Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01392

Experiment: NL-CCM; low oxygen

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; low oxygen
1,456,573	+				-0.3
1,456,573	+				-0.9
1,456,573	+				+1.3
1,456,574	-				-0.6
1,456,574	-				+0.1
1,456,591	-				-1.6
1,456,591	-				+0.7
1,456,591	-				-1.0
1,456,591	-				+0.5
1,456,657	+				-1.9
1,456,657	+				-0.7
1,456,658	-				-0.5
1,456,741	+				+0.3
1,456,741	+				-0.5
1,456,741	+				-1.1
1,456,741	+				+0.7
1,456,741	+				-0.1
1,456,741	+				+0.1
1,456,741	+				-0.0
1,456,741	+				+0.3
1,456,741	+				-0.5
1,456,742	-				-0.6
1,456,742	-				+0.0
1,456,742	-				-1.0
1,456,742	-				-0.5
1,456,742	-				-0.5
1,456,742	-				+0.4
1,456,742	-				-2.0
1,456,742	-				-0.9
1,456,742	-				-1.5
1,456,742	-				+0.3
1,456,742	-				-0.0
1,456,742	-				-0.5
1,456,742	-				+0.1
1,456,742	-				+0.1
1,456,981	+		MPMX19_01391	0.35	+1.4
1,456,981	+		MPMX19_01391	0.35	+0.3
1,456,981	+		MPMX19_01391	0.35	-0.1
1,456,981	+		MPMX19_01391	0.35	+0.7
1,456,981	+		MPMX19_01391	0.35	+0.8
1,456,981	+		MPMX19_01391	0.35	+0.3
1,456,981	+		MPMX19_01391	0.35	-1.5
1,456,981	+		MPMX19_01391	0.35	+0.3
1,456,981	+		MPMX19_01391	0.35	+0.8
1,456,981	+		MPMX19_01391	0.35	+0.1
1,456,981	+		MPMX19_01391	0.35	+0.3
1,456,981	+		MPMX19_01391	0.35	+0.7
1,456,982	-		MPMX19_01391	0.35	-0.5
1,456,982	-		MPMX19_01391	0.35	-0.7
1,456,982	-		MPMX19_01391	0.35	-0.3
1,456,982	-		MPMX19_01391	0.35	+0.1
1,457,052	+		MPMX19_01391	0.45	-1.2
1,457,053	-		MPMX19_01391	0.45	+0.2
1,457,053	-		MPMX19_01391	0.45	-1.5
1,457,053	-		MPMX19_01391	0.45	+0.7
1,457,678	+				-2.5
1,457,678	+				-1.0
1,457,679	-				+0.4
1,457,996	+		MPMX19_01392	0.22	-0.3
1,457,996	+		MPMX19_01392	0.22	-0.5
1,457,997	-		MPMX19_01392	0.22	-1.5
1,457,997	-		MPMX19_01392	0.22	-1.7
1,457,997	-		MPMX19_01392	0.22	-0.6
1,457,997	-		MPMX19_01392	0.22	-1.5
1,457,997	-		MPMX19_01392	0.22	-1.0
1,457,997	-		MPMX19_01392	0.22	-1.1
1,457,997	-		MPMX19_01392	0.22	+0.1
1,457,997	-		MPMX19_01392	0.22	-1.3
1,458,933	+		MPMX19_01392	0.69	-1.3
1,458,933	+		MPMX19_01392	0.69	-0.3
1,458,934	-		MPMX19_01392	0.69	-1.9
1,459,038	+		MPMX19_01392	0.74	-0.7
1,459,038	+		MPMX19_01392	0.74	-1.1
1,459,038	+		MPMX19_01392	0.74	-0.6
1,459,038	+		MPMX19_01392	0.74	-0.9
1,459,038	+		MPMX19_01392	0.74	+0.7
1,459,038	+		MPMX19_01392	0.74	+0.1
1,459,038	+		MPMX19_01392	0.74	-0.5
1,459,038	+		MPMX19_01392	0.74	-1.1
1,459,038	+		MPMX19_01392	0.74	-0.7
1,459,038	+		MPMX19_01392	0.74	-0.8
1,459,038	+		MPMX19_01392	0.74	+0.1
1,459,038	+		MPMX19_01392	0.74	-0.1
1,459,038	+		MPMX19_01392	0.74	-1.8
