Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01766

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,851,993	+		MPMX19_01764	0.68	-0.6
1,851,994	-		MPMX19_01764	0.68	-1.1
1,851,994	-		MPMX19_01764	0.68	+0.2
1,852,498	+				+0.5
1,852,498	+				+0.0
1,852,498	+				-0.2
1,852,499	-				+0.0
1,852,552	+		MPMX19_01765	0.13	-1.0
1,852,552	+		MPMX19_01765	0.13	-1.8
1,852,552	+		MPMX19_01765	0.13	+1.0
1,852,552	+		MPMX19_01765	0.13	-1.5
1,852,552	+		MPMX19_01765	0.13	-0.4
1,852,552	+		MPMX19_01765	0.13	-2.0
1,852,552	+		MPMX19_01765	0.13	-2.0
1,852,552	+		MPMX19_01765	0.13	+1.0
1,852,552	+		MPMX19_01765	0.13	-0.4
1,852,553	-		MPMX19_01765	0.13	-0.4
1,852,553	-		MPMX19_01765	0.13	-0.4
1,852,553	-		MPMX19_01765	0.13	-0.7
1,852,553	-		MPMX19_01765	0.13	+0.6
1,852,633	+		MPMX19_01765	0.38	-0.7
1,852,633	+		MPMX19_01765	0.38	-0.3
1,852,633	+		MPMX19_01765	0.38	-0.1
1,852,633	+		MPMX19_01765	0.38	-0.6
1,852,633	+		MPMX19_01765	0.38	-0.4
1,852,633	+		MPMX19_01765	0.38	-1.2
1,852,633	+		MPMX19_01765	0.38	-1.8
1,852,633	+		MPMX19_01765	0.38	+0.0
1,852,633	+		MPMX19_01765	0.38	-2.3
1,852,633	+		MPMX19_01765	0.38	+0.5
1,852,633	+		MPMX19_01765	0.38	-2.1
1,852,633	+		MPMX19_01765	0.38	+0.0
1,852,633	+		MPMX19_01765	0.38	+0.0
1,852,633	+		MPMX19_01765	0.38	-1.5
1,852,633	+		MPMX19_01765	0.38	-0.3
1,852,633	+		MPMX19_01765	0.38	-0.5
1,852,633	+		MPMX19_01765	0.38	-0.2
1,852,633	+		MPMX19_01765	0.38	-0.0
1,852,633	+		MPMX19_01765	0.38	+1.3
1,852,634	-		MPMX19_01765	0.38	+0.3
1,852,634	-		MPMX19_01765	0.38	+0.0
1,852,634	-		MPMX19_01765	0.38	-1.0
1,852,634	-		MPMX19_01765	0.38	-0.3
1,852,634	-		MPMX19_01765	0.38	+0.2
1,852,634	-		MPMX19_01765	0.38	+1.1
1,852,634	-		MPMX19_01765	0.38	-1.3
1,852,634	-		MPMX19_01765	0.38	-0.5
1,852,634	-		MPMX19_01765	0.38	+0.6
1,852,634	-		MPMX19_01765	0.38	-0.4
1,852,634	-		MPMX19_01765	0.38	-1.5
1,852,634	-		MPMX19_01765	0.38	-1.2
1,852,634	-		MPMX19_01765	0.38	-1.6
1,852,634	-		MPMX19_01765	0.38	-0.4
1,852,634	-		MPMX19_01765	0.38	-0.0
1,852,634	-		MPMX19_01765	0.38	-1.2
1,852,634	-		MPMX19_01765	0.38	+0.7
1,852,634	-		MPMX19_01765	0.38	-0.8
1,852,634	-		MPMX19_01765	0.38	+0.0
1,852,724	+		MPMX19_01765	0.66	+0.2
1,852,724	+		MPMX19_01765	0.66	+0.8
1,852,725	-		MPMX19_01765	0.66	-0.6
