Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF543 and GFF544 are separated by 18 nucleotides GFF544 and GFF545 are separated by 18 nucleotides GFF545 and GFF546 are separated by 150 nucleotides GFF546 and GFF547 are separated by 15 nucleotides
GFF543 - Flagellum-specific ATP synthase, at 600,382 to 601,863
GFF543
GFF544 - Flagellar FliJ protein, at 601,882 to 602,328
GFF544
GFF545 - hypothetical protein, at 602,347 to 603,741
GFF545
GFF546 - hypothetical protein, at 603,892 to 604,506
GFF546
GFF547 - Flagellar motor switch protein FliM, at 604,522 to 605,526
GFF547
Position (kb) 602
603
604 Strain fitness (log2 ratio) -2
-1
0
1 at 601.429 kb on - strand, within GFF543 at 601.471 kb on + strand, within GFF543 at 601.688 kb on - strand, within GFF543 at 601.723 kb on + strand at 601.762 kb on - strand at 601.790 kb on + strand at 601.828 kb on - strand at 601.859 kb on + strand at 601.859 kb on + strand at 601.860 kb on - strand at 601.861 kb on + strand at 601.861 kb on + strand at 601.862 kb on - strand at 601.862 kb on - strand at 601.870 kb on + strand at 601.870 kb on + strand at 601.871 kb on - strand at 602.032 kb on + strand, within GFF544 at 602.054 kb on + strand, within GFF544 at 602.054 kb on + strand, within GFF544 at 602.082 kb on - strand, within GFF544 at 602.082 kb on - strand, within GFF544 at 602.218 kb on + strand, within GFF544 at 602.232 kb on + strand, within GFF544 at 602.327 kb on - strand at 602.327 kb on - strand at 602.330 kb on + strand at 602.358 kb on + strand at 602.358 kb on + strand at 602.359 kb on - strand at 602.397 kb on + strand at 602.506 kb on - strand, within GFF545 at 602.511 kb on + strand, within GFF545 at 602.511 kb on + strand, within GFF545 at 602.638 kb on - strand, within GFF545 at 602.724 kb on + strand, within GFF545 at 602.724 kb on + strand, within GFF545 at 602.725 kb on - strand, within GFF545 at 602.725 kb on - strand, within GFF545 at 602.725 kb on - strand, within GFF545 at 602.751 kb on - strand, within GFF545 at 602.934 kb on + strand, within GFF545 at 602.934 kb on + strand, within GFF545 at 602.935 kb on - strand, within GFF545 at 603.083 kb on + strand, within GFF545 at 603.083 kb on + strand, within GFF545 at 603.083 kb on + strand, within GFF545 at 603.132 kb on + strand, within GFF545 at 603.219 kb on + strand, within GFF545 at 603.219 kb on + strand, within GFF545 at 603.243 kb on - strand, within GFF545 at 603.243 kb on - strand, within GFF545 at 603.357 kb on + strand, within GFF545 at 603.449 kb on + strand, within GFF545 at 603.713 kb on + strand at 603.713 kb on + strand at 603.713 kb on + strand at 603.729 kb on + strand at 603.729 kb on + strand at 603.737 kb on + strand at 603.737 kb on + strand at 603.737 kb on + strand at 603.738 kb on - strand at 603.739 kb on + strand at 603.740 kb on - strand at 603.779 kb on + strand at 603.791 kb on + strand at 603.791 kb on + strand at 603.855 kb on + strand at 603.855 kb on + strand at 603.855 kb on + strand at 603.855 kb on + strand at 603.855 kb on + strand at 603.855 kb on + strand at 603.855 kb on + strand at 603.855 kb on + strand at 603.856 kb on - strand at 603.856 kb on - strand at 603.856 kb on - strand at 603.856 kb on - strand at 603.856 kb on - strand at 603.856 kb on - strand at 603.856 kb on - strand at 603.856 kb on - strand at 603.856 kb on - strand at 603.856 kb on - strand at 603.856 kb