Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_01245 and GEMAOFIL_01246 are separated by 154 nucleotides GEMAOFIL_01246 and GEMAOFIL_01247 are separated by 51 nucleotides GEMAOFIL_01247 and GEMAOFIL_01248 are separated by 141 nucleotides
GEMAOFIL_01245: GEMAOFIL_01245 - GTPase Era, at 1,401,365 to 1,402,267
_01245
GEMAOFIL_01246: GEMAOFIL_01246 - DNA repair protein RecO, at 1,402,422 to 1,403,108
_01246
GEMAOFIL_01247: GEMAOFIL_01247 - 'Pyridoxine 5'-phosphate synthase' transl_table=11, at 1,403,160 to 1,403,903
_01247
GEMAOFIL_01248: GEMAOFIL_01248 - Multicopper oxidase MmcO, at 1,404,045 to 1,405,427
_01248
Position (kb)
1402
1403
1404 Strain fitness (log2 ratio)
-1
0
1 at 1402.265 kb on + strand at 1402.266 kb on - strand at 1402.327 kb on - strand at 1402.345 kb on - strand at 1402.345 kb on - strand at 1402.345 kb on - strand at 1402.350 kb on + strand at 1402.453 kb on - strand at 1402.559 kb on + strand, within GEMAOFIL_01246 at 1402.845 kb on + strand, within GEMAOFIL_01246 at 1402.846 kb on - strand, within GEMAOFIL_01246 at 1402.902 kb on + strand, within GEMAOFIL_01246 at 1402.903 kb on - strand, within GEMAOFIL_01246 at 1402.903 kb on - strand, within GEMAOFIL_01246 at 1403.119 kb on + strand at 1403.119 kb on + strand at 1403.119 kb on + strand at 1403.120 kb on - strand at 1403.120 kb on - strand at 1403.120 kb on - strand at 1403.901 kb on + strand at 1403.976 kb on + strand at 1403.991 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 1,402,265 + +0.1 1,402,266 - -0.2 1,402,327 - +1.0 1,402,345 - +0.1 1,402,345 - +0.3 1,402,345 - +0.3 1,402,350 + -0.1 1,402,453 - -0.9 1,402,559 + GEMAOFIL_01246 0.20 -0.7 1,402,845 + GEMAOFIL_01246 0.62 -1.1 1,402,846 - GEMAOFIL_01246 0.62 +0.1 1,402,902 + GEMAOFIL_01246 0.70 -0.3 1,402,903 - GEMAOFIL_01246 0.70 -0.5 1,402,903 - GEMAOFIL_01246 0.70 -0.8 1,403,119 + -0.5 1,403,119 + +0.2 1,403,119 + -0.5 1,403,120 - -0.2 1,403,120 - -0.3 1,403,120 - +0.2 1,403,901 + -0.3 1,403,976 + -0.2 1,403,991 + +0.3
Or see this region's nucleotide sequence