1,852,810	+				-0.8
1,852,810	+				-0.0
1,852,810	+				-0.5
1,852,810	+				+0.9
1,852,810	+				-1.0
1,852,810	+				+0.0
1,852,810	+				-0.7
1,852,811	-				+1.2
1,852,811	-				-1.3
1,852,811	-				-1.4
1,852,811	-				+0.4
1,852,811	-				+0.1
1,852,811	-				-0.5
1,852,811	-				-0.3
1,852,811	-				-0.7
1,852,811	-				-0.7
1,852,811	-				+0.4
1,852,811	-				+0.4
1,852,811	-				+0.6
1,852,882	+				+0.0
1,852,882	+				-0.8
1,852,883	-				-2.1
1,852,883	-				-0.6
1,852,907	+				+0.3
1,852,907	+				-0.4
1,852,907	+				+0.0
1,852,907	+				-0.9
1,852,907	+				+0.3
1,852,907	+				-0.8
1,852,907	+				-1.6
1,852,907	+				+2.0
1,852,907	+				-1.3
1,852,907	+				+0.8
1,852,907	+				-0.2
1,852,907	+				-0.6
1,852,907	+				-0.4
1,852,907	+				+0.2
1,852,907	+				-0.8
1,852,907	+				-0.1
1,852,907	+				-0.6
1,852,907	+				-1.0
1,852,907	+				+0.4
1,852,907	+				-0.2
1,852,907	+				-1.0
1,852,908	-				-0.7
1,852,908	-				-0.5
1,852,908	-				-0.4
1,852,908	-				-1.2
1,852,908	-				-0.8
1,852,908	-				-0.2
1,852,908	-				-1.0
1,852,908	-				-0.7
1,852,908	-				+0.5
1,852,908	-				+0.6
1,852,908	-				-0.6
1,852,908	-				-1.0
1,852,908	-				+0.1
1,852,908	-				-1.1
1,852,908	-				-0.7
1,852,908	-				-1.3
1,852,908	-				-0.7
1,852,908	-				-1.5
1,852,908	-				+1.0
1,852,910	+				-0.6
1,852,910	+				-3.2
1,852,910	+				-0.9
1,852,910	+				-0.1
1,852,910	+				-0.8
1,852,910	+				-1.2
1,852,910	+				-0.5
1,852,911	-				+0.5
1,852,911	-				+0.5
1,852,911	-				-1.0
1,852,911	-				-2.1
1,852,919	+				+0.4
1,852,919	+				-0.2
1,852,920	-				-1.2
1,852,949	+				-0.1
1,852,949	+				+0.9
1,852,949	+				+0.0
1,852,949	+				-1.2
1,852,949	+				+0.2
1,852,949	+				-0.0
1,852,949	+				+0.6
1,852,949	+				+0.9
1,852,949	+				+0.5
1,852,949	+				+1.0
1,852,949	+				-1.7
1,852,949	+				+0.3
1,852,949	+				+0.0
1,852,949	+				+0.2
1,852,949	+				-0.7
1,852,949	+				-0.5
1,852,949	+				+1.0
1,852,949	+				+0.2
1,852,949	+				-0.0
1,852,949	+				+0.0
1,852,949	+				-1.7
1,852,949	+				+0.0
1,852,949	+				-0.4
1,852,950	-				+0.2
1,852,950	-				+0.6
1,852,950	-				-0.2
1,852,950	-				-0.8
1,852,950	-				-0.1
1,852,950	-				-0.4
1,852,950	-				+0.0
1,852,950	-				+0.5
1,852,950	-				-0.5
1,852,950	-				+0.7
1,852,950	-				+1.8
1,852,950	-				+0.2