on - strand at 603.857 kb on + strand at 603.857 kb on + strand at 603.858 kb on - strand at 603.858 kb on - strand at 603.858 kb on - strand at 603.871 kb on + strand at 603.876 kb on + strand at 603.885 kb on + strand at 603.885 kb on + strand at 603.886 kb on - strand at 604.221 kb on + strand, within GFF546 at 604.335 kb on + strand, within GFF546 at 604.343 kb on + strand, within GFF546 at 604.343 kb on + strand, within GFF546 at 604.343 kb on + strand, within GFF546 at 604.343 kb on + strand, within GFF546 at 604.343 kb on + strand, within GFF546 at 604.344 kb on - strand, within GFF546 at 604.344 kb on - strand, within GFF546 at 604.344 kb on - strand, within GFF546 at 604.486 kb on - strand at 604.504 kb on + strand at 604.633 kb on + strand, within GFF547 at 604.633 kb on + strand, within GFF547 at 604.634 kb on - strand, within GFF547 at 604.634 kb on - strand, within GFF547 at 604.636 kb on - strand, within GFF547 at 604.693 kb on - strand, within GFF547
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 601,429 - GFF543 0.71 +0.2 601,471 + GFF543 0.73 -1.4 601,688 - GFF543 0.88 -2.3 601,723 + +1.2 601,762 - -0.1 601,790 + -0.3 601,828 - +0.2 601,859 + -1.4 601,859 + +0.9 601,860 - -0.7 601,861 + -0.3 601,861 + +0.7 601,862 - -1.4 601,862 - -1.1 601,870 + +0.5 601,870 + -0.9 601,871 - -0.3 602,032 + GFF544 0.34 +0.8 602,054 + GFF544 0.38 -0.9 602,054 + GFF544 0.38 +0.4 602,082 - GFF544 0.45 -0.5 602,082 - GFF544 0.45 +0.9 602,218 + GFF544 0.75 -0.9 602,232 + GFF544 0.78 -0.3 602,327 - -2.3 602,327 - -0.4 602,330 + -0.1 602,358 + +0.6 602,358 + -2.1 602,359 - +0.4 602,397 + +0.3 602,506 - GFF545 0.11 -0.5 602,511 + GFF545 0.12 -0.5 602,511 + GFF545 0.12 +0.7 602,638 - GFF545 0.21 -1.1 602,724 + GFF545 0.27 -1.1 602,724 + GFF545 0.27 -0.1 602,725 - GFF545 0.27 +0.6 602,725 - GFF545 0.27 -0.1 602,725 - GFF545 0.27 -0.6 602,751 - GFF545 0.29 +0.5 602,934 + GFF545 0.42 +0.2 602,934 + GFF545 0.42 +0.8 602,935 - GFF545 0.42 +0.5 603,083 + GFF545 0.53 -0.4 603,083 + GFF545 0.53 +0.7 603,083 + GFF545 0.53 +0.6 603,132 + GFF545 0.56 -1.4 603,219 + GFF545 0.63 -0.1 603,219 + GFF545 0.63 -0.1 603,243 - GFF545 0.64 -1.2 603,243 - GFF545 0.64 +0.6 603,357 + GFF545 0.72 -1.1 603,449 + GFF545 0.79 +1.1 603,713 + -0.7 603,713 + -0.2 603,713 + -1.1 603,729 + -0.1 603,729 + +0.9 603,737 + +1.7 603,737 + -0.6 603,737 + -0.7 603,738 - -1.4 603,739 + -0.3 603,740 - +0.0 603,779 + -1.0 603,791 + -0.2 603,791 + -0.6 603,855 + -0.5 603,855 + -0.9 603,855 + -0.4 603,855 + +1.0 603,855 + -2.5 603,855 + -0.3 603,855 + -0.2 603,855 + +0.6 603,856 - +0.4 603,856 - -0.1 603,856 - +0.9 603,856 - +0.5 603,856 - -0.7 603,856 - -0.2 603,856 - +0.4 603,856 - +0.1 603,856 - +0.2 603,856 - -0.1 603,856 - +1.1 603,857 + -0.4 603,857 + +1.3 603,858 - -1.1 603,858 - +0.6 603,858 - -0.4 603,871 + -0.9 603,876 + -1.1 603,885 + -1.1 603,885 + +0.4 603,886 - +0.3 604,221 + GFF546 0.53 +0.2 604,335 + GFF546 0.72 -1.4 604,343 + GFF546 0.73 +0.1 604,343 + GFF546 0.73 -1.4 604,343 + GFF546 0.73 -1.1 604,343 + GFF546 0.73 -0.3 604,343 + GFF546 0.73 -0.1 604,344 - GFF546 0.73 +0.7 604,344 - GFF546 0.73 -0.8 604,344 - GFF546 0.73 -0.5 604,486 - +1.6 604,504 + -0.2 604,633 + GFF547 0.11 -0.4 604,633 + GFF547 0.11 -0.7 604,634 - GFF547 0.11 -0.1 604,634 - GFF547 0.11 +0.2 604,636 - GFF547 0.11 -1.1 604,693 - GFF547 0.17 -1.5
Or see this region's nucleotide sequence