Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01833

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,912,789	+				-0.1
1,912,789	+				-1.2
1,912,789	+				-0.8
1,912,789	+				-0.8
1,912,789	+				+0.3
1,912,789	+				-0.4
1,912,789	+				+0.2
1,912,789	+				+1.6
1,912,789	+				+0.8
1,912,789	+				-1.0
1,912,789	+				-0.1
1,912,789	+				-1.0
1,912,789	+				+0.2
1,912,790	-				+0.4
1,912,790	-				+0.4
1,912,790	-				-0.6
1,912,790	-				-1.0
1,912,790	-				-0.9
1,912,790	-				-2.2
1,912,790	-				-0.2
1,912,790	-				-0.6
1,912,790	-				-1.0
1,912,790	-				-1.1
1,912,868	+		MPMX19_01832	0.12	-0.7
1,912,869	-		MPMX19_01832	0.12	+0.3
1,912,869	-		MPMX19_01832	0.12	+1.3
1,912,869	-		MPMX19_01832	0.12	+0.3
1,913,111	+		MPMX19_01832	0.43	-0.5
1,913,111	+		MPMX19_01832	0.43	+0.9
1,913,111	+		MPMX19_01832	0.43	-0.9
1,913,111	+		MPMX19_01832	0.43	+0.6
1,913,111	+		MPMX19_01832	0.43	+1.0
1,913,112	-		MPMX19_01832	0.43	+0.2
1,913,112	-		MPMX19_01832	0.43	-1.2
1,913,112	-		MPMX19_01832	0.43	-0.4
1,913,565	+				-1.9
1,913,565	+				+1.0
1,913,604	+				+0.0
1,913,604	+				-1.1
1,913,604	+				+0.5
1,913,604	+				-0.7
1,913,604	+				-0.7
1,913,604	+				-1.2
1,913,604	+				-0.7
1,913,605	-				-1.2
1,913,605	-				-0.7
1,913,605	-				+0.0
1,913,605	-				+0.2
1,913,605	-				+0.6
1,913,605	-				-0.7
1,913,605	-				+0.6
1,913,605	-				-1.0
1,913,605	-				+0.6
1,913,605	-				-0.3
1,913,605	-				+0.6
1,913,659	+				+0.2
1,913,659	+				-1.1
1,913,660	-				-1.4
1,913,660	-				-1.7
1,913,660	-				-0.5
1,914,032	+		MPMX19_01833	0.13	-0.2
1,914,033	-		MPMX19_01833	0.14	+0.3
1,914,140	+		MPMX19_01833	0.18	+0.2
1,914,140	+		MPMX19_01833	0.18	-0.4
1,914,140	+		MPMX19_01833	0.18	-0.3
1,914,140	+		MPMX19_01833	0.18	-1.0
1,914,140	+		MPMX19_01833	0.18	-1.5
1,914,140	+		MPMX19_01833	0.18	-0.7
1,914,140	+		MPMX19_01833	0.18	+0.2
1,914,140	+		MPMX19_01833	0.18	-2.0
1,914,140	+		MPMX19_01833	0.18	+0.3
1,914,140	+		MPMX19_01833	0.18	+0.2
1,914,140	+		MPMX19_01833	0.18	+0.3
1,914,140	+		MPMX19_01833	0.18	-0.7
1,914,140	+		MPMX19_01833	0.18	+0.8
1,914,140	+		MPMX19_01833	0.18	-1.3
1,914,140	+		MPMX19_01833	0.18	-0.3
1,914,140	+		MPMX19_01833	0.18	-0.5
1,914,140	+		MPMX19_01833	0.18	-2.1
1,914,140	+		MPMX19_01833	0.18	+0.5
1,914,140	+		MPMX19_01833	0.18	+0.4
1,914,140	+		MPMX19_01833	0.18	-0.6
1,914,140	+		MPMX19_01833	0.18	+0.4
1,914,140	+		MPMX19_01833	0.18	-0.4
1,914,140	+		MPMX19_01833	0.18	-0.8
1,914,140	+		MPMX19_01833	0.18	-0.7
1,914,140	+		MPMX19_01833	0.18	-0.2
1,914,140	+		MPMX19_01833	0.18	-0.5
1,914,140	+		MPMX19_01833	0.18	+0.8
1,914,141	-		MPMX19_01833	0.19	+1.3
1,914,141	-		MPMX19_01833	0.19	-0.6
1,914,141	-		MPMX19_01833	0.19	-0.6
1,914,141	-		MPMX19_01833	0.19	-0.7
1,914,141	-		MPMX19_01833	0.19	+1.3
1,914,141	-		MPMX19_01833	0.19	+0.1
1,914,141	-		MPMX19_01833	0.19	-2.5
