	0.71	-0.5
16,127	-		MPMX19_02782	0.71	-0.8
16,246	+		MPMX19_02782	0.86	-1.2
16,246	+		MPMX19_02782	0.86	+0.2
16,246	+		MPMX19_02782	0.86	+0.1
16,246	+		MPMX19_02782	0.86	-0.8
16,246	+		MPMX19_02782	0.86	-0.5
16,247	-		MPMX19_02782	0.87	-0.3
16,392	+				-1.1
16,392	+				+1.1
16,392	+				-0.1
16,393	-				+0.1
16,393	-				-1.2
16,393	-				-1.0
16,418	-				+0.9
16,678	+		MPMX19_02783	0.24	-1.9
16,678	+		MPMX19_02783	0.24	+0.3
16,678	+		MPMX19_02783	0.24	-0.2
16,678	+		MPMX19_02783	0.24	+0.1
16,678	+		MPMX19_02783	0.24	-0.4
16,678	+		MPMX19_02783	0.24	-0.6
16,679	-		MPMX19_02783	0.24	-2.3
16,679	-		MPMX19_02783	0.24	+0.8
16,972	+		MPMX19_02783	0.55	-0.8
16,972	+		MPMX19_02783	0.55	-1.1
16,972	+		MPMX19_02783	0.55	+0.3
16,972	+		MPMX19_02783	0.55	-1.2
16,972	+		MPMX19_02783	0.55	-0.9
16,973	-		MPMX19_02783	0.55	+1.0
16,973	-		MPMX19_02783	0.55	+0.2
16,973	-		MPMX19_02783	0.55	+0.2
16,973	-		MPMX19_02783	0.55	-0.4
16,973	-		MPMX19_02783	0.55	-1.4
17,035	+		MPMX19_02783	0.62	-0.1
17,035	+		MPMX19_02783	0.62	+1.2
17,035	+		MPMX19_02783	0.62	+0.2
17,035	+		MPMX19_02783	0.62	-0.3
17,035	+		MPMX19_02783	0.62	-0.9
17,036	-		MPMX19_02783	0.62	+0.1
17,036	-		MPMX19_02783	0.62	+0.2
17,036	-		MPMX19_02783	0.62	+1.8
17,036	-		MPMX19_02783	0.62	-0.7
17,036	-		MPMX19_02783	0.62	+0.4
17,036	-		MPMX19_02783	0.62	-0.8
17,041	+		MPMX19_02783	0.63	+0.3
17,042	-		MPMX19_02783	0.63	-1.1
17,266	+		MPMX19_02783	0.87	-1.6
17,266	+		MPMX19_02783	0.87	-1.8
17,266	+		MPMX19_02783	0.87	-0.4
17,266	+		MPMX19_02783	0.87	-2.1
17,266	+		MPMX19_02783	0.87	-2.9
17,267	-		MPMX19_02783	0.87	-0.6
17,267	-		MPMX19_02783	0.87	+0.3
17,267	-		MPMX19_02783	0.87	-0.2
17,267	-		MPMX19_02783	0.87	+0.8
17,267	-		MPMX19_02783	0.87	-0.7
17,267	-		MPMX19_02783	0.87	-1.6
17,267	-		MPMX19_02783	0.87	+0.1
17,274	-		MPMX19_02783	0.87	-0.9
17,274	-		MPMX19_02783	0.87	-0.8
17,312	+				+1.1
17,312	+				+0.8