Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GEMAOFIL_00727 and GEMAOFIL_00728 are separated by 109 nucleotides GEMAOFIL_00728 and GEMAOFIL_00729 are separated by 175 nucleotides GEMAOFIL_00729 and GEMAOFIL_00730 overlap by 4 nucleotides
GEMAOFIL_00727: GEMAOFIL_00727 - Small ribosomal subunit biogenesis GTPase RsgA, at 849,924 to 850,955
_00727
GEMAOFIL_00728: GEMAOFIL_00728 - Oligoribonuclease, at 851,065 to 851,607
_00728
GEMAOFIL_00729: GEMAOFIL_00729 - hypothetical protein, at 851,783 to 852,397
_00729
GEMAOFIL_00730: GEMAOFIL_00730 - Epoxyqueuosine reductase, at 852,394 to 853,458
_00730
Position (kb) 851
852
853 Strain fitness (log2 ratio) -2
-1
0
1
2 at 851.037 kb on + strand at 851.704 kb on - strand at 851.705 kb on + strand at 851.705 kb on + strand at 851.706 kb on - strand at 851.706 kb on - strand at 851.706 kb on - strand at 851.706 kb on - strand at 851.709 kb on + strand at 851.709 kb on + strand at 851.710 kb on - strand at 851.710 kb on - strand at 851.723 kb on - strand at 851.767 kb on + strand at 851.767 kb on + strand at 851.767 kb on + strand at 851.798 kb on + strand at 851.799 kb on - strand at 851.799 kb on - strand at 851.970 kb on - strand, within GEMAOFIL_00729 at 851.970 kb on - strand, within GEMAOFIL_00729 at 852.224 kb on + strand, within GEMAOFIL_00729 at 852.225 kb on - strand, within GEMAOFIL_00729 at 852.257 kb on + strand, within GEMAOFIL_00729 at 852.257 kb on + strand, within GEMAOFIL_00729 at 852.258 kb on - strand, within GEMAOFIL_00729 at 852.258 kb on - strand, within GEMAOFIL_00729 at 852.258 kb on - strand, within GEMAOFIL_00729 at 852.327 kb on + strand, within GEMAOFIL_00729 at 852.607 kb on - strand, within GEMAOFIL_00730 at 852.639 kb on + strand, within GEMAOFIL_00730 at 852.639 kb on + strand, within GEMAOFIL_00730 at 852.788 kb on + strand, within GEMAOFIL_00730 at 852.789 kb on - strand, within GEMAOFIL_00730 at 852.913 kb on + strand, within GEMAOFIL_00730 at 852.944 kb on + strand, within GEMAOFIL_00730 at 853.128 kb on - strand, within GEMAOFIL_00730 at 853.154 kb on - strand, within GEMAOFIL_00730 at 853.155 kb on + strand, within GEMAOFIL_00730 at 853.156 kb on - strand, within GEMAOFIL_00730 at 853.157 kb on + strand, within GEMAOFIL_00730 at 853.157 kb on + strand, within GEMAOFIL_00730 at 853.157 kb on + strand, within GEMAOFIL_00730 at 853.157 kb on + strand, within GEMAOFIL_00730 at 853.158 kb on - strand, within GEMAOFIL_00730 at 853.211 kb on + strand, within GEMAOFIL_00730 at 853.211 kb on + strand, within GEMAOFIL_00730 at 853.295 kb on + strand, within GEMAOFIL_00730 at 853.296 kb on - strand, within GEMAOFIL_00730 at 853.296 kb on - strand, within GEMAOFIL_00730 at 853.296 kb on - strand, within GEMAOFIL_00730 at 853.296 kb on - strand, within GEMAOFIL_00730
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 851,037 + -0.6 851,704 - +2.4 851,705 + +0.2 851,705 + +0.6 851,706 - -0.2 851,706 - +1.0 851,706 - -0.2 851,706 - -0.1 851,709 + -0.7 851,709 + -1.8 851,710 - -0.4 851,710 - +0.4 851,723 - -0.3 851,767 + -0.1 851,767 + +0.2 851,767 + -0.7 851,798 + +0.5 851,799 - +0.1 851,799 - +0.1 851,970 - GEMAOFIL_00729 0.30 +0.3 851,970 - GEMAOFIL_00729 0.30 +0.3 852,224 + GEMAOFIL_00729 0.72 +0.3 852,225 - GEMAOFIL_00729 0.72 +0.4 852,257 + GEMAOFIL_00729 0.77 +1.2 852,257 + GEMAOFIL_00729 0.77 +0.2 852,258 - GEMAOFIL_00729 0.77 +0.2 852,258 - GEMAOFIL_00729 0.77 +0.5 852,258 - GEMAOFIL_00729 0.77 -0.1 852,327 + GEMAOFIL_00729 0.88 +0.2 852,607 - GEMAOFIL_00730 0.20 +0.7 852,639 + GEMAOFIL_00730 0.23 -0.2 852,639 + GEMAOFIL_00730 0.23 +0.3 852,788 + GEMAOFIL_00730 0.37 -0.3 852,789 - GEMAOFIL_00730 0.37 -0.1 852,913 + GEMAOFIL_00730 0.49 -0.8 852,944 + GEMAOFIL_00730 0.52 -0.0 853,128 - GEMAOFIL_00730 0.69 +0.3 853,154 - GEMAOFIL_00730 0.71 +0.9 853,155 + GEMAOFIL_00730 0.71 -0.1 853,156 - GEMAOFIL_00730 0.72 +0.2 853,157 + GEMAOFIL_00730 0.72 +0.9 853,157 + GEMAOFIL_00730 0.72 -0.4 853,157 + GEMAOFIL_00730 0.72 +0.2 853,157 + GEMAOFIL_00730 0.72 +0.9 853,158 - GEMAOFIL_00730 0.72 -0.3 853,211 + GEMAOFIL_00730 0.77 +0.2 853,211 + GEMAOFIL_00730 0.77 -0.2 853,295 + GEMAOFIL_00730 0.85 -0.2 853,296 - GEMAOFIL_00730 0.85 -0.3 853,296 - GEMAOFIL_00730 0.85 -0.4 853,296 - GEMAOFIL_00730 0.85 -0.5 853,296 - GEMAOFIL_00730 0.85 -0.1
Or see this region's nucleotide sequence