1,852,950	-				-0.5
1,852,950	-				-0.5
1,852,950	-				-1.0
1,852,950	-				-1.0
1,852,950	-				+0.2
1,852,950	-				-1.2
1,852,950	-				-0.9
1,852,950	-				+0.0
1,852,950	-				-1.2
1,852,950	-				+0.4
1,852,950	-				-0.6
1,852,950	-				-0.4
1,852,950	-				+0.9
1,852,950	-				+0.3
1,852,950	-				+0.1
1,852,950	-				+0.8
1,852,986	+				-0.8
1,852,986	+				+0.9
1,852,986	+				+0.2
1,852,986	+				-0.2
1,852,986	+				+1.2
1,852,986	+				+0.8
1,852,986	+				+1.0
1,852,987	-				-1.4
1,852,987	-				-0.3
1,852,987	-				+0.4
1,852,987	-				-0.7
1,852,987	-				-0.6
1,853,043	+				+1.0
1,853,043	+				-1.8
1,853,043	+				+2.6
1,853,043	+				+0.8
1,853,043	+				+1.1
1,853,043	+				+1.0
1,853,043	+				+1.2
1,853,043	+				+0.6
1,853,044	-				+0.3
1,853,044	-				+0.4
1,853,044	-				-1.2
1,853,044	-				-0.3
1,853,044	-				+0.0
1,853,181	+		MPMX19_01766	0.28	+3.2
1,853,181	+		MPMX19_01766	0.28	+1.0
1,853,181	+		MPMX19_01766	0.28	+0.9
1,853,182	-		MPMX19_01766	0.28	-0.8
1,853,182	-		MPMX19_01766	0.28	+0.8
1,853,182	-		MPMX19_01766	0.28	+0.9
1,853,247	+		MPMX19_01766	0.37	+2.0
1,853,247	+		MPMX19_01766	0.37	+0.6
1,853,247	+		MPMX19_01766	0.37	+1.1
1,853,247	+		MPMX19_01766	0.37	-1.2
1,853,247	+		MPMX19_01766	0.37	+0.6
1,853,247	+		MPMX19_01766	0.37	-0.7
1,853,247	+		MPMX19_01766	0.37	+1.6
1,853,247	+		MPMX19_01766	0.37	+0.0
1,853,247	+		MPMX19_01766	0.37	-0.4
1,853,247	+		MPMX19_01766	0.37	-0.7
1,853,247	+		MPMX19_01766	0.37	-0.7
1,853,247	+		MPMX19_01766	0.37	-0.2
1,853,247	+		MPMX19_01766	0.37	+0.0
1,853,247	+		MPMX19_01766	0.37	+0.8
1,853,247	+		MPMX19_01766	0.37	+0.4
1,853,247	+		MPMX19_01766	0.37	-1.0
1,853,247	+		MPMX19_01766	0.37	+0.6
1,853,247	+		MPMX19_01766	0.37	+1.0
1,853,247	+		MPMX19_01766	0.37	-0.4
1,853,247	+		MPMX19_01766	0.37	+1.5
1,853,247	+		MPMX19_01766	0.37	-0.2
1,853,248	-		MPMX19_01766	0.37	-0.1
1,853,248	-		MPMX19_01766	0.37	+1.6
1,853,248	-		MPMX19_01766	0.37	+0.6
1,853,248	-		MPMX19_01766	0.37	-1.0
1,853,248	-		MPMX19_01766	0.37	+0.6
1,853,248	-		MPMX19_01766	0.37	+0.6
1,853,248	-		MPMX19_01766	0.37	+2.2
1,853,248	-		MPMX19_01766	0.37	+0.4
1,853,248	-		MPMX19_01766	0.37	+0.4
1,853,248	-		MPMX19_01766	0.37	+0.3
1,853,248	-		MPMX19_01766	0.37	-1.2
1,853,248	-		MPMX19_01766	0.37	-1.0