1,459,038	+		MPMX19_01392	0.74	-0.6
1,459,038	+		MPMX19_01392	0.74	+1.0
1,459,038	+		MPMX19_01392	0.74	-1.3
1,459,038	+		MPMX19_01392	0.74	-1.5
1,459,038	+		MPMX19_01392	0.74	-0.7
1,459,038	+		MPMX19_01392	0.74	-3.0
1,459,038	+		MPMX19_01392	0.74	-1.1
1,459,038	+		MPMX19_01392	0.74	-0.6
1,459,039	-		MPMX19_01392	0.74	-1.8
1,459,039	-		MPMX19_01392	0.74	-2.0
1,459,039	-		MPMX19_01392	0.74	-1.4
1,459,039	-		MPMX19_01392	0.74	-0.7
1,459,039	-		MPMX19_01392	0.74	-1.3
1,459,039	-		MPMX19_01392	0.74	+0.7
1,459,039	-		MPMX19_01392	0.74	-0.6
1,459,039	-		MPMX19_01392	0.74	-1.3
1,459,039	-		MPMX19_01392	0.74	-1.7
1,459,039	-		MPMX19_01392	0.74	-0.5
1,459,039	-		MPMX19_01392	0.74	-0.5
1,459,039	-		MPMX19_01392	0.74	-2.1
1,459,039	-		MPMX19_01392	0.74	-0.5
1,459,039	-		MPMX19_01392	0.74	-1.3
1,459,039	-		MPMX19_01392	0.74	-0.4
1,459,039	-		MPMX19_01392	0.74	-1.7
1,459,039	-		MPMX19_01392	0.74	-0.8
1,459,039	-		MPMX19_01392	0.74	-0.4
1,459,039	-		MPMX19_01392	0.74	-0.7
1,459,039	-		MPMX19_01392	0.74	+0.1
1,459,039	-		MPMX19_01392	0.74	-1.8
1,459,039	-		MPMX19_01392	0.74	-2.5
1,459,039	-		MPMX19_01392	0.74	-0.5
1,459,083	+		MPMX19_01392	0.76	-0.9
1,459,083	+		MPMX19_01392	0.76	+0.5
1,459,083	+		MPMX19_01392	0.76	-0.8
1,459,083	+		MPMX19_01392	0.76	+0.2
1,459,083	+		MPMX19_01392	0.76	-1.0
1,459,083	+		MPMX19_01392	0.76	-1.2
1,459,083	+		MPMX19_01392	0.76	-1.0
1,459,084	-		MPMX19_01392	0.76	-0.3
1,459,084	-		MPMX19_01392	0.76	-2.0
1,459,084	-		MPMX19_01392	0.76	-0.9
1,459,084	-		MPMX19_01392	0.76	+0.4
1,459,084	-		MPMX19_01392	0.76	-2.7
1,459,092	+		MPMX19_01392	0.77	-0.6
1,459,092	+		MPMX19_01392	0.77	-1.2
1,459,092	+		MPMX19_01392	0.77	-0.4
1,459,092	+		MPMX19_01392	0.77	+1.3
1,459,092	+		MPMX19_01392	0.77	-0.3
1,459,092	+		MPMX19_01392	0.77	-3.0
1,459,092	+		MPMX19_01392	0.77	-2.2
1,459,092	+		MPMX19_01392	0.77	-0.6
1,459,092	+		MPMX19_01392	0.77	+0.1
1,459,092	+		MPMX19_01392	0.77	-0.9
1,459,092	+		MPMX19_01392	0.77	-0.2
1,459,092	+		MPMX19_01392	0.77	-1.1
1,459,092	+		MPMX19_01392	0.77	+0.9
1,459,092	+		MPMX19_01392	0.77	-0.1
1,459,092	+		MPMX19_01392	0.77	+0.5
1,459,092	+		MPMX19_01392	0.77	+0.7
1,459,092	+		MPMX19_01392	0.77	-2.1
1,459,092	+		MPMX19_01392	0.77	+0.5
1,459,092	+		MPMX19_01392	0.77	+0.6
1,459,092	+		MPMX19_01392	0.77	-1.8
1,459,092	+		MPMX19_01392	0.77	-0.9
1,459,093	-		MPMX19_01392	0.77	-1.6
1,459,093	-		MPMX19_01392	0.77	-0.3
1,459,093	-		MPMX19_01392	0.77	-0.5
1,459,093	-		MPMX19_01392	0.77	-1.2
1,459,093	-		MPMX19_01392	0.77	-2.7
1,459,093	-		MPMX19_01392	0.77	-1.2
1,459,093	-		MPMX19_01392	0.77	-0.9
1,459,093	-		MPMX19_01392	0.77	-0.9