1,914,141	-		MPMX19_01833	0.19	-1.0
1,914,141	-		MPMX19_01833	0.19	-0.1
1,914,141	-		MPMX19_01833	0.19	+0.1
1,914,141	-		MPMX19_01833	0.19	+0.0
1,914,141	-		MPMX19_01833	0.19	-0.8
1,914,141	-		MPMX19_01833	0.19	-0.3
1,914,141	-		MPMX19_01833	0.19	-0.6
1,914,141	-		MPMX19_01833	0.19	-1.5
1,914,141	-		MPMX19_01833	0.19	+0.6
1,914,141	-		MPMX19_01833	0.19	-0.2
1,914,141	-		MPMX19_01833	0.19	-0.9
1,914,323	+		MPMX19_01833	0.27	+0.2
1,914,323	+		MPMX19_01833	0.27	-0.7
1,914,323	+		MPMX19_01833	0.27	-0.4
1,914,323	+		MPMX19_01833	0.27	-0.3
1,914,323	+		MPMX19_01833	0.27	+1.9
1,914,323	+		MPMX19_01833	0.27	+0.0
1,914,323	+		MPMX19_01833	0.27	+0.4
1,914,323	+		MPMX19_01833	0.27	+0.0
1,914,323	+		MPMX19_01833	0.27	+0.7
1,914,324	-		MPMX19_01833	0.27	+0.3
1,914,324	-		MPMX19_01833	0.27	-1.0
1,914,324	-		MPMX19_01833	0.27	+0.0
1,914,324	-		MPMX19_01833	0.27	+0.6
1,914,324	-		MPMX19_01833	0.27	-0.6
1,914,324	-		MPMX19_01833	0.27	-1.1
1,914,338	+		MPMX19_01833	0.28	-1.2
1,914,338	+		MPMX19_01833	0.28	+0.6
1,914,339	-		MPMX19_01833	0.28	-0.2
1,914,339	-		MPMX19_01833	0.28	-0.4
1,914,339	-		MPMX19_01833	0.28	-0.7
1,914,560	+		MPMX19_01833	0.38	+0.2
1,914,560	+		MPMX19_01833	0.38	-0.4
1,914,560	+		MPMX19_01833	0.38	-1.2
1,914,560	+		MPMX19_01833	0.38	-0.5
1,914,560	+		MPMX19_01833	0.38	+0.9
1,914,560	+		MPMX19_01833	0.38	+1.1
1,914,560	+		MPMX19_01833	0.38	-0.6
1,914,560	+		MPMX19_01833	0.38	-0.9
1,914,560	+		MPMX19_01833	0.38	-0.4
1,914,560	+		MPMX19_01833	0.38	-0.4
1,914,560	+		MPMX19_01833	0.38	+0.6
1,914,560	+		MPMX19_01833	0.38	-0.3
1,914,560	-		MPMX19_01833	0.38	-1.5
1,914,561	-		MPMX19_01833	0.38	-1.2
1,914,561	-		MPMX19_01833	0.38	-0.5
1,914,561	-		MPMX19_01833	0.38	-0.4
1,914,561	-		MPMX19_01833	0.38	+0.8
1,914,561	-		MPMX19_01833	0.38	-0.6
1,914,561	-		MPMX19_01833	0.38	+0.7
1,914,561	-		MPMX19_01833	0.38	+0.1
1,914,561	-		MPMX19_01833	0.38	+0.1
1,914,562	+		MPMX19_01833	0.38	+0.1
1,914,562	+		MPMX19_01833	0.38	-0.5
1,914,562	+		MPMX19_01833	0.38	+0.0
1,914,562	+		MPMX19_01833	0.38	-0.2
1,914,562	+		MPMX19_01833	0.38	-1.8
1,914,562	+		MPMX19_01833	0.38	-1.3
1,914,562	+		MPMX19_01833	0.38	+0.5
1,914,563	-		MPMX19_01833	0.38	-0.5
1,914,563	-		MPMX19_01833	0.38	+0.7
1,914,563	-		MPMX19_01833	0.38	-0.5
1,914,563	-		MPMX19_01833	0.38	+0.3
1,914,563	-		MPMX19_01833	0.38	-1.0
1,914,563	-		MPMX19_01833	0.38	+0.6
1,914,563	-		MPMX19_01833	0.38	+0.9
1,914,563	-		MPMX19_01833	0.38	+0.3
1,914,587	+		MPMX19_01833	0.39	-1.1
1,914,587	+		MPMX19_01833	0.39	+0.6
1,914,587	+		MPMX19_01833	0.39	+0.3
1,914,587	+		MPMX19_01833	0.39	-0.7
1,914,587	+		MPMX19_01833	0.39	+0.1
1,914,587	+		MPMX19_01833	0.39	-1.1
1,914,587	+		MPMX19_01833	0.39	-0.3
1,914,587	+		MPMX19_01833	0.39	-0.2
1,914,587	+		MPMX19_01833	0.39	+0.0
1,914,587	+		MPMX19_01833	0.39	-0.7