1,853,248	-		MPMX19_01766	0.37	-1.2
1,853,248	-		MPMX19_01766	0.37	+1.6
1,853,459	+		MPMX19_01766	0.65	+2.0
1,853,459	+		MPMX19_01766	0.65	-0.4
1,853,459	+		MPMX19_01766	0.65	-0.2
1,853,459	+		MPMX19_01766	0.65	+2.6
1,853,459	+		MPMX19_01766	0.65	-1.0
1,853,460	-		MPMX19_01766	0.65	+0.2
1,853,460	-		MPMX19_01766	0.65	+1.0
1,853,460	-		MPMX19_01766	0.65	-0.3
1,853,460	-		MPMX19_01766	0.65	-1.5
1,853,460	-		MPMX19_01766	0.65	+0.1
1,853,722	+				+0.6
1,853,722	+				+1.2
1,853,722	+				+0.6
1,853,722	+				+0.6
1,853,722	+				+1.6
1,853,722	+				+0.3
1,853,723	-				-1.8
1,853,723	-				-2.4
1,853,736	+				-0.1
1,853,736	+				-0.2
1,853,737	-				-0.7
1,853,737	-				-1.2
1,853,741	+				-0.0
1,853,741	+				-0.7
1,853,741	+				-0.5
1,853,741	+				-0.4
1,853,741	+				+0.0
1,853,741	+				+1.6
1,853,742	-				+0.1
1,853,742	-				+0.0
1,853,742	-				-1.2
1,853,742	-				+1.6
1,853,742	-				-1.8
1,853,742	-				-1.0
1,853,742	-				-0.1
1,853,742	-				-0.4
1,853,756	+				+0.4
1,853,756	+				-0.1
1,853,756	+				+0.6
1,853,756	+				-0.4
1,853,757	-				-2.3
1,853,757	-				-0.8
1,853,757	-				+0.0
1,853,846	-				-0.2
1,853,846	-				-1.7
1,853,938	+		MPMX19_01767	0.11	+0.2
1,853,938	+		MPMX19_01767	0.11	-1.7
1,853,938	+		MPMX19_01767	0.11	+0.2
1,853,938	+		MPMX19_01767	0.11	-0.7
1,853,938	+		MPMX19_01767	0.11	-0.1
1,853,938	+		MPMX19_01767	0.11	-0.8
1,853,938	+		MPMX19_01767	0.11	-1.7
1,853,938	+		MPMX19_01767	0.11	+0.0
1,853,938	+		MPMX19_01767	0.11	-0.9
1,853,938	+		MPMX19_01767	0.11	-1.1
1,853,938	+		MPMX19_01767	0.11	-1.0
1,853,939	-		MPMX19_01767	0.11	+0.5
1,853,939	-		MPMX19_01767	0.11	-0.7
1,853,939	-		MPMX19_01767	0.11	-0.6
1,853,939	-		MPMX19_01767	0.11	-1.2
1,853,939	-		MPMX19_01767	0.11	-0.9
1,853,939	-		MPMX19_01767	0.11	-0.1
1,853,939	-		MPMX19_01767	0.11	+0.1
1,853,939	-		MPMX19_01767	0.11	+0.8
1,853,939	-		MPMX19_01767	0.11	-1.2
1,853,939	-		MPMX19_01767	0.11	+0.2
1,853,939	-		MPMX19_01767	0.11	-0.5
1,853,939	-		MPMX19_01767	0.11	-1.2
1,853,939	-		MPMX19_01767	0.11	-1.5
1,853,939	-		MPMX19_01767	0.11	-0.2
1,853,939	-		MPMX19_01767	0.11	-1.0
1,853,939	-		MPMX19_01767	0.11	-0.0
1,854,000	+		MPMX19_01767	0.22	-0.4
1,854,000	+		MPMX19_01767	0.22	+0.0
1,854,000	+		MPMX19_01767	0.22	-2.1
1,854,000	+		MPMX19_01767	0.22	-1.4