1,459,093	-		MPMX19_01392	0.77	+1.1
1,459,093	-		MPMX19_01392	0.77	-1.2
1,459,093	-		MPMX19_01392	0.77	-0.3
1,459,093	-		MPMX19_01392	0.77	-1.2
1,459,093	-		MPMX19_01392	0.77	-0.9
1,459,093	-		MPMX19_01392	0.77	-1.7
1,459,093	-		MPMX19_01392	0.77	-1.2
1,459,093	-		MPMX19_01392	0.77	-1.4
1,459,093	-		MPMX19_01392	0.77	-0.2
1,459,093	-		MPMX19_01392	0.77	-0.1
1,459,095	+		MPMX19_01392	0.77	+1.1
1,459,095	+		MPMX19_01392	0.77	+0.9
1,459,095	+		MPMX19_01392	0.77	-0.3
1,459,095	+		MPMX19_01392	0.77	-0.4
1,459,095	+		MPMX19_01392	0.77	+0.1
1,459,095	+		MPMX19_01392	0.77	-0.6
1,459,095	+		MPMX19_01392	0.77	+0.8
1,459,095	+		MPMX19_01392	0.77	+0.2
1,459,095	+		MPMX19_01392	0.77	+1.0
1,459,095	+		MPMX19_01392	0.77	-1.8
1,459,096	-		MPMX19_01392	0.77	-0.3
1,459,096	-		MPMX19_01392	0.77	-0.3
1,459,096	-		MPMX19_01392	0.77	-1.9
1,459,096	-		MPMX19_01392	0.77	-0.3
1,459,096	-		MPMX19_01392	0.77	-1.8
1,459,096	-		MPMX19_01392	0.77	-2.2
1,459,096	-		MPMX19_01392	0.77	-0.1
1,459,158	+		MPMX19_01392	0.80	-1.6
1,459,159	-		MPMX19_01392	0.80	-0.3
1,459,159	-		MPMX19_01392	0.80	-1.7
1,459,159	-		MPMX19_01392	0.80	-0.6
1,459,159	-		MPMX19_01392	0.80	-2.2
1,459,159	-		MPMX19_01392	0.80	+0.1
1,459,582	+				-0.5
1,459,582	+				-0.9
1,459,582	+				+0.5
1,459,582	+				+0.1
1,459,582	+				+0.5
1,459,582	+				-1.6
1,459,582	+				-0.3
1,459,582	+				-0.3
1,459,582	+				+0.7
1,459,582	+				-2.0
1,459,602	-				+0.3
1,459,612	+				-1.6
1,459,613	-				-1.5
1,459,615	+				-0.9
1,459,616	-				+1.3
1,459,616	-				+0.9
1,459,644	+				-1.4
1,459,650	-				-0.8
1,459,650	-				-1.8
1,459,650	-				-0.6
1,459,961	+		MPMX19_01393	0.47	-0.1
1,460,009	+		MPMX19_01393	0.59	+0.7
1,460,009	+		MPMX19_01393	0.59	-1.1
1,460,010	-		MPMX19_01393	0.59	+0.0
1,460,010	-		MPMX19_01393	0.59	+1.3
1,460,010	-		MPMX19_01393	0.59	+0.6
1,460,010	-		MPMX19_01393	0.59	-0.5
1,460,010	-		MPMX19_01393	0.59	+1.4
1,460,010	-		MPMX19_01393	0.59	-0.5
1,460,010	-		MPMX19_01393	0.59	+0.2
1,460,090	+		MPMX19_01393	0.78	-1.8
1,460,090	+		MPMX19_01393	0.78	-1.9
1,460,090	+		MPMX19_01393	0.78	-1.6
1,460,090	+		MPMX19_01393	0.78	+0.4
1,460,090	+		MPMX19_01393	0.78	-1.1
1,460,090	+		MPMX19_01393	0.78	-0.1
1,460,091	-		MPMX19_01393	0.79	-2.0
1,460,091	-		MPMX19_01393	0.79	-0.8
1,460,091	-		MPMX19_01393	0.79	+1.5
1,460,091	-		MPMX19_01393	0.79	+0.5
1,460,091	-		MPMX19_01393	0.79	-0.5
1,460,091	-		MPMX19_01393	0.79	+0.9
1,460,091	-		MPMX19_01393	0.79	-0.1
1,460,091	-		MPMX19_01393	0.79	-0.3
1,460,476	+		MPMX19_01394	0.43	-1.0
1,460,476	+		MPMX19_01394	0.43	+2.0
1,460,477	-		MPMX19_01394	0.43	-1.9
1,460,477	-		MPMX19_01394	0.43	-0.3