1,914,587	+		MPMX19_01833	0.39	-1.2
1,914,587	+		MPMX19_01833	0.39	+0.4
1,914,588	-		MPMX19_01833	0.39	+0.4
1,914,588	-		MPMX19_01833	0.39	-1.9
1,914,588	-		MPMX19_01833	0.39	+0.2
1,914,588	-		MPMX19_01833	0.39	-1.5
1,914,588	-		MPMX19_01833	0.39	-0.7
1,914,588	-		MPMX19_01833	0.39	-1.5
1,914,588	-		MPMX19_01833	0.39	+1.2
1,914,588	-		MPMX19_01833	0.39	-0.7
1,914,588	-		MPMX19_01833	0.39	-2.6
1,914,588	-		MPMX19_01833	0.39	+0.4
1,914,588	-		MPMX19_01833	0.39	-0.8
1,914,596	+		MPMX19_01833	0.39	+0.2
1,914,596	+		MPMX19_01833	0.39	+0.2
1,914,596	+		MPMX19_01833	0.39	+0.6
1,914,596	+		MPMX19_01833	0.39	-0.2
1,914,596	+		MPMX19_01833	0.39	-1.0
1,914,597	-		MPMX19_01833	0.39	-0.4
1,914,597	-		MPMX19_01833	0.39	+0.7
1,914,597	-		MPMX19_01833	0.39	+0.1
1,914,597	-		MPMX19_01833	0.39	-1.1
1,914,597	-		MPMX19_01833	0.39	-1.1
1,914,597	-		MPMX19_01833	0.39	-0.1
1,914,707	+		MPMX19_01833	0.44	+0.2
1,914,708	-		MPMX19_01833	0.45	-0.9
1,914,708	-		MPMX19_01833	0.45	+0.0
1,914,708	-		MPMX19_01833	0.45	-0.2
1,915,367	+		MPMX19_01833	0.75	+0.5
1,915,367	+		MPMX19_01833	0.75	-0.9
1,915,367	+		MPMX19_01833	0.75	+0.0
1,915,367	+		MPMX19_01833	0.75	-0.9
1,915,367	+		MPMX19_01833	0.75	+0.1
1,915,367	+		MPMX19_01833	0.75	+0.2
1,915,367	+		MPMX19_01833	0.75	+0.5
1,915,367	+		MPMX19_01833	0.75	-1.4
1,915,368	-		MPMX19_01833	0.75	-1.6
1,915,368	-		MPMX19_01833	0.75	-0.1
1,915,368	-		MPMX19_01833	0.75	+0.4
1,915,368	-		MPMX19_01833	0.75	+0.4
1,915,368	-		MPMX19_01833	0.75	+0.0
1,915,368	-		MPMX19_01833	0.75	+0.3
1,915,368	-		MPMX19_01833	0.75	+0.3
1,915,402	+		MPMX19_01833	0.76	+0.7
1,915,403	-		MPMX19_01833	0.76	-1.3
1,915,403	-		MPMX19_01833	0.76	+0.8
1,915,403	-		MPMX19_01833	0.76	+0.2
1,915,763	+				-0.7
1,916,090	+		MPMX19_01834	0.76	-1.4
1,916,090	+		MPMX19_01834	0.76	-1.0
1,916,091	-		MPMX19_01834	0.76	-2.4
1,916,250	+				-0.2
1,916,250	+				-0.5
1,916,251	-				-0.4
1,916,251	-				-0.4
1,916,251	-				-1.6
1,916,251	-				-1.6
1,916,251	-				+0.4
1,916,251	-				-0.7
1,916,251	-				-1.4
1,916,251	-				-0.7
1,916,387	-		MPMX19_01835	0.21	+0.0
1,916,652	+				-0.5
1,916,652	+				-1.6
1,916,652	+				-1.0
1,916,652	+				+1.0
1,916,652	+				-0.3
1,916,652	+				-1.0
1,916,652	+				-0.4
1,916,652	+				-1.4
1,916,652	+				-0.2
1,916,652	+				-0.9
1,916,652	+				-0.1
1,916,652	+				-0.3
1,916,652	+				+0.4
1,916,652	+				-0.3
1,916,652	+				-0.3
1,916,652	+				-0.7
1,916,652	+				+0.6
1,916,652	+				+1.3
1,916,652	+				+0.0
1,916,652	+				+1.0
1,916,652	+				+1.2
1,916,653	-				-0.9
1,916,653	-				-2.2
1,916,653	-				-0.8
1,916,653	-				-0.6
1,916,653	-				-1.6
1,916,653	-				+0.3
1,916,653	-				+1.0
1,916,653	-				+0.6
1,916,653	-				-0.3
1,916,653	-				-0.6
1,916,653	-				-0.9
1,916,653	-				+0.3
1,916,653	-				-1.3
1,916,653	-				-0.7
1,916,653	-				-0.9
1,916,653	-				-0.2