1,854,000	+		MPMX19_01767	0.22	+0.0
1,854,000	+		MPMX19_01767	0.22	+0.9
1,854,000	+		MPMX19_01767	0.22	-1.1
1,854,000	+		MPMX19_01767	0.22	+1.0
1,854,000	+		MPMX19_01767	0.22	-0.1
1,854,000	+		MPMX19_01767	0.22	+0.0
1,854,000	+		MPMX19_01767	0.22	+0.2
1,854,000	+		MPMX19_01767	0.22	-0.2
1,854,000	+		MPMX19_01767	0.22	-1.2
1,854,000	+		MPMX19_01767	0.22	-1.4
1,854,000	+		MPMX19_01767	0.22	-1.7
1,854,000	+		MPMX19_01767	0.22	-1.8
1,854,000	+		MPMX19_01767	0.22	+1.3
1,854,000	+		MPMX19_01767	0.22	+0.4
1,854,000	+		MPMX19_01767	0.22	+0.5
1,854,000	+		MPMX19_01767	0.22	-2.0
1,854,000	+		MPMX19_01767	0.22	+0.0
1,854,000	+		MPMX19_01767	0.22	+0.0
1,854,000	+		MPMX19_01767	0.22	+0.3
1,854,000	+		MPMX19_01767	0.22	-1.0
1,854,000	+		MPMX19_01767	0.22	+0.0
1,854,000	+		MPMX19_01767	0.22	-0.8
1,854,000	+		MPMX19_01767	0.22	-1.7
1,854,000	+		MPMX19_01767	0.22	-1.1
1,854,000	+		MPMX19_01767	0.22	+1.1
1,854,000	+		MPMX19_01767	0.22	+0.9
1,854,001	-		MPMX19_01767	0.22	+0.6
1,854,001	-		MPMX19_01767	0.22	+0.7
1,854,001	-		MPMX19_01767	0.22	+1.2
1,854,001	-		MPMX19_01767	0.22	+0.4
1,854,001	-		MPMX19_01767	0.22	+0.8
1,854,001	-		MPMX19_01767	0.22	+0.0
1,854,001	-		MPMX19_01767	0.22	+0.8
1,854,001	-		MPMX19_01767	0.22	-1.5
1,854,001	-		MPMX19_01767	0.22	-0.3
1,854,001	-		MPMX19_01767	0.22	+1.0
1,854,001	-		MPMX19_01767	0.22	+0.8
1,854,001	-		MPMX19_01767	0.22	+0.2
1,854,001	-		MPMX19_01767	0.22	-0.0
1,854,001	-		MPMX19_01767	0.22	-0.8
1,854,001	-		MPMX19_01767	0.22	+0.6
1,854,001	-		MPMX19_01767	0.22	-0.0
1,854,001	-		MPMX19_01767	0.22	-0.6
1,854,001	-		MPMX19_01767	0.22	+0.1
1,854,001	-		MPMX19_01767	0.22	-0.5
1,854,001	-		MPMX19_01767	0.22	-0.5
1,854,001	-		MPMX19_01767	0.22	+0.1
1,854,001	-		MPMX19_01767	0.22	+2.6
1,854,001	-		MPMX19_01767	0.22	+1.0
1,854,001	-		MPMX19_01767	0.22	-0.7
1,854,001	-		MPMX19_01767	0.22	+0.6
1,854,001	-		MPMX19_01767	0.22	+0.6
1,854,001	-		MPMX19_01767	0.22	+0.5
1,854,001	-		MPMX19_01767	0.22	-1.8
1,854,001	-		MPMX19_01767	0.22	+0.6
1,854,001	-		MPMX19_01767	0.22	-1.2
1,854,001	-		MPMX19_01767	0.22	-0.3
1,854,001	-		MPMX19_01767	0.22	-0.0
1,854,001	-		MPMX19_01767	0.22	+0.1
1,854,112	+		MPMX19_01767	0.42	+1.3
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1,854,715	+				-0.7